BLASTX nr result

ID: Coptis21_contig00003593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003593
         (1873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163548.1| PREDICTED: DEAD-box ATP-dependent RNA helica...  1001   0.0  
ref|XP_002271334.2| PREDICTED: DEAD-box ATP-dependent RNA helica...  1000   0.0  
ref|XP_004135864.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   999   0.0  
ref|XP_002328711.1| predicted protein [Populus trichocarpa] gi|2...   983   0.0  
ref|XP_003521701.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   981   0.0  

>ref|XP_004163548.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Cucumis
            sativus]
          Length = 597

 Score = 1001 bits (2587), Expect = 0.0
 Identities = 494/541 (91%), Positives = 520/541 (96%)
 Frame = -2

Query: 1830 KPSLLFKATQLKRDLPEVTPTQQLVLQEKEMIEHLSDRKTLMSVRELAKGITYSEPLNTG 1651
            KPSLL KA+Q+KRD PEV+PT+Q+V QEKEMIEHLSDRKTLMSVRELAKGITY+EPL TG
Sbjct: 57   KPSLLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTG 116

Query: 1650 WKPPLNIRRMSRKVCDRIRKQWHILVDGEDVPPPIKNFRDMRLLDPVLDKLKEKGIVQPT 1471
            WKPPL IRRM +K CD IRKQWHI+VDG+++PPPIKNF+DMRL +PVL KLKEKGIVQPT
Sbjct: 117  WKPPLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPT 176

Query: 1470 PIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEVSMPIVPGEGPFGLVICP 1291
            PIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIM+ALQEEV MPIV GEGPFGL+ICP
Sbjct: 177  PIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICP 236

Query: 1290 SRELARQTYEVLEEFLTPMKQCGYPEIRPLLCIGGVDMRSQLEVVKKGVHIVVATPGRLK 1111
            SRELARQTYEV+E+FL PMK+ GYPE+RPLLCIGGVDMRSQ+EVVKKGVHIVVATPGRLK
Sbjct: 237  SRELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLK 296

Query: 1110 DMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPAKIQNF 931
            DMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMP KIQNF
Sbjct: 297  DMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNF 356

Query: 930  AKSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADV 751
            A+SALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADV
Sbjct: 357  ARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADV 416

Query: 750  DDIHEYLLLKGVEAVAIHGGKDQEERENAISSFKAGKKDVLVATDVASKGLDFPDIQHVI 571
            DDIHEYLLLKGVEAVAIHGGKDQEERE AISSFKA KKDVLVATDVASKGLDFPDIQHVI
Sbjct: 417  DDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVI 476

Query: 570  NYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQNETTLLDLKHLLQEAKQRIPPVLAE 391
            NYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQ+ETTLLDLKHLLQEAKQRIPPVLAE
Sbjct: 477  NYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAE 536

Query: 390  LSGPMDDADAITNASGVKGCAYCGGLGHRIADCPKLEHQKSQAIANTRRDYFGSGGYRGE 211
            LS PM+D +AITNASGVKGCAYCGGLGHRI DCPKLEHQKS AIA++RRDYFGSGGYRGE
Sbjct: 537  LSDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGE 596

Query: 210  I 208
            I
Sbjct: 597  I 597


>ref|XP_002271334.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 35 isoform 1 [Vitis
            vinifera] gi|147861063|emb|CAN78736.1| hypothetical
            protein VITISV_003102 [Vitis vinifera]
            gi|297743544|emb|CBI36411.3| unnamed protein product
            [Vitis vinifera]
          Length = 587

 Score = 1000 bits (2586), Expect = 0.0
 Identities = 492/541 (90%), Positives = 521/541 (96%)
 Frame = -2

Query: 1830 KPSLLFKATQLKRDLPEVTPTQQLVLQEKEMIEHLSDRKTLMSVRELAKGITYSEPLNTG 1651
            KPSLL KA+QLKRDLPE++P +Q+V QEKEMIEHLSDRKTLMSVRELAKGITY+EPL TG
Sbjct: 47   KPSLLVKASQLKRDLPEISPAEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTG 106

Query: 1650 WKPPLNIRRMSRKVCDRIRKQWHILVDGEDVPPPIKNFRDMRLLDPVLDKLKEKGIVQPT 1471
            WKPPL IRRMSRK C+ IRKQWHI+VDG+++PPPIKNF+DMR  +P+L  LK KGIVQPT
Sbjct: 107  WKPPLPIRRMSRKECESIRKQWHIIVDGDEIPPPIKNFKDMRFPEPILKNLKAKGIVQPT 166

