BLASTX nr result

ID: Coptis21_contig00003598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003598
         (1569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]   624   e-176
ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni...   623   e-176
emb|CBI17547.3| unnamed protein product [Vitis vinifera]              623   e-176
ref|XP_002327819.1| predicted protein [Populus trichocarpa] gi|2...   615   e-173
ref|XP_002310209.1| predicted protein [Populus trichocarpa] gi|2...   606   e-171

>emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
          Length = 565

 Score =  624 bits (1609), Expect = e-176
 Identities = 316/385 (82%), Positives = 337/385 (87%), Gaps = 1/385 (0%)
 Frame = -2

Query: 1568 AGQMTGIPPVIPGMFPAMFPVTTGQFG-LPVMPVQAMTQQATRHARRVYVGGLSPTANEQ 1392
            AGQ+ G  P IPGMFP MFP+ +GQFG LPVMPVQAMTQQATRHARRVYVGGLSPTANEQ
Sbjct: 186  AGQIPGTTPTIPGMFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQ 245

Query: 1391 SVATYFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 1212
            SVAT+FSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA
Sbjct: 246  SVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 305

Query: 1211 PVKVRRPSDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTES 1032
            PVKVRRPSDYNPSLAA LGPSQPNPNLNL AVGLTPGSAGGLEGPDRIFVGGLPYYFTE+
Sbjct: 306  PVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEA 365

Query: 1031 QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVR 852
            QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVR
Sbjct: 366  QIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVR 425

Query: 851  RANQGTVQPKPEQESXXXXXXXXXXXXXXXXXAGALQAGPVPTKVVCLTQMVNVDELKVV 672
            RANQG  QPKPEQE+                  GAL      TKVVCLTQ+VN DEL+  
Sbjct: 426  RANQGASQPKPEQENVLLHAQQQIALQRLMFQPGAL-----ATKVVCLTQVVNADELQDD 480

Query: 671  EEYDDIMEDVRTEGEKYGDLVSVIIPRPGPNGELSPGVGKVFLEYSDTDGAAKARQGLNG 492
            E Y+DI+ED+R EG K+G+LV+V IPRP PNGE +PG+GKVFLEY+D DGA KAR GLNG
Sbjct: 481  EAYEDIVEDMRIEGGKFGNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGAXKARTGLNG 540

Query: 491  RKFDGNVVVAVYYPEDKFSEGDYDG 417
            RKFDGN VVAV+YPE+KFS+G+YDG
Sbjct: 541  RKFDGNQVVAVFYPENKFSQGEYDG 565


>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis vinifera]
          Length = 568

 Score =  623 bits (1606), Expect = e-176
 Identities = 315/384 (82%), Positives = 336/384 (87%), Gaps = 1/384 (0%)
 Frame = -2

Query: 1565 GQMTGIPPVIPGMFPAMFPVTTGQFG-LPVMPVQAMTQQATRHARRVYVGGLSPTANEQS 1389
            GQ+ G  P IPGMFP MFP+ +GQFG LPVMPVQAMTQQATRHARRVYVGGLSPTANEQS
Sbjct: 190  GQIPGTTPTIPGMFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQS 249

Query: 1388 VATYFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 1209
            VAT+FSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP
Sbjct: 250  VATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 309

Query: 1208 VKVRRPSDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTESQ 1029
            VKVRRPSDYNPSLAA LGPSQPNPNLNL AVGLTPGSAGGLEGPDRIFVGGLPYYFTE+Q
Sbjct: 310  VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 369

Query: 1028 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 849
            IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR
Sbjct: 370  IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 429

Query: 848  ANQGTVQPKPEQESXXXXXXXXXXXXXXXXXAGALQAGPVPTKVVCLTQMVNVDELKVVE 669
            ANQG  QPKPEQE+                  GAL      TKVVCLTQ+VN DEL+  E
Sbjct: 430  ANQGASQPKPEQENVLLHAQQQIALQRLMFQPGAL-----ATKVVCLTQVVNADELQDDE 484

