BLASTX nr result

ID: Coptis21_contig00003528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003528
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280587.1| PREDICTED: uncharacterized protein At1g01500...    77   2e-12
ref|XP_004143843.1| PREDICTED: uncharacterized protein LOC101203...    62   5e-08
ref|NP_194142.1| uncharacterized protein [Arabidopsis thaliana] ...    55   7e-06
dbj|BAC42625.1| unknown protein [Arabidopsis thaliana]                 55   9e-06

>ref|XP_002280587.1| PREDICTED: uncharacterized protein At1g01500-like [Vitis vinifera]
          Length = 250

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 44/86 (51%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
 Frame = +2

Query: 5   NGFYY-QQDRLKIKVFYLRLSI*NNTRKPLPETITLRYLPRISENPLEINDAKIRSDADA 181
           +GF+  ++DRLKI+ FYLRLS+ ++  K +P+++TL YLPRI+ +PLE+ D+KIR   D+
Sbjct: 8   HGFHRDERDRLKIRGFYLRLSV-SDWNKSVPDSLTLVYLPRINGSPLEVADSKIR--PDS 64

Query: 182 DAYITLHRVRSAETNEEAVFTSRERV 259
            +++TLHR+ SA    +AVF SRERV
Sbjct: 65  ASFVTLHRIVSA----DAVFASRERV 86



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 6/98 (6%)
 Frame = +1

Query: 265 VGIKDAEVFVLAEGHVGIIDKVDMSXXXXXXXXXXFKGLDEIPEETELEV----CD-YCV 429
           V + + EV V  EGHV + + V+M+           + L+EIPEE E+E     C+ +C 
Sbjct: 131 VSVSEVEVCVAVEGHVAMSEMVEMAVKRKAKARA-IQPLEEIPEEREVETESDGCNCFCE 189

Query: 430 DEMESEFDG-AQDCNELSKDMEIQLEGVKWAVDEGLFV 540
           ++ E +++    DC   SK+ME+ +EG  WAVD G++V
Sbjct: 190 EDEEKDYESDGGDCEVNSKEMEMDIEGFGWAVDLGIWV 227


>ref|XP_004143843.1| PREDICTED: uncharacterized protein LOC101203014 [Cucumis sativus]
           gi|449509396|ref|XP_004163576.1| PREDICTED:
           uncharacterized protein LOC101227908 [Cucumis sativus]
          Length = 256

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
 Frame = +2

Query: 17  YQQDRLKIKVFYLRLSI*NNTRKPLPETITLRYLPRISENPLEINDAKIRSDADADAYIT 196
           +  DRLKIK F++R S       P PE++TL YLPRI E  LEI+  KIR   D+ A++T
Sbjct: 10  FAADRLKIKAFFVRFSH-LQLLDPPPESLTLFYLPRIDETDLEIDGLKIR--PDSPAFVT 66

Query: 197 LHRV--RSAETNEEAVFTSRERV 259
           LHRV   S+   +   F SRERV
Sbjct: 67  LHRVVSPSSRMKKGVEFGSRERV 89


>ref|NP_194142.1| uncharacterized protein [Arabidopsis thaliana]
           gi|2262106|gb|AAB63614.1| hypothetical protein
           [Arabidopsis thaliana] gi|5668639|emb|CAB51654.1|
           putative protein [Arabidopsis thaliana]
           gi|7269260|emb|CAB81329.1| putative protein [Arabidopsis
           thaliana] gi|332659451|gb|AEE84851.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 250

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/82 (40%), Positives = 53/82 (64%)
 Frame = +2

Query: 14  YYQQDRLKIKVFYLRLSI*NNTRKPLPETITLRYLPRISENPLEINDAKIRSDADADAYI 193
           Y +++ LK+K F++R +    TR  LP+++TL Y PRI+E   E++ +KIR   D+ A++
Sbjct: 10  YVEKESLKVKAFFVRFTG-LPTRGFLPDSLTLLYPPRINEAAFELDGSKIR--PDSPAFV 66

Query: 194 TLHRVRSAETNEEAVFTSRERV 259
           TLHRV       + ++ SRERV
Sbjct: 67  TLHRV---VKGGDVIYGSRERV 85


>dbj|BAC42625.1| unknown protein [Arabidopsis thaliana]
          Length = 250

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 33/82 (40%), Positives = 53/82 (64%)
 Frame = +2

Query: 14  YYQQDRLKIKVFYLRLSI*NNTRKPLPETITLRYLPRISENPLEINDAKIRSDADADAYI 193
           Y +++ LK+K F++R +    TR  LP+++TL Y PRI+E   E++ +KIR   D+ A++
Sbjct: 10  YVEKESLKVKAFFVRFTG-LPTRGFLPDSLTLLYPPRINEAAFELDGSKIR--PDSPAFV 66

Query: 194 TLHRVRSAETNEEAVFTSRERV 259
           TLHRV       + ++ SRERV
Sbjct: 67  TLHRV---VKGGDEIYGSRERV 85


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