BLASTX nr result

ID: Coptis21_contig00003578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003578
         (1234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280416.1| PREDICTED: laccase-4 [Vitis vinifera] gi|297...   677   0.0  
ref|XP_002299828.1| predicted protein [Populus trichocarpa] gi|2...   676   0.0  
ref|XP_002322961.1| laccase 1a [Populus trichocarpa] gi|22286759...   669   0.0  
ref|XP_002308209.1| laccase 1d [Populus trichocarpa] gi|22285418...   668   0.0  
ref|XP_002278638.1| PREDICTED: laccase-4 [Vitis vinifera] gi|297...   668   0.0  

>ref|XP_002280416.1| PREDICTED: laccase-4 [Vitis vinifera] gi|297745946|emb|CBI16002.3|
            unnamed protein product [Vitis vinifera]
          Length = 554

 Score =  677 bits (1747), Expect = 0.0
 Identities = 325/411 (79%), Positives = 358/411 (87%)
 Frame = +1

Query: 1    PIVTVNGKFPGPTLYAREDDTVTVKVVNQVKYNMTIHWHGIRQLRTGWADGPAYITQCPI 180
            PIVTVNG FPGPT++AREDDTV +KVVN VKYN++IHWHGIRQLRTGWADGPAYITQCPI
Sbjct: 43   PIVTVNGNFPGPTIHAREDDTVLIKVVNHVKYNVSIHWHGIRQLRTGWADGPAYITQCPI 102

Query: 181  QPGQSYIYNFTITGQRGTLLWHAHILWLRATVHGGIVILPKRGVPYPFPKPHDEVVVILG 360
            QPGQSYIYNFTITGQRGTLLWHAHILWLRATVHG +VILPK GVPYPFP P+ E VVILG
Sbjct: 103  QPGQSYIYNFTITGQRGTLLWHAHILWLRATVHGALVILPKLGVPYPFPTPYKEAVVILG 162

Query: 361  EWWKSDTETVINQAMKLGSAPNVSDAHTINGQPGPLSSCSLKGSSQPGGFSLQVETGKTY 540
            EWWKSD E VIN+AMK G APNVSDAHTING PGP SSCSL+     GGF+L V+ GKTY
Sbjct: 163  EWWKSDVEAVINEAMKSGLAPNVSDAHTINGHPGPFSSCSLQ-----GGFTLPVDPGKTY 217

Query: 541  MLRIINAALNEELFFKIAGHKLTVVEVDAIYTKPFKTDTILIAPGQTTNVLLTANSGPGK 720
            MLRIINAALNEELF KIAGH LTVVEVDA YTKPF TDT+LIAPGQTTNVLLTA  G GK
Sbjct: 218  MLRIINAALNEELFLKIAGHHLTVVEVDATYTKPFSTDTVLIAPGQTTNVLLTAGLGAGK 277

Query: 721  YLVTVSPFMDSPIAVDNVTATATVQYSGTLATSSPITLTNPTPQNATPVATNFMNSLRSL 900
            YLVT S FMDSPIAVDN+TATATVQYSGTL +S+P T+TNP PQNAT VAT F +SLRSL
Sbjct: 278  YLVTASSFMDSPIAVDNMTATATVQYSGTL-SSTPTTITNPPPQNATSVATKFTDSLRSL 336

Query: 901  NSKKYPAKVPLNVDHSLFFAIGLGINPCSTCSNGTRVVASVNNVSFIMPKTSLLQAHFFN 1080
            NSKKYPA+VPL  DHSL F +GLGINPC+TC NG +VVA++NNV+F+MP T+LLQAH+F 
Sbjct: 337  NSKKYPARVPLATDHSLLFTVGLGINPCATCVNGGKVVANINNVTFVMPTTALLQAHYFK 396

Query: 1081 ISGVFTEDFPGKPPIPFNYTGTSPKSMATTNGTRLYRLQYNSTVQVILQDT 1233
            + GV+T+DFPG PPI FNYTGT P +  T NGTRLYRL YNSTVQ++LQDT
Sbjct: 397  MKGVYTDDFPGNPPIAFNYTGTQPTNFQTMNGTRLYRLAYNSTVQLVLQDT 447


>ref|XP_002299828.1| predicted protein [Populus trichocarpa] gi|222847086|gb|EEE84633.1|
            predicted protein [Populus trichocarpa]
          Length = 554

 Score =  676 bits (1743), Expect = 0.0
 Identities = 322/411 (78%), Positives = 356/411 (86%)
 Frame = +1

