BLASTX nr result
ID: Coptis21_contig00003596
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00003596
(2404 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002512938.1| bifunctional dihydrofolate reductase-thymidy... 857 0.0
ref|XP_002280254.1| PREDICTED: bifunctional dihydrofolate reduct... 856 0.0
ref|XP_003537861.1| PREDICTED: bifunctional dihydrofolate reduct... 848 0.0
ref|XP_002306118.1| dihydrofolate reductase-thymidylate synthase... 848 0.0
ref|NP_001238644.1| bifunctional dihydrofolate reductase-thymidy... 848 0.0
>ref|XP_002512938.1| bifunctional dihydrofolate reductase-thymidylate synthase, putative
[Ricinus communis] gi|223547949|gb|EEF49441.1|
bifunctional dihydrofolate reductase-thymidylate
synthase, putative [Ricinus communis]
Length = 528
Score = 857 bits (2215), Expect = 0.0
Identities = 411/528 (77%), Positives = 473/528 (89%), Gaps = 3/528 (0%)
Frame = +3
Query: 297 MSGGT--NVVNGDSHMGPRT-RRTYQVVVAATPSMGIGKDGKLPWRLPSDLNFFKEVTMT 467
M+G T N+ NG++++ RRTYQVVVAAT MGIGKDGKLPWRLPSDL FFK+VT+T
Sbjct: 1 MAGDTKANLSNGNANIEQHDPRRTYQVVVAATRDMGIGKDGKLPWRLPSDLKFFKDVTLT 60
Query: 468 TSELGKTNAVIMGRKTWESIPQKYRPLPGRLNVVLTRSGSSDIASAENVVVCGGLASALD 647
T++ GK NAVIMGRKTWESIP ++RPLPGRLNVVLTRSGS DIA+AENVV+CG ASAL+
Sbjct: 61 TTDSGKKNAVIMGRKTWESIPLEHRPLPGRLNVVLTRSGSFDIATAENVVMCGSFASALE 120
Query: 648 ILAGPPYCLSIEKVFVIGGGQIFSEALNAPECEAIHITEIETNIECDTFMPSIDSKHFRL 827
+LA PYCLSIEKV+VIGGGQI EALNAP C+A+HITEIET+ +CDTF+P+IDS F
Sbjct: 121 LLAASPYCLSIEKVYVIGGGQILREALNAPGCDAVHITEIETSFDCDTFIPAIDSSIFHP 180
Query: 828 WYSSFPLVQDNIRHSFATYIRVRSSAAESISLENGLTFDNSSESSKFEIENFSFLPKIVF 1007
WY SFP+V++NIR+SFATY+RVRSSA ES ++GL+ ++SSE+SKF+++ FSFLPK+VF
Sbjct: 181 WYLSFPMVENNIRYSFATYVRVRSSAVESNGHDSGLSSESSSENSKFDVKKFSFLPKMVF 240
Query: 1008 ERHEEYTYLKLVQDIILNGTQKSDRTETGTLSKFGCQMRFNLRKYFPLLTTKRVFWRGVV 1187
+RHEE+ YL+LVQ+II +G K DRT TGTLSKFGCQ+RFNLRK FPLLTTK+VFWRGVV
Sbjct: 241 DRHEEFLYLRLVQEIISDGILKDDRTGTGTLSKFGCQVRFNLRKTFPLLTTKKVFWRGVV 300
Query: 1188 EELLWFISGSTNSKVLQEKGIHIWDGNSSREYLDSIGLVDREEGDLGPVYGFQWRHFGAS 1367
EELLWFISGSTN+KVLQEKGIHIWDGN+SR+YLDSIGL +REEGDLGPVYGFQWRHFGA
Sbjct: 301 EELLWFISGSTNAKVLQEKGIHIWDGNASRDYLDSIGLKNREEGDLGPVYGFQWRHFGAR 360
Query: 1368 YTNMHANYNGQGFDQLLDVVNKIRNTPDDRRIVLSAWNPSDLKLMALPPCHMFAQFYVAN 1547
YT+MHA+Y GQGFDQLLDVVNKI+N PDDRRI+LSAWNPSDLKLMALPPCHMFAQFYVAN
