BLASTX nr result

ID: Coptis21_contig00003581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003581
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001050537.1| Os03g0576700 [Oryza sativa Japonica Group] g...    63   2e-08
ref|XP_002519996.1| 60S ribosomal protein L13, putative [Ricinus...    63   2e-08
ref|XP_002529265.1| 60S ribosomal protein L13, putative [Ricinus...    63   2e-08
gb|ABR26116.1| 60S ribosomal protein l13-2 [Oryza sativa Indica ...    63   2e-08
gb|ABF97255.1| 60S ribosomal protein L13-2, putative, expressed ...    63   2e-08

>ref|NP_001050537.1| Os03g0576700 [Oryza sativa Japonica Group]
           gi|18873677|emb|CAC81268.1| putative cold-induced
           protein [Oryza sativa Indica Group]
           gi|32493112|gb|AAP85547.1| ribosomal protein large
           subunit 13 [Oryza sativa Japonica Group]
           gi|38093740|gb|AAR10856.1| putative 60S ribosomal
           protein [Oryza sativa Japonica Group]
           gi|108709459|gb|ABF97254.1| 60S ribosomal protein L13-2,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113549008|dbj|BAF12451.1| Os03g0576700 [Oryza sativa
           Japonica Group] gi|125544606|gb|EAY90745.1| hypothetical
           protein OsI_12345 [Oryza sativa Indica Group]
           gi|125586909|gb|EAZ27573.1| hypothetical protein
           OsJ_11521 [Oryza sativa Japonica Group]
           gi|215687345|dbj|BAG91910.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215737421|dbj|BAG96551.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740859|dbj|BAG97015.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 208

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/41 (73%), Positives = 35/41 (85%)
 Frame = +1

Query: 1   ELVKPTEEMKAFKAYAKLRTERMNKKHFGARMKRAMEAKAE 123
           E+VK T+EMKAFKAYAKLR ERMN++H GAR KRA EA+ E
Sbjct: 165 EVVKVTDEMKAFKAYAKLRVERMNQRHVGARQKRAAEAEKE 205


>ref|XP_002519996.1| 60S ribosomal protein L13, putative [Ricinus communis]
           gi|223540760|gb|EEF42320.1| 60S ribosomal protein L13,
           putative [Ricinus communis]
          Length = 207

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/41 (73%), Positives = 35/41 (85%)
 Frame = +1

Query: 1   ELVKPTEEMKAFKAYAKLRTERMNKKHFGARMKRAMEAKAE 123
           ELVK TEEMK+FKAY KLR ERMN++H GARMK+A EA+ E
Sbjct: 164 ELVKVTEEMKSFKAYDKLRVERMNQRHLGARMKKAAEAEKE 204


>ref|XP_002529265.1| 60S ribosomal protein L13, putative [Ricinus communis]
           gi|223531254|gb|EEF33097.1| 60S ribosomal protein L13,
           putative [Ricinus communis]
          Length = 207

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/41 (73%), Positives = 35/41 (85%)
 Frame = +1

Query: 1   ELVKPTEEMKAFKAYAKLRTERMNKKHFGARMKRAMEAKAE 123
           ELVK TEEMK+FKAY KLR ERMN++H GARMK+A EA+ E
Sbjct: 164 ELVKVTEEMKSFKAYDKLRVERMNQRHLGARMKKAAEAEKE 204


>gb|ABR26116.1| 60S ribosomal protein l13-2 [Oryza sativa Indica Group]
          Length = 70

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/41 (73%), Positives = 35/41 (85%)
 Frame = +1

Query: 1   ELVKPTEEMKAFKAYAKLRTERMNKKHFGARMKRAMEAKAE 123
           E+VK T+EMKAFKAYAKLR ERMN++H GAR KRA EA+ E
Sbjct: 27  EVVKVTDEMKAFKAYAKLRVERMNQRHVGARQKRAAEAEKE 67


>gb|ABF97255.1| 60S ribosomal protein L13-2, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 196

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/41 (73%), Positives = 35/41 (85%)
 Frame = +1

Query: 1   ELVKPTEEMKAFKAYAKLRTERMNKKHFGARMKRAMEAKAE 123
           E+VK T+EMKAFKAYAKLR ERMN++H GAR KRA EA+ E
Sbjct: 153 EVVKVTDEMKAFKAYAKLRVERMNQRHVGARQKRAAEAEKE 193


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