BLASTX nr result

ID: Coptis21_contig00003569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003569
         (1655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632477.1| PREDICTED: uncharacterized protein LOC100854...   298   4e-78
emb|CAN61677.1| hypothetical protein VITISV_018326 [Vitis vinifera]   273   8e-71
ref|XP_003634417.1| PREDICTED: RING-H2 finger protein ATL54-like...   259   2e-66
emb|CAN61577.1| hypothetical protein VITISV_008030 [Vitis vinifera]   259   2e-66
ref|XP_002301077.1| predicted protein [Populus trichocarpa] gi|2...   254   4e-65

>ref|XP_003632477.1| PREDICTED: uncharacterized protein LOC100854068 [Vitis vinifera]
          Length = 372

 Score =  298 bits (762), Expect = 4e-78
 Identities = 169/361 (46%), Positives = 223/361 (61%), Gaps = 15/361 (4%)
 Frame = +1

Query: 310  PDEPESKQKSQISPVVIIIVAILGGCFLLVSYYAIIVKYCSNWNRSRR--PQVLNEQNLD 483
            P  P   +  +ISP++I IV  LG  F +VS   +++KY S WNRSRR  P V N     
Sbjct: 23   PPPPPPLRPHEISPILIFIVCTLGAVFFVVSCCTVVLKYYSGWNRSRRSDPPVQNH---- 78

Query: 484  AHEDFLDENHGPIVDHPIWYITTVGLEQGVIDSIAVVKYKKGDGLVEGTDCSVCLGEFQD 663
             HEDF+DE   P+V HPIW I TVGL+Q VID I V+KY K +GL+EGT+CSVCLGEF++
Sbjct: 79   THEDFIDEEQSPVVYHPIWLINTVGLQQSVIDLITVIKYNKEEGLIEGTECSVCLGEFEE 138

Query: 664  DENLRLLPKCSHAFHISCIDTWLRSHTNCPSCRAPIVSSPV---LPASTAVVGNSGVREE 834
            DE+LRLLPKCSHAFH+ CIDTWLRSH NCP CRAPI+   V   L A      +SG RE+
Sbjct: 139  DESLRLLPKCSHAFHVPCIDTWLRSHKNCPLCRAPIIHENVGSHLNAVEQDSNDSGSRED 198

Query: 835  AQVENSANDGGVGSELNREGGVSDLSLGVQGERVEVERSRGIDVQKKDLP-TPFKMSEFR 1011
             +++NS    G+GS    EGG +++ +GV    + VE +R  ++ +K LP       E R
Sbjct: 199  MEIDNSETHSGLGSSEVGEGGTAEVGVGV----LAVEEARTNEIVRKGLPYMNAGKYELR 254

Query: 1012 VFSDLSDNHRVGENKIQPVRRSASMDFNPASILCFSVANSLPVEEEDEGSSIAPVERGKK 1191
            V SDL DNHR  E +I+PVRRS SMD + AS +  ++AN++PVE   EG+S      GKK
Sbjct: 255  VLSDLVDNHRASEEQIEPVRRSVSMDLSAASEIYLAMANAVPVEH--EGTSDMRSVPGKK 312

Query: 1192 LN---------SSPSLFRLIXXXXXXXXXXXXXVSMKRSFSSGNKLISSKHSRNRSSFIT 1344
            LN          + SL++L+             +SMK+S SS   + SS+ SR+R S + 
Sbjct: 313  LNLEIVARQSCRNSSLYKLMKSSSIGCSLHRGPLSMKKSLSS-FPMFSSRRSRSRDSILP 371

Query: 1345 L 1347
            L
Sbjct: 372  L 372


>emb|CAN61677.1| hypothetical protein VITISV_018326 [Vitis vinifera]
          Length = 371

 Score =  273 bits (699), Expect = 8e-71
 Identities = 160/332 (48%), Positives = 207/332 (62%), Gaps = 15/332 (4%)
 Frame = +1

Query: 397  VSYYAIIVKYCSNWNRSRR--PQVLNEQNLDAHEDFLDENHGPIVDHPIWYITTVGLEQG 570
            V+ + I V Y S WNRSRR  P V N      HEDF+DE   P+V HPIW I TVGL+Q 
Sbjct: 52   VALFRIEVTY-SGWNRSRRSDPPVQNH----THEDFIDEEQSPVVYHPIWLINTVGLQQS 106

Query: 571  VIDSIAVVKYKKGDGLVEGTDCSVCLGEFQDDENLRLLPKCSHAFHISCIDTWLRSHTNC 750
            VID I V+KY K +GL+EGT+CSVCLGEF++DE+LRLLPKCSHAFH+ CIDTWLRSH NC
Sbjct: 107  VIDLITVIKYNKEEGLIEGTECSVCLGEFEEDESLRLLPKCSHAFHVPCIDTWLRSHKNC 166