Sbjct: 361 YTDMHADYTGQGFDQLLDVVNKIKNNPDDRRIILSAWNPSDLKLMALPPCHMFAQFYVAN 420
Query: 1548 GELSCQMYQRSADMGLGVPFNIASYSLLTCMIAHVCDLVPGDFVHVVGDAHVYKNHTRPL 1727
GELSCQMYQRSADMGLGVPFNIASY LLTC+IAHVCDLVPGDFVHV+GD HVY+ H RPL
Sbjct: 421 GELSCQMYQRSADMGLGVPFNIASYGLLTCIIAHVCDLVPGDFVHVIGDTHVYRTHVRPL 480
Query: 1728 SEQLQKHPKPFPMLKINPLKKDIDSFVISDFELMGYNPHQKIEMKMAV 1871
EQLQK PKPFP+LKINP KK+IDSFV +DF+L+GY+PH KIEMKMAV
Sbjct: 481 QEQLQKLPKPFPILKINPEKKNIDSFVAADFKLIGYDPHHKIEMKMAV 528
>ref|XP_002280254.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate
synthase-like [Vitis vinifera]
Length = 524
Score = 856 bits (2211), Expect = 0.0
Identities = 407/517 (78%), Positives = 464/517 (89%)
Frame = +3
Query: 321 NGDSHMGPRTRRTYQVVVAATPSMGIGKDGKLPWRLPSDLNFFKEVTMTTSELGKTNAVI 500
NG++++ P +RTYQVVVAAT MGIGKDGKLPWRLPSD+ FK++TMT ++ K NAVI
Sbjct: 11 NGNANIQPDPQRTYQVVVAATRDMGIGKDGKLPWRLPSDMKIFKDITMTVADTVKKNAVI 70
Query: 501 MGRKTWESIPQKYRPLPGRLNVVLTRSGSSDIASAENVVVCGGLASALDILAGPPYCLSI 680
MGRKTWESIP ++RPLPGRLNVVLTRSGS DIA+AENVV+CG +ASAL++LA PYCLSI
Sbjct: 71 MGRKTWESIPLEHRPLPGRLNVVLTRSGSFDIATAENVVICGSMASALELLAASPYCLSI 130
Query: 681 EKVFVIGGGQIFSEALNAPECEAIHITEIETNIECDTFMPSIDSKHFRLWYSSFPLVQDN 860
EKVFVIGGGQI EALNAP C+AIHITEIET+ ECDTF+P+IDS F+ WYSSFPLV++N
Sbjct: 131 EKVFVIGGGQILREALNAPGCDAIHITEIETSFECDTFIPAIDSLVFQPWYSSFPLVENN 190
Query: 861 IRHSFATYIRVRSSAAESISLENGLTFDNSSESSKFEIENFSFLPKIVFERHEEYTYLKL 1040
IR+SF TY+RVRSSA ES NG D+ ES KFE++ FSFLPK++FERHEEY YL+L
Sbjct: 191 IRYSFMTYVRVRSSADESQIQNNG---DSGLESIKFEVKKFSFLPKMIFERHEEYIYLRL 247
Query: 1041 VQDIILNGTQKSDRTETGTLSKFGCQMRFNLRKYFPLLTTKRVFWRGVVEELLWFISGST 1220
V+DII NG Q+ DRT TGTLSKFGCQMRFNLRK FPLLTTK+VFWRGVVEELLWFISGST
Sbjct: 248 VEDIISNGVQRDDRTGTGTLSKFGCQMRFNLRKTFPLLTTKKVFWRGVVEELLWFISGST 307
Query: 1221 NSKVLQEKGIHIWDGNSSREYLDSIGLVDREEGDLGPVYGFQWRHFGASYTNMHANYNGQ 1400
N+KVLQEKGIHIWDGN+SR+YLDSIGL DREEGDLGP+YGFQWRHFGASY +MHA+Y GQ
Sbjct: 308 NAKVLQEKGIHIWDGNASRDYLDSIGLADREEGDLGPIYGFQWRHFGASYIDMHADYTGQ 367
Query: 1401 GFDQLLDVVNKIRNTPDDRRIVLSAWNPSDLKLMALPPCHMFAQFYVANGELSCQMYQRS 1580
GFDQLLDV+NKI+N P+DRRI+LSAWNPSDLKLMALPPCHMFAQFYV++GELSCQMYQRS
Sbjct: 368 GFDQLLDVINKIKNNPNDRRIILSAWNPSDLKLMALPPCHMFAQFYVSHGELSCQMYQRS 427
Query: 1581 ADMGLGVPFNIASYSLLTCMIAHVCDLVPGDFVHVVGDAHVYKNHTRPLSEQLQKHPKPF 1760
ADMGLGVPFNIASY+LLTCMIAHVCDLVPGDF+HV+GD+HVY H RPL EQLQK PKPF