Query: 1470 PIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEVSMPIVPGEGPFGLVICP 1291
            PIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEVSMPIVPGEGPFGLVICP
Sbjct: 167  PIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEVSMPIVPGEGPFGLVICP 226

Query: 1290 SRELARQTYEVLEEFLTPMKQCGYPEIRPLLCIGGVDMRSQLEVVKKGVHIVVATPGRLK 1111
            SRELARQTYEV+E+FL PM++CGYPE+RPLLCIGGVDMRSQLEVVKKGVHI+VATPGRLK
Sbjct: 227  SRELARQTYEVVEQFLVPMRECGYPELRPLLCIGGVDMRSQLEVVKKGVHIIVATPGRLK 286

Query: 1110 DMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPAKIQNF 931
            DMLAKKK+NLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMP KIQNF
Sbjct: 287  DMLAKKKLNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNF 346

Query: 930  AKSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADV 751
            A+SALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKT PPVLIFCENKADV
Sbjct: 347  ARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTSPPVLIFCENKADV 406

Query: 750  DDIHEYLLLKGVEAVAIHGGKDQEERENAISSFKAGKKDVLVATDVASKGLDFPDIQHVI 571
            DDIHEYLLLKGVEAVAIHGGKDQEERE AISSFKAGKKDVLVATDVASKGLDFPDI+HVI
Sbjct: 407  DDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIKHVI 466

Query: 570  NYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQNETTLLDLKHLLQEAKQRIPPVLAE 391
            NYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQ+ETTLLDLKHLLQEAKQRIPPVLAE
Sbjct: 467  NYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAE 526

Query: 390  LSGPMDDADAITNASGVKGCAYCGGLGHRIADCPKLEHQKSQAIANTRRDYFGSGGYRGE 211
            L+ PM+D DAIT+ASGVKGCAYCGGLGHRI DCPKLEHQKS AIA++RRDYFGSGGYRGE
Sbjct: 527  LNDPMEDVDAITDASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGE 586

Query: 210  I 208
            I
Sbjct: 587  I 587


>ref|XP_004135864.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Cucumis
            sativus]
          Length = 597

 Score =  999 bits (2584), Expect = 0.0
 Identities = 493/541 (91%), Positives = 520/541 (96%)
 Frame = -2

Query: 1830 KPSLLFKATQLKRDLPEVTPTQQLVLQEKEMIEHLSDRKTLMSVRELAKGITYSEPLNTG 1651
            KPSLL KA+Q+KRD PEV+PT+Q+V QEKEMIEHLSDRKTLMSVRELAKGITY+EPL TG
Sbjct: 57   KPSLLVKASQMKRDQPEVSPTEQIVQQEKEMIEHLSDRKTLMSVRELAKGITYTEPLLTG 116

Query: 1650 WKPPLNIRRMSRKVCDRIRKQWHILVDGEDVPPPIKNFRDMRLLDPVLDKLKEKGIVQPT 1471
            WKPPL IRRM +K CD IRKQWHI+VDG+++PPPIKNF+DMRL +PVL KLKEKGIVQPT
Sbjct: 117  WKPPLPIRRMPKKACDLIRKQWHIIVDGDEIPPPIKNFKDMRLPEPVLKKLKEKGIVQPT 176

Query: 1470 PIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEVSMPIVPGEGPFGLVICP 1291
            PIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIM+ALQEEV MPIV GEGPFGL+ICP
Sbjct: 177  PIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMIALQEEVMMPIVSGEGPFGLIICP 236

Query: 1290 SRELARQTYEVLEEFLTPMKQCGYPEIRPLLCIGGVDMRSQLEVVKKGVHIVVATPGRLK 1111
            SRELARQTYEV+E+FL PMK+ GYPE+RPLLCIGGVDMRSQ+EVVKKGVHIVVATPGRLK
Sbjct: 237  SRELARQTYEVVEQFLIPMKEAGYPELRPLLCIGGVDMRSQIEVVKKGVHIVVATPGRLK 296

Query: 1110 DMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPAKIQNF 931
            DMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMP KIQNF
Sbjct: 297  DMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNF 356

