BLASTX nr result
ID: Coptis21_contig00003534
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003534 (531 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002532258.1| hypothetical protein RCOM_0624800 [Ricinus c... 84 9e-21 ref|XP_002282000.1| PREDICTED: uncharacterized protein LOC100255... 79 5e-18 emb|CBI16250.3| unnamed protein product [Vitis vinifera] 79 5e-18 ref|XP_002307241.1| predicted protein [Populus trichocarpa] gi|2... 75 6e-18 ref|NP_200823.1| uncharacterized protein [Arabidopsis thaliana] ... 76 5e-17 >ref|XP_002532258.1| hypothetical protein RCOM_0624800 [Ricinus communis] gi|223528046|gb|EEF30124.1| hypothetical protein RCOM_0624800 [Ricinus communis] Length = 1044 Score = 83.6 bits (205), Expect(2) = 9e-21 Identities = 39/57 (68%), Positives = 42/57 (73%) Frame = -2 Query: 530 LKPKLNAAPFSDEWLAALEEVGEEILTKKTGAVQNSPSDKSLPEPGPWSSTPR*NGR 360 +KP NA PFSDEWLAA E GEEIL +K GAVQNSP DKSLPEP PWS R N + Sbjct: 967 MKPPSNAVPFSDEWLAAFEAAGEEILARKGGAVQNSPPDKSLPEPSPWSPVRRKNNQ 1023 Score = 41.6 bits (96), Expect(2) = 9e-21 Identities = 17/21 (80%), Positives = 19/21 (90%) Frame = -1 Query: 378 SPVKRKNIQQIGPYDCTKYTN 316 SPV+RKN Q IGPYDCTK+TN Sbjct: 1015 SPVRRKNNQGIGPYDCTKFTN 1035 >ref|XP_002282000.1| PREDICTED: uncharacterized protein LOC100255365 [Vitis vinifera] Length = 1413 Score = 79.3 bits (194), Expect(2) = 5e-18 Identities = 36/48 (75%), Positives = 38/48 (79%) Frame = -2 Query: 527 KPKLNAAPFSDEWLAALEEVGEEILTKKTGAVQNSPSDKSLPEPGPWS 384 KP L A PFSDEWL A+E GEEILT K+GAVQNSP DKS PEP PWS Sbjct: 1338 KPPLGAVPFSDEWLTAIEAAGEEILTLKSGAVQNSPPDKSQPEPSPWS 1385 Score = 36.6 bits (83), Expect(2) = 5e-18 Identities = 16/26 (61%), Positives = 22/26 (84%), Gaps = 1/26 (3%) Frame = -1 Query: 378 SPVKRKNIQQIGPYDCT-KYTNLPPS 304 SPVK+K Q+IGP+DCT K T++PP+ Sbjct: 1385 SPVKKKVNQEIGPFDCTKKLTSIPPA 1410 >emb|CBI16250.3| unnamed protein product [Vitis vinifera] Length = 1132 Score = 79.3 bits (194), Expect(2) = 5e-18 Identities = 36/48 (75%), Positives = 38/48 (79%) Frame = -2 Query: 527 KPKLNAAPFSDEWLAALEEVGEEILTKKTGAVQNSPSDKSLPEPGPWS 384 KP L A PFSDEWL A+E GEEILT K+GAVQNSP DKS PEP PWS Sbjct: 1057 KPPLGAVPFSDEWLTAIEAAGEEILTLKSGAVQNSPPDKSQPEPSPWS 1104 Score = 36.6 bits (83), Expect(2) = 5e-18 Identities = 16/26 (61%), Positives = 22/26 (84%), Gaps = 1/26 (3%) Frame = -1 Query: 378 SPVKRKNIQQIGPYDCT-KYTNLPPS 304 SPVK+K Q+IGP+DCT K T++PP+ Sbjct: 1104 SPVKKKVNQEIGPFDCTKKLTSIPPA 1129 >ref|XP_002307241.1| predicted protein [Populus trichocarpa] gi|222856690|gb|EEE94237.1| predicted protein [Populus trichocarpa] Length = 1273 Score = 75.1 bits (183), Expect(2) = 6e-18 Identities = 36/57 (63%), Positives = 39/57 (68%) Frame = -2 Query: 530 LKPKLNAAPFSDEWLAALEEVGEEILTKKTGAVQNSPSDKSLPEPGPWSSTPR*NGR 360 +KP N PFSDEWLAA E GEEILT K GAV+NSP DK EPGPWS R N + Sbjct: 1196 IKPPPNVVPFSDEWLAAFEAAGEEILTMKGGAVRNSPPDKVQHEPGPWSPVRRKNAQ 1252 Score = 40.4 bits (93), Expect(2) = 6e-18 Identities = 18/27 (66%), Positives = 21/27 (77%), Gaps = 2/27 (7%) Frame = -1 Query: 378 SPVKRKNIQQIGPYDCTKY--TNLPPS 304 SPV+RKN Q IGP+DCTK+ N PPS Sbjct: 1244 SPVRRKNAQGIGPFDCTKFMNNNTPPS 1270 >ref|NP_200823.1| uncharacterized protein [Arabidopsis thaliana] gi|332009903|gb|AED97286.1| uncharacterized protein [Arabidopsis thaliana] Length = 1195 Score = 76.3 bits (186), Expect(2) = 5e-17 Identities = 34/50 (68%), Positives = 40/50 (80%) Frame = -2 Query: 515 NAAPFSDEWLAALEEVGEEILTKKTGAVQNSPSDKSLPEPGPWSSTPR*N 366 NA PFSDEWLAA+E GEEILT K+G VQ+SP++KS PEPGPWS + N Sbjct: 1125 NAVPFSDEWLAAIEAAGEEILTLKSGRVQHSPTEKSAPEPGPWSPVKKSN 1174 Score = 36.2 bits (82), Expect(2) = 5e-17 Identities = 17/27 (62%), Positives = 21/27 (77%), Gaps = 2/27 (7%) Frame = -1 Query: 378 SPVKRKNIQQIGPYDCTKYTN--LPPS 304 SPVK+ N Q +GP+DCTKY N LPP+ Sbjct: 1168 SPVKKSN-QVVGPFDCTKYNNKGLPPA 1193