BLASTX nr result

ID: Coptis21_contig00003557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003557
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275510.1| PREDICTED: V-type proton ATPase subunit C [V...   127   7e-28
ref|XP_002328918.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28
ref|XP_002889973.1| de-etiolated 3 [Arabidopsis lyrata subsp. ly...   125   3e-27
ref|XP_003553974.1| PREDICTED: V-type proton ATPase subunit C-li...   125   5e-27
ref|XP_003548028.1| PREDICTED: V-type proton ATPase subunit C-li...   125   5e-27

>ref|XP_002275510.1| PREDICTED: V-type proton ATPase subunit C [Vitis vinifera]
           gi|296082286|emb|CBI21291.3| unnamed protein product
           [Vitis vinifera]
          Length = 375

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/70 (84%), Positives = 66/70 (94%)
 Frame = +2

Query: 2   LERLLRDQESLRSSLLQWCYTCYGEVFSAWMHFCAVSIFAESILRYGLPPSFLAVVLAPS 181
           LE+L+RDQE+ RS+LLQWCYT YGEVFS+WMHFCAV +FAESILRYGLPPSFLA VLAPS
Sbjct: 264 LEKLMRDQETFRSTLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLAPS 323

Query: 182 VKNEKKVRSI 211
           VK+EKKVRSI
Sbjct: 324 VKSEKKVRSI 333


>ref|XP_002328918.1| predicted protein [Populus trichocarpa] gi|222839348|gb|EEE77685.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  127 bits (319), Expect = 9e-28
 Identities = 59/70 (84%), Positives = 66/70 (94%)
 Frame = +2

Query: 2   LERLLRDQESLRSSLLQWCYTCYGEVFSAWMHFCAVSIFAESILRYGLPPSFLAVVLAPS 181
           LER+++DQESLRSSLLQWCYT YGEVFS+WMHFCAV +FAESILRYGLPPSFLA VL+PS
Sbjct: 264 LERIVQDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRVFAESILRYGLPPSFLACVLSPS 323

Query: 182 VKNEKKVRSI 211
           +K EKKVRSI
Sbjct: 324 LKGEKKVRSI 333


>ref|XP_002889973.1| de-etiolated 3 [Arabidopsis lyrata subsp. lyrata]
           gi|297335815|gb|EFH66232.1| de-etiolated 3 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 378

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/70 (82%), Positives = 67/70 (95%)
 Frame = +2

Query: 2   LERLLRDQESLRSSLLQWCYTCYGEVFSAWMHFCAVSIFAESILRYGLPPSFLAVVLAPS 181
           LE+L++DQESLRSSLLQWCYT YGEVFS+WMHFCAV IFAESI+RYGLPP+FLA VL+P+
Sbjct: 264 LEKLVQDQESLRSSLLQWCYTSYGEVFSSWMHFCAVRIFAESIMRYGLPPAFLACVLSPA 323

Query: 182 VKNEKKVRSI 211
           VK+EKKVRSI
Sbjct: 324 VKSEKKVRSI 333


>ref|XP_003553974.1| PREDICTED: V-type proton ATPase subunit C-like [Glycine max]
          Length = 377

 Score =  125 bits (313), Expect = 5e-27
 Identities = 58/70 (82%), Positives = 66/70 (94%)
 Frame = +2

Query: 2   LERLLRDQESLRSSLLQWCYTCYGEVFSAWMHFCAVSIFAESILRYGLPPSFLAVVLAPS 181
           L++L++DQE LR+SLLQWCYT YGEVFS+WMHFCAV +FAESILRYGLPPSFLA VLAPS
Sbjct: 265 LDKLVQDQERLRTSLLQWCYTSYGEVFSSWMHFCAVRLFAESILRYGLPPSFLACVLAPS 324

Query: 182 VKNEKKVRSI 211
           VK+EKKVRSI
Sbjct: 325 VKSEKKVRSI 334


>ref|XP_003548028.1| PREDICTED: V-type proton ATPase subunit C-like [Glycine max]
          Length = 375

 Score =  125 bits (313), Expect = 5e-27
 Identities = 59/70 (84%), Positives = 63/70 (90%)
 Frame = +2

Query: 2   LERLLRDQESLRSSLLQWCYTCYGEVFSAWMHFCAVSIFAESILRYGLPPSFLAVVLAPS 181
           LE+L+ DQESLR SLLQWCYT YGEVFS+WMHFCAV +F ESILRYGLPPSFLA VLAPS
Sbjct: 264 LEKLVEDQESLRGSLLQWCYTSYGEVFSSWMHFCAVRVFTESILRYGLPPSFLACVLAPS 323

Query: 182 VKNEKKVRSI 211
           VK EKKVRSI
Sbjct: 324 VKAEKKVRSI 333


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