BLASTX nr result

ID: Coptis21_contig00003538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003538
         (1078 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298567.1| predicted protein [Populus trichocarpa] gi|2...   415   e-113
ref|XP_002272025.1| PREDICTED: uncharacterized protein LOC100250...   414   e-113
emb|CBI34830.3| unnamed protein product [Vitis vinifera]              413   e-113
emb|CAN73551.1| hypothetical protein VITISV_005967 [Vitis vinifera]   406   e-111
gb|AFK35898.1| unknown [Lotus japonicus]                              388   e-105

>ref|XP_002298567.1| predicted protein [Populus trichocarpa] gi|222845825|gb|EEE83372.1|
           predicted protein [Populus trichocarpa]
          Length = 293

 Score =  415 bits (1066), Expect = e-113
 Identities = 203/274 (74%), Positives = 240/274 (87%), Gaps = 3/274 (1%)
 Frame = +1

Query: 118 TGTQLQIETSTFPFTRTSITSSSNTPHENNQTKLSSAGKIKRLVLSQEGRTKLSIAPDRE 297
           T + L  ++  FP T+T+     +T +E+N+T+ SSAGKIKRLVLS+EGRTKL+  PDRE
Sbjct: 25  TISSLPFKSRVFPATKTT-----STLNESNETERSSAGKIKRLVLSKEGRTKLNSYPDRE 79

Query: 298 FYAYPRFVTHVDNGFISTLTDLYRERLKPDWEILDLMSSWISHLPSEVKYKKVVGHGLNA 477
           FY+YPRFVTHVD+GFISTLT+LY+E L+PD EILDLMSSW+SHLP +  YK++VGHGLNA
Sbjct: 80  FYSYPRFVTHVDDGFISTLTNLYQEMLRPDSEILDLMSSWVSHLPKQAVYKRIVGHGLNA 139

Query: 478 QELAKNPRLDYFFVKDLNKDQELEMESSSFDAVLCTVSVQYLQQPEKVFAEVFRVLKPGG 657
           QELA+NPRLDYFFVKDLN+DQ+LE+ESSSFDAVLCTVSVQYLQQPEKVFAEVFRVL+PGG
Sbjct: 140 QELARNPRLDYFFVKDLNQDQKLELESSSFDAVLCTVSVQYLQQPEKVFAEVFRVLRPGG 199

Query: 658 VFIVSFSNRLFYEKAISAWREGTGYSRVQLVVQYFQCVEGFTQPETIRKL---GSGYKSE 828
           VFIVSFSNRLFYEKAISAWR+GTGYSR+QLVVQYFQCVEGFTQ E IRKL    +G + E
Sbjct: 200 VFIVSFSNRLFYEKAISAWRDGTGYSRIQLVVQYFQCVEGFTQAEIIRKLPAAAAGPQQE 259

Query: 829 STTFGWIQRILGLFSGSDPFYAVISYKNYRPIYE 930
            + F WI R+LGL SGSDPFYAV++YKN++P+YE
Sbjct: 260 KSPFSWIMRLLGLVSGSDPFYAVVAYKNFKPVYE 293


>ref|XP_002272025.1| PREDICTED: uncharacterized protein LOC100250829 [Vitis vinifera]
          Length = 309

 Score =  414 bits (1064), Expect = e-113
 Identities = 211/292 (72%), Positives = 241/292 (82%), Gaps = 3/292 (1%)
 Frame = +1

Query: 64  INSYSMLASYLNPIKPFSTGTQLQIETSTFPFTRTSITSS-SNTPHENNQTKLSSAGKIK 240
           I+  +ML  + NP KP+   T      S+ PF   S  S  +N+ +E N+ K SSAGKIK
Sbjct: 21  IDPRTMLTFHPNP-KPWHPSTPTNF--SSIPFKARSFPSRIANSINEKNEPKQSSAGKIK 77

Query: 241 RLVLSQEGRTKLSIAPDREFYAYPRFVTHVDNGFISTLTDLYRERLKPDWEILDLMSSWI 420
           RLVL+QEGRTK +  PDREFYAYPRFVTHVD+GFISTLTDLYRERL P  EILDLMSSW+
Sbjct: 78  RLVLTQEGRTKFNAYPDREFYAYPRFVTHVDSGFISTLTDLYRERLSPGSEILDLMSSWV 137