Query: 751  PSCRAPIVSSPV---LPASTAVVGNSGVREEAQVENSANDGGVGSELNREGGVSDLSLGV 921
            P CRAPI+   V   L A      +SG RE+ +++NS    G+GS    EGG +++ +GV
Sbjct: 167  PLCRAPIIHENVGSHLNAVEQDSNDSGSREDMEIDNSETHSGLGSSEVGEGGAAEVGVGV 226

Query: 922  QGERVEVERSRGIDVQKKDLP-TPFKMSEFRVFSDLSDNHRVGENKIQPVRRSASMDFNP 1098
                + VE +R  ++ +K LP       E RV SDL DNHR  E +I+PVRRS SMD + 
Sbjct: 227  ----MAVEEARTNEIVRKGLPYMNAGKYELRVLSDLVDNHRASEEQIEPVRRSVSMDLSA 282

Query: 1099 ASILCFSVANSLPVEEEDEGSSIAPVERGKKLN---------SSPSLFRLIXXXXXXXXX 1251
            AS +C ++AN++PVE   EG+S      GKKLN          + SL++L+         
Sbjct: 283  ASEICLAMANAVPVEH--EGTSDMRSVPGKKLNLEIVARQSXXNSSLYKLMKSSSIGCSX 340

Query: 1252 XXXXVSMKRSFSSGNKLISSKHSRNRSSFITL 1347
                +SMK+S SS     SS+ SR+R S + L
Sbjct: 341  HRGPLSMKKSLSS-FXXFSSRRSRSRDSILPL 371


>ref|XP_003634417.1| PREDICTED: RING-H2 finger protein ATL54-like [Vitis vinifera]
          Length = 404

 Score =  259 bits (661), Expect = 2e-66
 Identities = 151/354 (42%), Positives = 208/354 (58%), Gaps = 12/354 (3%)
 Frame = +1

Query: 322  ESKQKSQISPVVIIIVAILGGCFLLVSYYAIIVKYCSNWNRSRRPQVLNEQNLDAHEDFL 501
            +      ISP VII VA+L G FLLV + AIIVKYC  W R  R         D  E+FL
Sbjct: 58   DQNDSPNISPYVIITVALLAGFFLLVCFNAIIVKYCCGWRRRNRSPPSESDGRD--EEFL 115

Query: 502  DENHGPIVDHPIWYITTVGLEQGVIDSIAVVKYKKGDGLVEGTDCSVCLGEFQDDENLRL 681
            DEN GP +DHPIW+ITT GL+Q +I+SI V KYK+G+GL+EGT+CSVCL EFQ+DE LRL
Sbjct: 116  DENRGPAIDHPIWFITTAGLQQAIINSITVCKYKRGEGLIEGTECSVCLSEFQEDETLRL 175

Query: 682  LPKCSHAFHISCIDTWLRSHTNCPSCRAPIVSSPVLPASTAVVGNS---GVREEAQVENS 852
            LPKC+HAFHI CIDTWL SHTNCP CRA I+S  V P   +   NS   G  E+ Q+ENS
Sbjct: 176  LPKCNHAFHIPCIDTWLSSHTNCPLCRARIISDIVNPPLESNDQNSRSLGPNEQTQMENS 235

Query: 853  ANDGGVGSELNREGGVSDLSLGVQGERVEVERSRGIDVQKKDLPTPFKMSEFRVFSDLSD 1032
            +ND  + + L R  GV + ++G +G   E++        K+ + +   +    V  + ++
Sbjct: 236  SNDTELDNNLVRSRGVYESTVG-RGGTGELQILDDERTSKEGVNSNGDV-VLEVNGNSAN 293

Query: 1033 NHRVGENKIQPVRRSASMDFNPASILCFSVANSLPVEEEDEGSSIAPVERGKKLNSS--- 1203
            NH V +++IQPVRRS SMD + A+ + F +A      +E +G+ +     G+K +S    
Sbjct: 294  NH-VVDSEIQPVRRSVSMDSSSAATIFFGLAKF--HADESKGNWVDETMDGRKFDSGSVP 350

Query: 1204 ------PSLFRLIXXXXXXXXXXXXXVSMKRSFSSGNKLISSKHSRNRSSFITL 1347
                   S FR +             +SMKRS S G +    +H+R+ ++ + L
Sbjct: 351  KRDVAYTSTFRQMGSPSIAQCLHKGPISMKRSNSCGGRFFLPRHNRSTNAILPL 404


>emb|CAN61577.1| hypothetical protein VITISV_008030 [Vitis vinifera]
          Length = 404

 Score =  259 bits (661), Expect = 2e-66
 Identities = 151/354 (42%), Positives = 208/354 (58%), Gaps = 12/354 (3%)
 Frame = +1

Query: 322  ESKQKSQISPVVIIIVAILGGCFLLVSYYAIIVKYCSNWNRSRRPQVLNEQNLDAHEDFL 501
            +      ISP VII VA+L G FLLV + AIIVKYC  W R  R         D  E+FL
Sbjct: 58   DQNDSPNISPYVIITVALLAGFFLLVCFNAIIVKYCCGWRRRNRSPPSESDGRD--EEFL 115