Query: 930  AKSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADV 751
            A+SALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADV
Sbjct: 357  ARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADV 416

Query: 750  DDIHEYLLLKGVEAVAIHGGKDQEERENAISSFKAGKKDVLVATDVASKGLDFPDIQHVI 571
            DDIHEYLLLKGVEAVAIHGGKDQEERE AISSFKA KKDVLVATDVASKGLDFPDIQHVI
Sbjct: 417  DDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKASKKDVLVATDVASKGLDFPDIQHVI 476

Query: 570  NYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQNETTLLDLKHLLQEAKQRIPPVLAE 391
            NYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQ+ETTLLDLKHLLQEAKQRIPPVLAE
Sbjct: 477  NYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAE 536

Query: 390  LSGPMDDADAITNASGVKGCAYCGGLGHRIADCPKLEHQKSQAIANTRRDYFGSGGYRGE 211
            L+ PM+D +AITNASGVKGCAYCGGLGHRI DCPKLEHQKS AIA++RRDYFGSGGYRGE
Sbjct: 537  LNDPMEDVEAITNASGVKGCAYCGGLGHRIRDCPKLEHQKSMAIASSRRDYFGSGGYRGE 596

Query: 210  I 208
            I
Sbjct: 597  I 597


>ref|XP_002328711.1| predicted protein [Populus trichocarpa] gi|222839009|gb|EEE77360.1|
            predicted protein [Populus trichocarpa]
          Length = 587

 Score =  983 bits (2542), Expect = 0.0
 Identities = 481/541 (88%), Positives = 515/541 (95%)
 Frame = -2

Query: 1830 KPSLLFKATQLKRDLPEVTPTQQLVLQEKEMIEHLSDRKTLMSVRELAKGITYSEPLNTG 1651
            KPSLL KA+QLKRD PE++ T+Q+V QEKEMIEHLSD+KTLMSVRELAKGITY+EPL TG
Sbjct: 47   KPSLLVKASQLKRDQPEISQTEQIVQQEKEMIEHLSDKKTLMSVRELAKGITYTEPLLTG 106

Query: 1650 WKPPLNIRRMSRKVCDRIRKQWHILVDGEDVPPPIKNFRDMRLLDPVLDKLKEKGIVQPT 1471
            WKPPL IR+MSRK CD IRKQWHI+VDGE +PPPIK+F+DMR  +P+L  LK KGIVQPT
Sbjct: 107  WKPPLPIRKMSRKECDAIRKQWHIIVDGEKIPPPIKHFKDMRFPEPILKMLKAKGIVQPT 166

Query: 1470 PIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEVSMPIVPGEGPFGLVICP 1291
            PIQVQGLPVIL+GRDMIGIAFTGSGKTLVFVLPLIM+ALQEE+ MPI+PGEGP GL++CP
Sbjct: 167  PIQVQGLPVILTGRDMIGIAFTGSGKTLVFVLPLIMIALQEEIMMPIMPGEGPVGLIVCP 226

Query: 1290 SRELARQTYEVLEEFLTPMKQCGYPEIRPLLCIGGVDMRSQLEVVKKGVHIVVATPGRLK 1111
            SRELARQTYEV+EEFL PM+  GYPE+RPLLCIGGVDMRSQLEVVKKGVHIVVATPGRLK
Sbjct: 227  SRELARQTYEVVEEFLIPMRAAGYPELRPLLCIGGVDMRSQLEVVKKGVHIVVATPGRLK 286

Query: 1110 DMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPAKIQNF 931
            DMLAKKKM+LDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMP KIQNF
Sbjct: 287  DMLAKKKMSLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNF 346

Query: 930  AKSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADV 751
            A+SALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVL+FCENKADV
Sbjct: 347  ARSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLVFCENKADV 406

Query: 750  DDIHEYLLLKGVEAVAIHGGKDQEERENAISSFKAGKKDVLVATDVASKGLDFPDIQHVI 571
            DDIHEYLLLKGVEAVA+HGGKDQEERE AISSFKAGKKDVLVATDVASKGLDFPDIQHVI
Sbjct: 407  DDIHEYLLLKGVEAVAVHGGKDQEEREYAISSFKAGKKDVLVATDVASKGLDFPDIQHVI 466

