BLASTX nr result

ID: Coptis21_contig00003580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003580
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529247.1| PREDICTED: armadillo repeat-containing prote...   176   5e-42
ref|XP_002281840.1| PREDICTED: armadillo repeat-containing prote...   174   1e-41
gb|ACJ85697.1| unknown [Medicago truncatula] gi|388518985|gb|AFK...   172   5e-41
ref|XP_004165806.1| PREDICTED: armadillo repeat-containing prote...   167   2e-39
ref|XP_004136992.1| PREDICTED: armadillo repeat-containing prote...   167   2e-39

>ref|XP_003529247.1| PREDICTED: armadillo repeat-containing protein 6 [Glycine max]
          Length = 463

 Score =  176 bits (445), Expect = 5e-42
 Identities = 87/109 (79%), Positives = 97/109 (88%)
 Frame = +1

Query: 4   SEDPSVLQEIMSIICTLSLRSPGNAASAVEAGAGDFAIQAMQKFPAAPQMQKQSCLMIRN 183
           ++DPSVLQEIMSII  LSLRSP NAA A+EAGAGD AIQAM+KFPAA QMQ+ SCLMIRN
Sbjct: 355 ADDPSVLQEIMSIISVLSLRSPDNAARAIEAGAGDLAIQAMEKFPAAHQMQRNSCLMIRN 414

Query: 184 LVVRNPENRSILLGNGIEKIIRKVKENHESCKEAATDALRDLGLDNYNV 330
           LVVRNPENR+ILL NGIEK IRK K+ H +CK+AATDALRDLGLDNYN+
Sbjct: 415 LVVRNPENRTILLNNGIEKYIRKAKQTHTNCKDAATDALRDLGLDNYNL 463


>ref|XP_002281840.1| PREDICTED: armadillo repeat-containing protein 6 [Vitis vinifera]
           gi|297741329|emb|CBI32460.3| unnamed protein product
           [Vitis vinifera]
          Length = 460

 Score =  174 bits (442), Expect = 1e-41
 Identities = 89/108 (82%), Positives = 95/108 (87%)
 Frame = +1

Query: 4   SEDPSVLQEIMSIICTLSLRSPGNAASAVEAGAGDFAIQAMQKFPAAPQMQKQSCLMIRN 183
           S+DPSVLQE+M I C LSLRSP NAA AVEAGAGD AIQAMQKFPAA QMQ+ SCLMIRN
Sbjct: 353 SDDPSVLQEVMPIFCVLSLRSPDNAARAVEAGAGDLAIQAMQKFPAAQQMQRNSCLMIRN 412

Query: 184 LVVRNPENRSILLGNGIEKIIRKVKENHESCKEAATDALRDLGLDNYN 327
           LVVRN ENR++LL NGIEKIIRK KENHESCK+AA DALRDLGLD YN
Sbjct: 413 LVVRNQENRTLLLSNGIEKIIRKAKENHESCKDAANDALRDLGLD-YN 459


>gb|ACJ85697.1| unknown [Medicago truncatula] gi|388518985|gb|AFK47554.1| unknown
           [Medicago truncatula]
          Length = 459

 Score =  172 bits (436), Expect = 5e-41
 Identities = 86/109 (78%), Positives = 96/109 (88%)
 Frame = +1

Query: 4   SEDPSVLQEIMSIICTLSLRSPGNAASAVEAGAGDFAIQAMQKFPAAPQMQKQSCLMIRN 183
           ++DP+VLQEIMSII  LSLRSP NAA A+EAGAGD AIQAMQKFPAA QMQ+ SCLMIRN
Sbjct: 351 ADDPTVLQEIMSIISVLSLRSPENAARAIEAGAGDLAIQAMQKFPAAHQMQRNSCLMIRN 410

Query: 184 LVVRNPENRSILLGNGIEKIIRKVKENHESCKEAATDALRDLGLDNYNV 330
           LV RNPENR+ILL NGIEK IRK K+ H +CKEAATDALRDLGLD+YN+
Sbjct: 411 LVARNPENRTILLNNGIEKHIRKAKQTHANCKEAATDALRDLGLDSYNL 459


>ref|XP_004165806.1| PREDICTED: armadillo repeat-containing protein 6-like [Cucumis
           sativus]
          Length = 465

 Score =  167 bits (423), Expect = 2e-39
 Identities = 80/107 (74%), Positives = 94/107 (87%)
 Frame = +1

Query: 4   SEDPSVLQEIMSIICTLSLRSPGNAASAVEAGAGDFAIQAMQKFPAAPQMQKQSCLMIRN 183
           S+DPSVLQE+M+++  L+LRSP NA  A+EAGAGD AIQAMQKFP+A QMQ+ SC MIRN
Sbjct: 358 SDDPSVLQEVMAVVSVLTLRSPENATQAIEAGAGDLAIQAMQKFPSAQQMQRNSCNMIRN 417

Query: 184 LVVRNPENRSILLGNGIEKIIRKVKENHESCKEAATDALRDLGLDNY 324
           LVVRNPENR++LL  GIEK IRK K+NHESCK+AA+DALRDLGLDNY
Sbjct: 418 LVVRNPENRALLLKTGIEKYIRKAKQNHESCKDAASDALRDLGLDNY 464


>ref|XP_004136992.1| PREDICTED: armadillo repeat-containing protein 6-like [Cucumis
           sativus]
          Length = 465

 Score =  167 bits (423), Expect = 2e-39
 Identities = 80/107 (74%), Positives = 94/107 (87%)
 Frame = +1

Query: 4   SEDPSVLQEIMSIICTLSLRSPGNAASAVEAGAGDFAIQAMQKFPAAPQMQKQSCLMIRN 183
           S+DPSVLQE+M+++  L+LRSP NA  A+EAGAGD AIQAMQKFP+A QMQ+ SC MIRN
Sbjct: 358 SDDPSVLQEVMAVVSVLTLRSPENATQAIEAGAGDLAIQAMQKFPSAQQMQRNSCNMIRN 417

Query: 184 LVVRNPENRSILLGNGIEKIIRKVKENHESCKEAATDALRDLGLDNY 324
           LVVRNPENR++LL  GIEK IRK K+NHESCK+AA+DALRDLGLDNY
Sbjct: 418 LVVRNPENRALLLKTGIEKYIRKAKQNHESCKDAASDALRDLGLDNY 464


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