Query: 668  EYDDIMEDVRTEGEKYGDLVSVIIPRPGPNGELSPGVGKVFLEYSDTDGAAKARQGLNGR 489
             Y+DI+ED+R EG K+G+LV+V IPRP PNGE +PG+GKVFLEY+D DGA KAR GLNGR
Sbjct: 485  AYEDIVEDMRIEGGKFGNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGATKARTGLNGR 544

Query: 488  KFDGNVVVAVYYPEDKFSEGDYDG 417
            KFDGN VVAV+YPE+KFS+G+YDG
Sbjct: 545  KFDGNQVVAVFYPENKFSQGEYDG 568


>emb|CBI17547.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  623 bits (1606), Expect = e-176
 Identities = 315/384 (82%), Positives = 336/384 (87%), Gaps = 1/384 (0%)
 Frame = -2

Query: 1565 GQMTGIPPVIPGMFPAMFPVTTGQFG-LPVMPVQAMTQQATRHARRVYVGGLSPTANEQS 1389
            GQ+ G  P IPGMFP MFP+ +GQFG LPVMPVQAMTQQATRHARRVYVGGLSPTANEQS
Sbjct: 15   GQIPGTTPTIPGMFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQS 74

Query: 1388 VATYFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 1209
            VAT+FSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP
Sbjct: 75   VATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 134

Query: 1208 VKVRRPSDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTESQ 1029
            VKVRRPSDYNPSLAA LGPSQPNPNLNL AVGLTPGSAGGLEGPDRIFVGGLPYYFTE+Q
Sbjct: 135  VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 194

Query: 1028 IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 849
            IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR
Sbjct: 195  IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 254

Query: 848  ANQGTVQPKPEQESXXXXXXXXXXXXXXXXXAGALQAGPVPTKVVCLTQMVNVDELKVVE 669
            ANQG  QPKPEQE+                  GAL      TKVVCLTQ+VN DEL+  E
Sbjct: 255  ANQGASQPKPEQENVLLHAQQQIALQRLMFQPGAL-----ATKVVCLTQVVNADELQDDE 309

Query: 668  EYDDIMEDVRTEGEKYGDLVSVIIPRPGPNGELSPGVGKVFLEYSDTDGAAKARQGLNGR 489
             Y+DI+ED+R EG K+G+LV+V IPRP PNGE +PG+GKVFLEY+D DGA KAR GLNGR
Sbjct: 310  AYEDIVEDMRIEGGKFGNLVNVAIPRPKPNGEPTPGLGKVFLEYADIDGATKARTGLNGR 369

Query: 488  KFDGNVVVAVYYPEDKFSEGDYDG 417
            KFDGN VVAV+YPE+KFS+G+YDG
Sbjct: 370  KFDGNQVVAVFYPENKFSQGEYDG 393


>ref|XP_002327819.1| predicted protein [Populus trichocarpa] gi|222836904|gb|EEE75297.1|
            predicted protein [Populus trichocarpa]
          Length = 541

 Score =  615 bits (1586), Expect = e-173
 Identities = 313/385 (81%), Positives = 338/385 (87%), Gaps = 2/385 (0%)
 Frame = -2

Query: 1568 AGQMTGIPPVIPGMFPAMFPV-TTGQFG-LPVMPVQAMTQQATRHARRVYVGGLSPTANE 1395
            +GQ+ G  P IPGMFP MFP+ T+ QFG LPVMPVQAMTQQATRHARRVYVGGL PTANE
Sbjct: 157  SGQIAGTTPPIPGMFPNMFPLGTSQQFGALPVMPVQAMTQQATRHARRVYVGGLPPTANE 216

Query: 1394 QSVATYFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 1215
            QSVAT+FSQVM+AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG
Sbjct: 217  QSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 276

Query: 1214 APVKVRRPSDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 1035
            APVKVRRPSDYNPSLAA LGPSQPNPNLNL AVGL PGSAGGLEGPDRIFVGGLPYYFTE
Sbjct: 277  APVKVRRPSDYNPSLAATLGPSQPNPNLNLSAVGLAPGSAGGLEGPDRIFVGGLPYYFTE 336

