BLASTX nr result

ID: Coptis21_contig00003550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003550
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311052.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002311050.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002311048.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002311052.1| predicted protein [Populus trichocarpa] gi|222850872|gb|EEE88419.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
 Frame = -3

Query: 251 LLVIMFMLPSLLFSKPNGKSFD-IQHLEGSHXXXXXXXXXXXXQYLERFGYLHYXXXXXX 75
           +L+++ M    + SKP+G  F  I+HLEG H            +YLE+FGYL Y      
Sbjct: 12  ILLLVAMQSRTIQSKPSGDPFGFIKHLEGCHKNGSVKGLHELKRYLEKFGYLKYGHQGKK 71

Query: 74  XXXXXD--VFDDLLESAVKEYQLNH 6
                +   FDDLLESA+K YQ NH
Sbjct: 72  GHNHANDDEFDDLLESAIKAYQQNH 96


>ref|XP_002311050.1| predicted protein [Populus trichocarpa] gi|222850870|gb|EEE88417.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
 Frame = -3

Query: 251 LLVIMFMLPSLLFSKPNGKSFD-IQHLEGSHXXXXXXXXXXXXQYLERFGYLHYXXXXXX 75
           +L+++ M    + SKP+G  F  I+HLEG H            +YLE+FGYL Y      
Sbjct: 12  ILLLVAMQSRTIQSKPSGDPFGFIKHLEGCHRNVSVKGLHELKRYLEKFGYLKYGHQGKK 71

Query: 74  XXXXXD--VFDDLLESAVKEYQLNH 6
                +   FDDLLESA+K YQ NH
Sbjct: 72  GHNHANDDEFDDLLESAIKAYQQNH 96


>ref|XP_002311048.1| predicted protein [Populus trichocarpa] gi|222850868|gb|EEE88415.1|
           predicted protein [Populus trichocarpa]
          Length = 259

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
 Frame = -3

Query: 251 LLVIMFMLPSLLFSKPNGKSFD-IQHLEGSHXXXXXXXXXXXXQYLERFGYLHYXXXXXX 75
           +L+++ M    + SKP+G  F  I+HLEG H            +YLE+FGYL Y      
Sbjct: 12  ILLLVAMQSRTIQSKPSGDPFGFIKHLEGCHRNVSVKGLHELKRYLEKFGYLKYGHQGKK 71

Query: 74  XXXXXD--VFDDLLESAVKEYQLNH 6
                +   FDDLLESA+K YQ NH
Sbjct: 72  GHNHANDDEFDDLLESAIKAYQQNH 96


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