Query: 502  DENHGPIVDHPIWYITTVGLEQGVIDSIAVVKYKKGDGLVEGTDCSVCLGEFQDDENLRL 681
            DEN GP +DHPIW+ITT GL+Q +I+SI V KYK+G+GL+EGT+CSVCL EFQ+DE LRL
Sbjct: 116  DENRGPAIDHPIWFITTAGLQQAIINSITVCKYKRGEGLIEGTECSVCLSEFQEDETLRL 175

Query: 682  LPKCSHAFHISCIDTWLRSHTNCPSCRAPIVSSPVLPASTAVVGNS---GVREEAQVENS 852
            LPKC+HAFHI CIDTWL SHTNCP CRA I+S  V P   +   NS   G  E+ Q+ENS
Sbjct: 176  LPKCNHAFHIPCIDTWLSSHTNCPLCRARIISDIVNPPLESNDQNSRSLGPNEQTQMENS 235

Query: 853  ANDGGVGSELNREGGVSDLSLGVQGERVEVERSRGIDVQKKDLPTPFKMSEFRVFSDLSD 1032
            +ND  + + L R  GV + ++G +G   E++        K+ + +   +    V  + ++
Sbjct: 236  SNDTELXNNLVRSRGVYESTVG-RGGTGELQILDDERTSKEGVNSNGDV-VLEVNGNSAN 293

Query: 1033 NHRVGENKIQPVRRSASMDFNPASILCFSVANSLPVEEEDEGSSIAPVERGKKLNSS--- 1203
            NH V +++IQPVRRS SMD + A+ + F +A      +E +G+ +     G+K +S    
Sbjct: 294  NH-VVDSEIQPVRRSVSMDSSSAATIFFGLAKF--HADESKGNWVDETMDGRKFDSGSVP 350

Query: 1204 ------PSLFRLIXXXXXXXXXXXXXVSMKRSFSSGNKLISSKHSRNRSSFITL 1347
                   S FR +             +SMKRS S G +    +H+R+ ++ + L
Sbjct: 351  KRDVAYTSTFRQMGSPSIAQCLHKGPISMKRSNSCGGRFFLPRHNRSTNAILPL 404


>ref|XP_002301077.1| predicted protein [Populus trichocarpa] gi|222842803|gb|EEE80350.1|
            predicted protein [Populus trichocarpa]
          Length = 389

 Score =  254 bits (650), Expect = 4e-65
 Identities = 149/359 (41%), Positives = 203/359 (56%), Gaps = 13/359 (3%)
 Frame = +1

Query: 310  PDEPESKQKSQISPVVIIIVAILGGCFLLVSYYAIIVKYCSNWNRSRRPQVLNEQNLDAH 489
            P  P   Q+  +SP VIIIVA+L   FL+VSYY I+ K CS W  SR       Q  D  
Sbjct: 46   PPPPFLPQEHHLSPYVIIIVALLASFFLIVSYYVIVAKSCSGWCGSRNNTEPQAQEDDTD 105

Query: 490  EDFLDENHGPIVDHPIWYITTVGLEQGVIDSIAVVKYKKGDGLVEGTDCSVCLGEFQDDE 669
            E+FLDEN    VDHPIW+ITT+GL+Q +I+SI V KYKKG+GL+EGT+CSVCL EFQ DE
Sbjct: 106  EEFLDENR---VDHPIWFITTIGLQQSIINSITVCKYKKGEGLIEGTECSVCLSEFQQDE 162

Query: 670  NLRLLPKCSHAFHISCIDTWLRSHTNCPSCRAPIVSSPVLPASTAVVG------NSGVRE 831
             LRLLPKC+HAFHISCIDTWLRSHTNCP CR  I++    PAST ++       N     
Sbjct: 163  TLRLLPKCNHAFHISCIDTWLRSHTNCPLCRTHIING---PASTPLISVGQNHDNLNPTF 219

Query: 832  EAQVENSANDGGVG-SELNREGGVSDLSLGVQGERVEVERSRGIDVQKKDLPTPFKMSEF 1008
              Q+ENS  D G+G ++ + E   +       GE ++V   R +    KD      + + 
Sbjct: 220  STQMENSDVDSGLGNNQESNEPCENRAGTEEVGEILQVGEERTL----KDEVNSNDIGDL 275

Query: 1009 RVFSDLSDNHRVGENKIQPVRRSASMDFNPASILCF------SVANSLPVEEEDEGSSIA 1170
            +V     D H+  +N I+ +RRS+SMD   A+ +C       ++ N + ++EE + + + 
Sbjct: 276  QVLCSSVDKHQAEDNDIKLLRRSSSMDSLRATTMCIGLNDHKNLVNQIDIDEERKSNMVL 335

Query: 1171 PVERGKKLNSSPSLFRLIXXXXXXXXXXXXXVSMKRSFSSGNKLISSKHSRNRSSFITL 1347
                 K+     S+F+L              VSMKRSFS G +  SS+ + +    + L
Sbjct: 336  -----KRDGGYSSVFKLTGTSSFSLSLHKGPVSMKRSFSCGGRFFSSRQNPSLKPILPL 389


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