Query: 421 SHLPSEVKYKKVVGHGLNAQELAKNPRLDYFFVKDLNKDQELEMESSSFDAVLCTVSVQY 600
           SHLP E++YK+VVGHGLNAQELAKNPRLDYFFVKDLN+DQ+LE +S +FDAVLCTVSVQY
Sbjct: 138 SHLPKEIEYKRVVGHGLNAQELAKNPRLDYFFVKDLNQDQKLESDSCNFDAVLCTVSVQY 197

Query: 601 LQQPEKVFAEVFRVLKPGGVFIVSFSNRLFYEKAISAWREGTGYSRVQLVVQYFQCVEGF 780
           LQ PEKVFAEVFRVL+PGGVFIVSFSNRLFYEKAISAWR+GT YSRVQLVVQYFQCVEGF
Sbjct: 198 LQYPEKVFAEVFRVLRPGGVFIVSFSNRLFYEKAISAWRDGTAYSRVQLVVQYFQCVEGF 257

Query: 781 TQPETIRKL--GSGYKSESTTFGWIQRILGLFSGSDPFYAVISYKNYRPIYE 930
           TQPETIRKL   +G + +     WI R+LG  SGSDPFYAVI+YKN++P+YE
Sbjct: 258 TQPETIRKLPATNGAQEDKGPLSWIARLLGFLSGSDPFYAVIAYKNFKPLYE 309


>emb|CBI34830.3| unnamed protein product [Vitis vinifera]
          Length = 284

 Score =  413 bits (1061), Expect = e-113
 Identities = 210/287 (73%), Positives = 238/287 (82%), Gaps = 3/287 (1%)
 Frame = +1

Query: 79  MLASYLNPIKPFSTGTQLQIETSTFPFTRTSITSS-SNTPHENNQTKLSSAGKIKRLVLS 255
           ML  + NP KP+   T      S+ PF   S  S  +N+ +E N+ K SSAGKIKRLVL+
Sbjct: 1   MLTFHPNP-KPWHPSTPTNF--SSIPFKARSFPSRIANSINEKNEPKQSSAGKIKRLVLT 57

Query: 256 QEGRTKLSIAPDREFYAYPRFVTHVDNGFISTLTDLYRERLKPDWEILDLMSSWISHLPS 435
           QEGRTK +  PDREFYAYPRFVTHVD+GFISTLTDLYRERL P  EILDLMSSW+SHLP 
Sbjct: 58  QEGRTKFNAYPDREFYAYPRFVTHVDSGFISTLTDLYRERLSPGSEILDLMSSWVSHLPK 117

Query: 436 EVKYKKVVGHGLNAQELAKNPRLDYFFVKDLNKDQELEMESSSFDAVLCTVSVQYLQQPE 615
           E++YK+VVGHGLNAQELAKNPRLDYFFVKDLN+DQ+LE +S +FDAVLCTVSVQYLQ PE
Sbjct: 118 EIEYKRVVGHGLNAQELAKNPRLDYFFVKDLNQDQKLESDSCNFDAVLCTVSVQYLQYPE 177

Query: 616 KVFAEVFRVLKPGGVFIVSFSNRLFYEKAISAWREGTGYSRVQLVVQYFQCVEGFTQPET 795
           KVFAEVFRVL+PGGVFIVSFSNRLFYEKAISAWR+GT YSRVQLVVQYFQCVEGFTQPET
Sbjct: 178 KVFAEVFRVLRPGGVFIVSFSNRLFYEKAISAWRDGTAYSRVQLVVQYFQCVEGFTQPET 237

Query: 796 IRKL--GSGYKSESTTFGWIQRILGLFSGSDPFYAVISYKNYRPIYE 930
           IRKL   +G + +     WI R+LG  SGSDPFYAVI+YKN++P+YE
Sbjct: 238 IRKLPATNGAQEDKGPLSWIARLLGFLSGSDPFYAVIAYKNFKPLYE 284


>emb|CAN73551.1| hypothetical protein VITISV_005967 [Vitis vinifera]
          Length = 255

 Score =  406 bits (1044), Expect = e-111
 Identities = 198/251 (78%), Positives = 223/251 (88%), Gaps = 2/251 (0%)
 Frame = +1