Query: 1    PIVTVNGKFPGPTLYAREDDTVTVKVVNQVKYNMTIHWHGIRQLRTGWADGPAYITQCPI 180
            PIVTVNG+FPGPTL AREDDTV VKVVN VKYN++IHWHGIRQLRTGWADGPAYITQCP+
Sbjct: 43   PIVTVNGRFPGPTLVAREDDTVLVKVVNHVKYNVSIHWHGIRQLRTGWADGPAYITQCPL 102

Query: 181  QPGQSYIYNFTITGQRGTLLWHAHILWLRATVHGGIVILPKRGVPYPFPKPHDEVVVILG 360
            QPGQS++YNFTI+GQRGTLLWHAHILWLRATVHG IVILPKRGVPYPFP PH E V++LG
Sbjct: 103  QPGQSFVYNFTISGQRGTLLWHAHILWLRATVHGAIVILPKRGVPYPFPTPHREEVIVLG 162

Query: 361  EWWKSDTETVINQAMKLGSAPNVSDAHTINGQPGPLSSCSLKGSSQPGGFSLQVETGKTY 540
            EWWKSD E VIN+AM  G APNVSDAHTING PGP+S C     S  GG++L V  GKTY
Sbjct: 163  EWWKSDVEAVINEAMNSGRAPNVSDAHTINGHPGPVSGC-----SSQGGYNLPVRPGKTY 217

Query: 541  MLRIINAALNEELFFKIAGHKLTVVEVDAIYTKPFKTDTILIAPGQTTNVLLTANSGPGK 720
            MLRIINAALNEELFFKIAGH+LTVVEVDA Y KPFK DTI+IAPGQTTNVL+TAN G GK
Sbjct: 218  MLRIINAALNEELFFKIAGHQLTVVEVDATYVKPFKIDTIVIAPGQTTNVLVTANRGSGK 277

Query: 721  YLVTVSPFMDSPIAVDNVTATATVQYSGTLATSSPITLTNPTPQNATPVATNFMNSLRSL 900
            YLV  SPFMD+PIAVDNVTATAT+ YSGTLA S+  TLT P  QNATPVATNF ++LRSL
Sbjct: 278  YLVAASPFMDAPIAVDNVTATATLHYSGTLA-STTTTLTVPPAQNATPVATNFTDALRSL 336

Query: 901  NSKKYPAKVPLNVDHSLFFAIGLGINPCSTCSNGTRVVASVNNVSFIMPKTSLLQAHFFN 1080
            NS KYPA+VPL +DHSLFF IGLG+NPC+TC NG RVVA +NNV+F+MP  +LLQAHFFN
Sbjct: 337  NSIKYPARVPLKIDHSLFFTIGLGVNPCATCVNGNRVVADINNVTFVMPTIALLQAHFFN 396

Query: 1081 ISGVFTEDFPGKPPIPFNYTGTSPKSMATTNGTRLYRLQYNSTVQVILQDT 1233
            I GVFT+DFPG PP PFNYTGT PK+  T NGT+LYRL YNSTVQ++LQDT
Sbjct: 397  IKGVFTDDFPGNPPTPFNYTGTQPKNFQTVNGTKLYRLAYNSTVQLVLQDT 447


>ref|XP_002322961.1| laccase 1a [Populus trichocarpa] gi|222867591|gb|EEF04722.1| laccase
            1a [Populus trichocarpa]
          Length = 557

 Score =  669 bits (1726), Expect = 0.0
 Identities = 321/413 (77%), Positives = 358/413 (86%), Gaps = 2/413 (0%)
 Frame = +1

Query: 1    PIVTVNGKFPGPTLYAREDDTVTVKVVNQVKYNMTIHWHGIRQLRTGWADGPAYITQCPI 180
            PIVTVNG FPGPTLYAREDDTV VKVVN+VKYN++IHWHGIRQLRTGWADGPAYITQCPI
Sbjct: 44   PIVTVNGLFPGPTLYAREDDTVLVKVVNRVKYNLSIHWHGIRQLRTGWADGPAYITQCPI 103

Query: 181  QPGQSYIYNFTITGQRGTLLWHAHILWLRATVHGGIVILPKRGVPYPFPKPHDEVVVILG 360
            QPGQSY+YNFTITGQRGTLLWHAHILWLRATVHG IV+LPK GVPYPFP PH EVVV+L 
Sbjct: 104  QPGQSYVYNFTITGQRGTLLWHAHILWLRATVHGAIVVLPKLGVPYPFPAPHKEVVVVLA 163