Sbjct: 428 ADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDSHVYLTHIRPLQEQLQKLPKPF 487
Query: 1761 PMLKINPLKKDIDSFVISDFELMGYNPHQKIEMKMAV 1871
P+LKINP KK+IDSFV +DF+L+GY+PHQKIEMKMAV
Sbjct: 488 PILKINPQKKNIDSFVAADFQLIGYDPHQKIEMKMAV 524
>ref|XP_003537861.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate
synthase-like [Glycine max]
Length = 528
Score = 848 bits (2191), Expect = 0.0
Identities = 399/517 (77%), Positives = 456/517 (88%)
Frame = +3
Query: 321 NGDSHMGPRTRRTYQVVVAATPSMGIGKDGKLPWRLPSDLNFFKEVTMTTSELGKTNAVI 500
NG+S P +RTYQ VV AT MGI KD KLPW LP+DLNFF+E+T TTS+ GK NAV+
Sbjct: 12 NGNSKSEPHPQRTYQAVVVATRDMGISKDEKLPWTLPTDLNFFEEITTTTSDPGKKNAVV 71
Query: 501 MGRKTWESIPQKYRPLPGRLNVVLTRSGSSDIASAENVVVCGGLASALDILAGPPYCLSI 680
MGRKTWESIP + RPLPGRLNVVLTRSGS DIA+AENV++CG ++SA+++LA PYCLSI
Sbjct: 72 MGRKTWESIPPENRPLPGRLNVVLTRSGSFDIATAENVLICGSVSSAMELLASSPYCLSI 131
Query: 681 EKVFVIGGGQIFSEALNAPECEAIHITEIETNIECDTFMPSIDSKHFRLWYSSFPLVQDN 860
EKVF+ GGG+IF EALNAP CEA HITEIE +IECDTFMP +++ F+ WYSSFPLV+DN
Sbjct: 132 EKVFLTGGGEIFREALNAPGCEAAHITEIEASIECDTFMPRVNTSVFQTWYSSFPLVEDN 191
Query: 861 IRHSFATYIRVRSSAAESISLENGLTFDNSSESSKFEIENFSFLPKIVFERHEEYTYLKL 1040
+R+SF TY+RVRS ES FDN+S++ KFE++ FSFLPK+V+ERHEE+ YL+L
Sbjct: 192 LRYSFTTYVRVRSFPPESPDQNADPFFDNNSDALKFEVKKFSFLPKMVYERHEEFKYLRL 251
Query: 1041 VQDIILNGTQKSDRTETGTLSKFGCQMRFNLRKYFPLLTTKRVFWRGVVEELLWFISGST 1220
VQ+II GT K DRT TGTLSKFGCQMRFNLR+ FPLLTTK+VFWRGV+EELLWFISGST
Sbjct: 252 VQEIISEGTTKDDRTGTGTLSKFGCQMRFNLRRNFPLLTTKKVFWRGVIEELLWFISGST 311
Query: 1221 NSKVLQEKGIHIWDGNSSREYLDSIGLVDREEGDLGPVYGFQWRHFGASYTNMHANYNGQ 1400
++KVLQEKGIHIWDGN+SREYLDSIGL DREEGDLGPVYGFQWRHFGA YT+MHA+Y+GQ
Sbjct: 312 SAKVLQEKGIHIWDGNASREYLDSIGLTDREEGDLGPVYGFQWRHFGAKYTDMHADYSGQ 371
Query: 1401 GFDQLLDVVNKIRNTPDDRRIVLSAWNPSDLKLMALPPCHMFAQFYVANGELSCQMYQRS 1580
GFDQLLDV+NKI++ PDDRRI+LSAWNPSDLKLMALPPCHMFAQFYVANGELSCQMYQRS
Sbjct: 372 GFDQLLDVINKIKHNPDDRRIILSAWNPSDLKLMALPPCHMFAQFYVANGELSCQMYQRS 431
Query: 1581 ADMGLGVPFNIASYSLLTCMIAHVCDLVPGDFVHVVGDAHVYKNHTRPLSEQLQKHPKPF 1760
ADMGLGVPFNIASY+LLTCMIAHVCDLVPGDF+HV+GDAHVY+NH RPL EQLQ PKPF
Sbjct: 432 ADMGLGVPFNIASYALLTCMIAHVCDLVPGDFIHVIGDAHVYRNHVRPLQEQLQNQPKPF 491
Query: 1761 PMLKINPLKKDIDSFVISDFELMGYNPHQKIEMKMAV 1871
P+LKINP KKDIDSFV SDF+L+GY PHQKIEMKMAV
Sbjct: 492 PILKINPKKKDIDSFVASDFKLIGYVPHQKIEMKMAV 528