Query: 570  NYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQNETTLLDLKHLLQEAKQRIPPVLAE 391
            NYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQ+ETTLLDLKHLLQEAKQRIPPVLAE
Sbjct: 467  NYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAE 526

Query: 390  LSGPMDDADAITNASGVKGCAYCGGLGHRIADCPKLEHQKSQAIANTRRDYFGSGGYRGE 211
            L+ PM+D D IT+ASGVKGCAYCGGLGHRI DCPKLEHQ+SQ +AN+RRDYFGSGGYRGE
Sbjct: 527  LNDPMEDGDTITSASGVKGCAYCGGLGHRIRDCPKLEHQRSQQLANSRRDYFGSGGYRGE 586

Query: 210  I 208
            I
Sbjct: 587  I 587


>ref|XP_003521701.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Glycine max]
          Length = 587

 Score =  981 bits (2535), Expect = 0.0
 Identities = 479/541 (88%), Positives = 516/541 (95%)
 Frame = -2

Query: 1830 KPSLLFKATQLKRDLPEVTPTQQLVLQEKEMIEHLSDRKTLMSVRELAKGITYSEPLNTG 1651
            KPSLL KA+QLKR+ PE++ T+Q+V QEKEMIE+LSDRKTLMSVRELAKGITY+EPL TG
Sbjct: 47   KPSLLVKASQLKREQPEISVTEQIVQQEKEMIENLSDRKTLMSVRELAKGITYTEPLPTG 106

Query: 1650 WKPPLNIRRMSRKVCDRIRKQWHILVDGEDVPPPIKNFRDMRLLDPVLDKLKEKGIVQPT 1471
            WKPPL++RRMS+K CD IRKQWHI+VDG D+PPPIKNF+DMR  +PVL KLK KGIVQPT
Sbjct: 107  WKPPLHVRRMSKKECDLIRKQWHIIVDGGDIPPPIKNFKDMRFPEPVLKKLKAKGIVQPT 166

Query: 1470 PIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEVSMPIVPGEGPFGLVICP 1291
            PIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLP+IM+A+QEE+ MPIVPGEGPFGL+ICP
Sbjct: 167  PIQVQGLPVILSGRDMIGIAFTGSGKTLVFVLPMIMMAMQEEIMMPIVPGEGPFGLIICP 226

Query: 1290 SRELARQTYEVLEEFLTPMKQCGYPEIRPLLCIGGVDMRSQLEVVKKGVHIVVATPGRLK 1111
            SRELARQTYEV+E+FL P+K+ GYPE+RPLLCIGGVDMRSQL++VKKGVHIVVATPGRLK
Sbjct: 227  SRELARQTYEVIEQFLIPLKEAGYPELRPLLCIGGVDMRSQLDIVKKGVHIVVATPGRLK 286

Query: 1110 DMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPAKIQNF 931
            DMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMP KIQNF
Sbjct: 287  DMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPTKIQNF 346

Query: 930  AKSALVKPVTVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADV 751
            A+SALVKP+ VNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADV
Sbjct: 347  ARSALVKPIIVNVGRAGAANLDVIQEVEYVKQEAKIVYLLECLQKTPPPVLIFCENKADV 406

Query: 750  DDIHEYLLLKGVEAVAIHGGKDQEERENAISSFKAGKKDVLVATDVASKGLDFPDIQHVI 571
            DDIHEYLLLKGVEAVAIHGGKDQEERE AI++FKAGKKDVLVATDVASKGLDFPDIQHVI
Sbjct: 407  DDIHEYLLLKGVEAVAIHGGKDQEEREYAIAAFKAGKKDVLVATDVASKGLDFPDIQHVI 466

Query: 570  NYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQNETTLLDLKHLLQEAKQRIPPVLAE 391
            NYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQ+ETTLLDLKHLLQEAKQRIPPVLAE
Sbjct: 467  NYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLAE 526

Query: 390  LSGPMDDADAITNASGVKGCAYCGGLGHRIADCPKLEHQKSQAIANTRRDYFGSGGYRGE 211
            L+ PM+D + IT+ SGVKGCAYCGGLGHRI DCPKLEHQKS AIAN R+DYFGSGGYRGE
Sbjct: 527  LNDPMEDNEEITDISGVKGCAYCGGLGHRIRDCPKLEHQKSMAIANNRKDYFGSGGYRGE 586

Query: 210  I 208
            I
Sbjct: 587  I 587


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