Query: 361  EWWKSDTETVINQAMKLGSAPNVSDAHTINGQPGPLSSCSLKGSSQPGGFSLQVETGKTY 540
            EWWKSDTE VIN+A+K G APNVSDAHTING PG +S+C     S  GGF+L V++GKTY
Sbjct: 164  EWWKSDTEAVINEALKSGLAPNVSDAHTINGHPGAVSTC-----SSQGGFTLPVQSGKTY 218

Query: 541  MLRIINAALNEELFFKIAGHKLTVVEVDAIYTKPFKTDTILIAPGQTTNVLLTANSGPGK 720
            MLR+INAALNEELFFKIAGHKLTVVEVDA Y KPFKTDT+LIAPGQTTNVL+T N   GK
Sbjct: 219  MLRLINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDTVLIAPGQTTNVLVTTNKNTGK 278

Query: 721  YLVTVSPFMDSPIAVDNVTATATVQYSGTLATSSPITLTNPTPQNATPVATNFMNSLRSL 900
            YLV  SPFMD+PIAVDN+TATAT+ YSG L ++SP TLT P P+NAT +A  F NSLRSL
Sbjct: 279  YLVAASPFMDAPIAVDNMTATATLHYSGAL-SNSPTTLTIPPPKNATAIANQFTNSLRSL 337

Query: 901  NSKKYPAKVPLNVDHSLFFAIGLGINPCSTC--SNGTRVVASVNNVSFIMPKTSLLQAHF 1074
            NSK +PAKVPL VDHSLFF +GLGINPC TC   NG+RVVAS+NNV+F+MP T+LLQAHF
Sbjct: 338  NSKTFPAKVPLTVDHSLFFTVGLGINPCPTCKAGNGSRVVASINNVTFVMPTTALLQAHF 397

Query: 1075 FNISGVFTEDFPGKPPIPFNYTGTSPKSMATTNGTRLYRLQYNSTVQVILQDT 1233
            FNISGVFT DFP KPP  FNYTGT P ++ TT+GT+ YRL YNSTVQ+++QDT
Sbjct: 398  FNISGVFTTDFPAKPPHVFNYTGTPPTNLQTTSGTKAYRLPYNSTVQLVMQDT 450


>ref|XP_002308209.1| laccase 1d [Populus trichocarpa] gi|222854185|gb|EEE91732.1| laccase
            1d [Populus trichocarpa]
          Length = 550

 Score =  668 bits (1724), Expect = 0.0
 Identities = 317/413 (76%), Positives = 360/413 (87%), Gaps = 2/413 (0%)
 Frame = +1

Query: 1    PIVTVNGKFPGPTLYAREDDTVTVKVVNQVKYNMTIHWHGIRQLRTGWADGPAYITQCPI 180
            PIVTVNG+FPGPTLYARE DTV VKVVN VKYN++IHWHGIRQLRTGWADGPAYITQCPI
Sbjct: 37   PIVTVNGRFPGPTLYAREHDTVLVKVVNHVKYNVSIHWHGIRQLRTGWADGPAYITQCPI 96

Query: 181  QPGQSYIYNFTITGQRGTLLWHAHILWLRATVHGGIVILPKRGVPYPFPKPHDEVVVILG 360
            QPGQSY+YNFTITGQRGTLLWHAHILWLRATVHG +V+LPKRG+PYPFP PH EVVV+L 
Sbjct: 97   QPGQSYVYNFTITGQRGTLLWHAHILWLRATVHGALVVLPKRGIPYPFPAPHKEVVVVLA 156

Query: 361  EWWKSDTETVINQAMKLGSAPNVSDAHTINGQPGPLSSCSLKGSSQPGGFSLQVETGKTY 540
            EWWKSDTE VIN+A+K G APNVSDAHTING PG +S+C     S  GGF+L V++G+TY
Sbjct: 157  EWWKSDTEAVINEALKSGLAPNVSDAHTINGHPGAVSAC-----SSQGGFTLPVKSGETY 211

Query: 541  MLRIINAALNEELFFKIAGHKLTVVEVDAIYTKPFKTDTILIAPGQTTNVLLTANSGPGK 720
            MLR+INAALNEELFFKIAGHKLTVVEVDA Y KPFKTDT+LIAPGQTTNVL+T N   GK
Sbjct: 212  MLRLINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDTVLIAPGQTTNVLVTTNKNTGK 271

Query: 721  YLVTVSPFMDSPIAVDNVTATATVQYSGTLATSSPITLTNPTPQNATPVATNFMNSLRSL 900
            YLV  SPFMDSPIAVDN+TATAT+QYSG LA +SP TLT P P+NAT VA  F NSLRSL
Sbjct: 272  YLVAASPFMDSPIAVDNMTATATLQYSGALA-NSPTTLTTPPPKNATAVANQFTNSLRSL 330