>ref|XP_002306118.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa]
gi|222849082|gb|EEE86629.1| dihydrofolate
reductase-thymidylate synthase [Populus trichocarpa]
Length = 528
Score = 848 bits (2191), Expect = 0.0
Identities = 406/528 (76%), Positives = 467/528 (88%), Gaps = 3/528 (0%)
Frame = +3
Query: 297 MSGGT--NVVNGDSHMGPRT-RRTYQVVVAATPSMGIGKDGKLPWRLPSDLNFFKEVTMT 467
MSG + N+ NG+++ R+TYQVVVAAT MGIGKDGKLPW+LPSDL FFK++T+T
Sbjct: 1 MSGDSVANLSNGNANTQQSDPRKTYQVVVAATKDMGIGKDGKLPWKLPSDLKFFKDLTLT 60
Query: 468 TSELGKTNAVIMGRKTWESIPQKYRPLPGRLNVVLTRSGSSDIASAENVVVCGGLASALD 647
T + GK NAVIMGRKTWESIP ++RPLPGRLNVVLTRSGS DIA+AENVV+CG + SAL+
Sbjct: 61 TMDSGKKNAVIMGRKTWESIPLEHRPLPGRLNVVLTRSGSFDIATAENVVICGSMGSALE 120
Query: 648 ILAGPPYCLSIEKVFVIGGGQIFSEALNAPECEAIHITEIETNIECDTFMPSIDSKHFRL 827
+LA PYCLSIEKVFVIGGGQI E+LNAP C+AIHITEIET+ +CDTF+P+ID+ F+
Sbjct: 121 LLAASPYCLSIEKVFVIGGGQILRESLNAPGCDAIHITEIETDFDCDTFIPAIDTSVFQP 180
Query: 828 WYSSFPLVQDNIRHSFATYIRVRSSAAESISLENGLTFDNSSESSKFEIENFSFLPKIVF 1007
WYSSFP V+++IRH F TY+RVRSS ES S NG D +SE+SKFE++ FSFLPK+VF
Sbjct: 181 WYSSFPKVENDIRHCFTTYVRVRSSTIESHSQNNGENSDGNSENSKFEVKKFSFLPKMVF 240
Query: 1008 ERHEEYTYLKLVQDIILNGTQKSDRTETGTLSKFGCQMRFNLRKYFPLLTTKRVFWRGVV 1187
ERHEEY YL++VQDII +G K DRT TGTLSKFGCQMRFNLRK FPLLTTK+VFWRGVV
Sbjct: 241 ERHEEYLYLRMVQDIISDGNLKDDRTGTGTLSKFGCQMRFNLRKNFPLLTTKKVFWRGVV 300
Query: 1188 EELLWFISGSTNSKVLQEKGIHIWDGNSSREYLDSIGLVDREEGDLGPVYGFQWRHFGAS 1367
EELLWFISGST++KVLQEKGIHIWDGN+SREYLDSIGL DREEGDLGPVYGFQWRHFGA
Sbjct: 301 EELLWFISGSTSAKVLQEKGIHIWDGNASREYLDSIGLKDREEGDLGPVYGFQWRHFGAR 360
Query: 1368 YTNMHANYNGQGFDQLLDVVNKIRNTPDDRRIVLSAWNPSDLKLMALPPCHMFAQFYVAN 1547
YT+MHA+Y GQGFDQLLDV++KI+N P+DRRI++SAWNPSDLKLMALPPCHMFAQFYVAN
Sbjct: 361 YTDMHADYTGQGFDQLLDVIDKIKNNPNDRRIIISAWNPSDLKLMALPPCHMFAQFYVAN 420
Query: 1548 GELSCQMYQRSADMGLGVPFNIASYSLLTCMIAHVCDLVPGDFVHVVGDAHVYKNHTRPL 1727
GELSCQMYQRSADMGLGVPFNIASY+LLTC+IAHVCDL+PGDFVHV+GDAHVY H RPL
Sbjct: 421 GELSCQMYQRSADMGLGVPFNIASYALLTCIIAHVCDLIPGDFVHVIGDAHVYHTHIRPL 480
Query: 1728 SEQLQKHPKPFPMLKINPLKKDIDSFVISDFELMGYNPHQKIEMKMAV 1871
EQL+K PKPFP+LKIN KKDID+FV +DF+L+GY+PHQKIEMKMAV
Sbjct: 481 QEQLRKLPKPFPILKINSEKKDIDTFVAADFKLIGYDPHQKIEMKMAV 528
>ref|NP_001238644.1| bifunctional dihydrofolate reductase-thymidylate synthase [Glycine
max] gi|1706522|sp|P51820.1|DRTS_SOYBN RecName:
Full=Bifunctional dihydrofolate reductase-thymidylate
synthase; Short=DHFR-TS; Includes: RecName:
Full=Dihydrofolate reductase; Includes: RecName:
Full=Thymidylate synthase gi|999190|gb|AAB34317.1|
dihydrofolate reductase-thymidylate synthase [Glycine
max] gi|1096144|prf||2111237A dihydrofolate
reductase-thymidylate synthase
Length = 530
Score = 848 bits (2191), Expect = 0.0
Identities = 403/527 (76%), Positives = 459/527 (87%)
Frame = +3
Query: 291 SVMSGGTNVVNGDSHMGPRTRRTYQVVVAATPSMGIGKDGKLPWRLPSDLNFFKEVTMTT 470
SV+S G + NG + P +RTYQVVVAAT GIGKDGKLPWRLP+DL FFKE+TM T
Sbjct: 6 SVISNGHS--NGSVNPLPNLQRTYQVVVAATQDWGIGKDGKLPWRLPTDLKFFKEITMKT 63
Query: 471 SELGKTNAVIMGRKTWESIPQKYRPLPGRLNVVLTRSGSSDIASAENVVVCGGLASALDI 650
SE GK NA++MGRKTWESIP +YRPL GRLNVVLTRSGS DIA+AENVV+CG ++SAL++
Sbjct: 64 SEPGKKNAIVMGRKTWESIPLEYRPLSGRLNVVLTRSGSFDIATAENVVICGSMSSALEL 123
Query: 651 LAGPPYCLSIEKVFVIGGGQIFSEALNAPECEAIHITEIETNIECDTFMPSIDSKHFRLW 830
LA PY LSIEKVFVIGGGQIF EALN P CEAIH+TEI+++IECDTFMP +D FR W
Sbjct: 124 LAASPYSLSIEKVFVIGGGQIFREALNVPGCEAIHLTEIQSSIECDTFMPPVDFTIFRPW 183
Query: 831 YSSFPLVQDNIRHSFATYIRVRSSAAESISLENGLTFDNSSESSKFEIENFSFLPKIVFE 1010
YSSFP V++NIR+SF TY+RVRSSAAES DN+SES KFE+++FSFLPK++ E
Sbjct: 184 YSSFPKVENNIRYSFTTYVRVRSSAAESAGQNIDPLLDNNSESMKFEVKDFSFLPKMISE 243
Query: 1011 RHEEYTYLKLVQDIILNGTQKSDRTETGTLSKFGCQMRFNLRKYFPLLTTKRVFWRGVVE 1190
RHEEY YLKLVQDII GT K DRT TGTLSKFGCQMRFNLR FPLLTTK+VFWRGVVE
Sbjct: 244 RHEEYLYLKLVQDIIAEGTTKGDRTGTGTLSKFGCQMRFNLRGNFPLLTTKKVFWRGVVE 303
Query: 1191 ELLWFISGSTNSKVLQEKGIHIWDGNSSREYLDSIGLVDREEGDLGPVYGFQWRHFGASY 1370
ELLWFISGSTN+KVLQEKGIHIWDGN+SREYLD +GL +REEGDLGPVYGFQWRHFGA Y
Sbjct: 304 ELLWFISGSTNAKVLQEKGIHIWDGNASREYLDGVGLTEREEGDLGPVYGFQWRHFGARY 363
Query: 1371 TNMHANYNGQGFDQLLDVVNKIRNTPDDRRIVLSAWNPSDLKLMALPPCHMFAQFYVANG 1550
T+MH +Y+GQGFDQLLDV+NKI+ PDDRRI+LSAWNP DLKLMALPPCHMFAQFYVA+G
Sbjct: 364 TDMHHDYSGQGFDQLLDVINKIKRNPDDRRIILSAWNPVDLKLMALPPCHMFAQFYVAHG 423
Query: 1551 ELSCQMYQRSADMGLGVPFNIASYSLLTCMIAHVCDLVPGDFVHVVGDAHVYKNHTRPLS 1730
ELSCQMYQRSADMGLG+PFNIASY+LLTCMIAHVCDL+PGDF+HV+GDAH+Y+NH RPL
Sbjct: 424 ELSCQMYQRSADMGLGIPFNIASYALLTCMIAHVCDLIPGDFIHVIGDAHIYRNHVRPLQ 483
Query: 1731 EQLQKHPKPFPMLKINPLKKDIDSFVISDFELMGYNPHQKIEMKMAV 1871
EQL PKPFP LKINP KKDIDSFV +DF+L+GY+PHQKI+MK++V
Sbjct: 484 EQLHNQPKPFPTLKINPKKKDIDSFVAADFKLIGYDPHQKIDMKLSV 530