Query: 1034 SQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 855
            SQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV
Sbjct: 337  SQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 396

Query: 854  RRANQGTVQPKPEQESXXXXXXXXXXXXXXXXXAGALQAGPVPTKVVCLTQMVNVDELKV 675
            RRANQGT QPKPEQE+                     Q  PVPTKVVCLTQ+V  DELK 
Sbjct: 397  RRANQGTNQPKPEQENVLLHAQQQIALQRLMLQPQP-QQQPVPTKVVCLTQVVTGDELKD 455

Query: 674  VEEYDDIMEDVRTEGEKYGDLVSVIIPRPGPNGELSPGVGKVFLEYSDTDGAAKARQGLN 495
             +EY+DI+ED+RTE  K+G LV+V+IPRP PNGE +PGVGKVFLEY+DT+G++KAR G+N
Sbjct: 456  DDEYEDILEDMRTEAGKFGLLVNVVIPRPRPNGENAPGVGKVFLEYADTEGSSKARAGMN 515

Query: 494  GRKFDGNVVVAVYYPEDKFSEGDYD 420
            GRKFDGN VVAV+YPE+KFS+G+YD
Sbjct: 516  GRKFDGNQVVAVFYPENKFSQGEYD 540


>ref|XP_002310209.1| predicted protein [Populus trichocarpa] gi|222853112|gb|EEE90659.1|
            predicted protein [Populus trichocarpa]
          Length = 394

 Score =  606 bits (1562), Expect = e-171
 Identities = 309/385 (80%), Positives = 335/385 (87%), Gaps = 2/385 (0%)
 Frame = -2

Query: 1568 AGQMTGIPPVIPGMFPAMFPVTTGQ-FG-LPVMPVQAMTQQATRHARRVYVGGLSPTANE 1395
            A  +TG  P IPGMFP MFP+ TGQ FG LPVMPVQAMTQQATRHARRVYVGGL P ANE
Sbjct: 14   AAAITGTTPPIPGMFPNMFPLGTGQQFGALPVMPVQAMTQQATRHARRVYVGGLPPIANE 73

Query: 1394 QSVATYFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 1215
            QSVAT+FSQVM+AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG
Sbjct: 74   QSVATFFSQVMAAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEG 133

Query: 1214 APVKVRRPSDYNPSLAAALGPSQPNPNLNLGAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 1035
            APVKVRRPSDYNPSLAA LGPSQPNPNLNL AVGLTPGSAGGLEGPDRIFVGGLPYYFTE
Sbjct: 134  APVKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTE 193

Query: 1034 SQIRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 855
            +QIRELLESFG LRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV
Sbjct: 194  AQIRELLESFGALRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTV 253

Query: 854  RRANQGTVQPKPEQESXXXXXXXXXXXXXXXXXAGALQAGPVPTKVVCLTQMVNVDELKV 675
            RRANQGT QPKPEQE+                    LQ  PV TKVVCLTQ+V VDELK 
Sbjct: 254  RRANQGTNQPKPEQENVLLHAQQQIALQRL-----MLQPPPVVTKVVCLTQVVTVDELKD 308

Query: 674  VEEYDDIMEDVRTEGEKYGDLVSVIIPRPGPNGELSPGVGKVFLEYSDTDGAAKARQGLN 495
             +EY+DI+ED+R E  K+G LV+V+IPRP P+GE +PGVGKVFLEY+DT+G++KAR G+N
Sbjct: 309  DDEYEDILEDIRMEAGKFGQLVNVVIPRPRPDGENAPGVGKVFLEYADTEGSSKARAGMN 368

Query: 494  GRKFDGNVVVAVYYPEDKFSEGDYD 420
            GRKF GN VVAV++PE+KFS+G+YD
Sbjct: 369  GRKFGGNHVVAVFFPENKFSQGEYD 393


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