Query: 184 SNTPHENNQTKLSSAGKIKRLVLSQEGRTKLSIAPDREFYAYPRFVTHVDNGFISTLTDL 363
           +N+ +E N+ K SSAGKIKRLVL+QEGRTK +  PDREFYAYPRFVTHVD+GFISTLTDL
Sbjct: 5   ANSINEKNEPKQSSAGKIKRLVLTQEGRTKFNAYPDREFYAYPRFVTHVDSGFISTLTDL 64

Query: 364 YRERLKPDWEILDLMSSWISHLPSEVKYKKVVGHGLNAQELAKNPRLDYFFVKDLNKDQE 543
           YRERL P  EILDLMSSW+SHLP E++YK+VVGHGLNAQELAKNPRLDYFFVKDLN+DQ+
Sbjct: 65  YRERLSPGSEILDLMSSWVSHLPKEIEYKRVVGHGLNAQELAKNPRLDYFFVKDLNQDQK 124

Query: 544 LEMESSSFDAVLCTVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNRLFYEKAISAWREG 723
           LE +S +FDAVLCTVSVQYLQ PEKVFAEVFRVL+PGGVFIVSFSNRLFYEKAISAWR+G
Sbjct: 125 LESDSCNFDAVLCTVSVQYLQYPEKVFAEVFRVLRPGGVFIVSFSNRLFYEKAISAWRDG 184

Query: 724 TGYSRVQLVVQYFQCVEGFTQPETIRKL--GSGYKSESTTFGWIQRILGLFSGSDPFYAV 897
           T YSRVQLVVQYFQCVEGFTQPETIRKL   +G + +     WI R+LG  SGSDPFYAV
Sbjct: 185 TAYSRVQLVVQYFQCVEGFTQPETIRKLPATNGAQEDKGPLSWIARLLGFLSGSDPFYAV 244

Query: 898 ISYKNYRPIYE 930
           I+YKN++P+YE
Sbjct: 245 IAYKNFKPLYE 255


>gb|AFK35898.1| unknown [Lotus japonicus]
          Length = 272

 Score =  388 bits (996), Expect = e-105
 Identities = 191/251 (76%), Positives = 220/251 (87%), Gaps = 3/251 (1%)
 Frame = +1

Query: 187 NTPHENNQTK-LSSAGKIKRLVLSQEGRTKLSIAPDREFYAYPRFVTHVDNGFISTLTDL 363
           +T +EN QT   SS GKIKRLVL+QEGRTKL+   DR+FYAYPR VTHVD+GFISTLT++
Sbjct: 21  STLNENYQTNPQSSVGKIKRLVLTQEGRTKLNTYSDRDFYAYPRLVTHVDDGFISTLTNV 80

Query: 364 YRERLKPDWEILDLMSSWISHLPSEVKYKKVVGHGLNAQELAKNPRLDYFFVKDLNKDQE 543
           YRERL+PD EILD MSSWISHLP++VKYK+VVGHGLNAQELAKNPRLDYFF+KDLNKDQ+
Sbjct: 81  YRERLRPDTEILDFMSSWISHLPNDVKYKRVVGHGLNAQELAKNPRLDYFFIKDLNKDQQ 140

Query: 544 LEMESSSFDAVLCTVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNRLFYEKAISAWREG 723
           LE+ES SFDAV+CTVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNR+FYEKAIS+WREG
Sbjct: 141 LELESCSFDAVVCTVSVQYLQQPEKVFAEVFRVLKPGGVFIVSFSNRMFYEKAISSWREG 200

Query: 724 TGYSRVQLVVQYFQCVEGFTQPETIRKLGS--GYKSESTTFGWIQRILGLFSGSDPFYAV 897
           T YSRVQLVVQYFQ VEGFT+ E +RKL +  G +   +  GWI  + GL SGSDPFYAV
Sbjct: 201 TAYSRVQLVVQYFQSVEGFTEAEVVRKLPTTKGAQENKSPLGWIMGLFGLLSGSDPFYAV 260

Query: 898 ISYKNYRPIYE 930
           I+Y+N++PI +
Sbjct: 261 IAYRNFKPIQD 271


Top