Query: 901  NSKKYPAKVPLNVDHSLFFAIGLGINPCSTC--SNGTRVVASVNNVSFIMPKTSLLQAHF 1074
            NS+++PAKVPLNVDH+LFF +GLG+NPC +C   NG+RVVAS+NNV+F+MP T+LLQAHF
Sbjct: 331  NSRRFPAKVPLNVDHNLFFTVGLGVNPCPSCKAGNGSRVVASINNVTFVMPTTALLQAHF 390

Query: 1075 FNISGVFTEDFPGKPPIPFNYTGTSPKSMATTNGTRLYRLQYNSTVQVILQDT 1233
             NISGVFT DFP KPP  FNYTGT P ++ T +GT++YRL YNSTVQ+++QDT
Sbjct: 391  LNISGVFTTDFPAKPPHVFNYTGTPPTNLQTKSGTKVYRLSYNSTVQLVMQDT 443


>ref|XP_002278638.1| PREDICTED: laccase-4 [Vitis vinifera] gi|297740241|emb|CBI30423.3|
            unnamed protein product [Vitis vinifera]
          Length = 556

 Score =  668 bits (1724), Expect = 0.0
 Identities = 319/413 (77%), Positives = 361/413 (87%), Gaps = 2/413 (0%)
 Frame = +1

Query: 1    PIVTVNGKFPGPTLYAREDDTVTVKVVNQVKYNMTIHWHGIRQLRTGWADGPAYITQCPI 180
            PIVTVNG+FPGPTLY REDDTV V+VVN VKYN++IHWHGIRQLRTGW+DGPAYITQCPI
Sbjct: 44   PIVTVNGRFPGPTLYVREDDTVLVRVVNHVKYNVSIHWHGIRQLRTGWSDGPAYITQCPI 103

Query: 181  QPGQSYIYNFTITGQRGTLLWHAHILWLRATVHGGIVILPKRGVPYPFPKPHDEVVVILG 360
            Q GQSY+YNFT+TGQRGTLLWHAH+LWLRATVHG IVILPKRGVPYPFPKPH EVVVILG
Sbjct: 104  QTGQSYLYNFTVTGQRGTLLWHAHVLWLRATVHGAIVILPKRGVPYPFPKPHKEVVVILG 163

Query: 361  EWWKSDTETVINQAMKLGSAPNVSDAHTINGQPGPLSSCSLKGSSQPGGFSLQVETGKTY 540
            EWWKSD E VINQA+  G APNVSDAHTING PGP+S+C        GGFSLQVE GKTY
Sbjct: 164  EWWKSDVEAVINQALSSGLAPNVSDAHTINGHPGPVSNC-----PSQGGFSLQVEAGKTY 218

Query: 541  MLRIINAALNEELFFKIAGHKLTVVEVDAIYTKPFKTDTILIAPGQTTNVLLTANSGPGK 720
            +LRIINAALNEELFFKIAGH+L+VVEVDA+YTKPFK DT++IAPGQTTN L+TA+   GK
Sbjct: 219  LLRIINAALNEELFFKIAGHQLSVVEVDAVYTKPFKIDTLVIAPGQTTNALITADQSSGK 278

Query: 721  YLVTVSPFMDSPIAVDNVTATATVQYSGTLATSSPITLTNPTPQNATPVATNFMNSLRSL 900
            YL+  SPFMDSPIAVDN+TATAT+ YSGTLA SSP +LT+P P NAT VA  F+NSLRSL
Sbjct: 279  YLMAASPFMDSPIAVDNLTATATLHYSGTLA-SSPTSLTSPPPPNATAVANKFVNSLRSL 337

Query: 901  NSKKYPAKVPLNVDHSLFFAIGLGINPCSTC--SNGTRVVASVNNVSFIMPKTSLLQAHF 1074
            NSKKYPAKVPL VDHSLF  +GLGINPC+TC   NG+R VAS+NNV+F+MP T++LQAH+
Sbjct: 338  NSKKYPAKVPLTVDHSLFITVGLGINPCATCVAGNGSRAVASMNNVTFVMPTTAILQAHY 397

Query: 1075 FNISGVFTEDFPGKPPIPFNYTGTSPKSMATTNGTRLYRLQYNSTVQVILQDT 1233
            FNISGV+T DFP  PP+ FNYTG SP ++ TTNGT++YR+ YNSTVQV+LQDT
Sbjct: 398  FNISGVYTTDFPANPPVAFNYTG-SPANLQTTNGTKVYRVPYNSTVQVVLQDT 449


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