BLASTX nr result

ID: Coptis21_contig00003518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003518
         (1047 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266063.2| PREDICTED: probable lysine-specific demethyl...   427   e-117
ref|XP_003555549.1| PREDICTED: probable lysine-specific demethyl...   422   e-116
ref|XP_003535393.1| PREDICTED: probable lysine-specific demethyl...   420   e-115
ref|XP_002521976.1| transcription factor, putative [Ricinus comm...   419   e-115
ref|XP_002319654.1| jumonji domain protein [Populus trichocarpa]...   417   e-114

>ref|XP_002266063.2| PREDICTED: probable lysine-specific demethylase JMJ14-like [Vitis
            vinifera]
          Length = 1271

 Score =  427 bits (1099), Expect = e-117
 Identities = 218/359 (60%), Positives = 254/359 (70%), Gaps = 10/359 (2%)
 Frame = +1

Query: 1    KDAIKYIATIRPRVEKFGICRIVXXXXXXXXXXLKEKTIWENLKFSTHIQQIDKLQCRDP 180
            +D +KYIA+IR R E +GICRIV          LKEK IWE  KF+T IQ++DKLQ RD 
Sbjct: 151  EDTLKYIASIRSRAEPYGICRIVPPSSWKPPCPLKEKNIWEGSKFATRIQRVDKLQNRDS 210

Query: 181  TS----THRNLKRKRKNFEETGVQRDTDN-GVIPKPNHLDCGN----KAKLFGFEPGPDF 333
                       +RKR+    TG+        V+   + L  G       + FGFEPGP+F
Sbjct: 211  MRKMPRVQNQTRRKRRRCMGTGIDFGPGTEDVLGTADVLGLGQVGSCDGETFGFEPGPEF 270

Query: 334  TLEAFQKYADDFKSRYFGNDHNIAKDAGQAMLQMQ-RELSVEDIEGEYWRMVEKPTDEIE 510
            TL+AFQKYADDF+++YF  + N     G   +  + RE SVE+IEGEYWR+VEKPT+EIE
Sbjct: 271  TLDAFQKYADDFRAQYFSKNGNATDLRGNMTISQELREPSVENIEGEYWRIVEKPTEEIE 330

Query: 511  VLYGADLDTRVFGSGFPKVSPPMDNSDDEEIYTKSDWNLNNFPRLPHSLLSFEKSDIPGV 690
            VLYGADL+T  FGSGFPKVS P+ ++ DE  YTKS WNLNNFPRLP S+L+FE  DI GV
Sbjct: 331  VLYGADLETGDFGSGFPKVSNPVGSTSDER-YTKSGWNLNNFPRLPGSVLAFESGDISGV 389

Query: 691  LVPWLYIGMCFSSFCWNVEDHYLYSLNYMHWGAPKVWYGVQGGDAQKLEAAMKHHLPALF 870
            LVPWLYIGMCFSSFCW+VEDH+LYSLNYMHWGAPK+WYGV G DA KLEAAM+  LP LF
Sbjct: 390  LVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKIWYGVPGQDALKLEAAMRKRLPDLF 449

Query: 871  REQPDLLDKLVTQXXXXXXXXXXXXVYRCVQNPKEFVLTFPRAYYSGFSCGFNCAEAVN 1047
             EQPDLL KLVTQ            VYRCVQNP EFVLTFPRAY+SGF+CGFNCAEAVN
Sbjct: 450  EEQPDLLHKLVTQLSPSIVKFEGVPVYRCVQNPGEFVLTFPRAYHSGFNCGFNCAEAVN 508


>ref|XP_003555549.1| PREDICTED: probable lysine-specific demethylase JMJ14-like [Glycine
            max]
          Length = 1257

 Score =  422 bits (1085), Expect = e-116
 Identities = 211/354 (59%), Positives = 253/354 (71%), Gaps = 5/354 (1%)
 Frame = +1

Query: 1    KDAIKYIATIRPRVEKFGICRIVXXXXXXXXXXLKEKTIWENLKFSTHIQQIDKLQCRDP 180
            +D +KYI++IR + E +GICRIV          LKEK+IWE  KFST +Q+IDKLQ RD 
Sbjct: 158  QDTLKYISSIRSKAEPYGICRIVPPSSWKPPCPLKEKSIWEGSKFSTRVQRIDKLQNRDS 217

Query: 181  ----TSTHRNLKRKRKNFEETGVQRDTDNGVIPKPNHLDCGNKAKLFGFEPGPDFTLEAF 348
                +    N+KRKR+     GV   T  G    PN   C  + + FGFEPGP+FTLE F
Sbjct: 218  MRKMSKIQTNMKRKRRRCTRMGVDNSTRTG----PNAGFC--EVERFGFEPGPEFTLETF 271

Query: 349  QKYADDFKSRYFGNDHNIAK-DAGQAMLQMQRELSVEDIEGEYWRMVEKPTDEIEVLYGA 525
            Q+YA+DF+ +YF  + N++   A   +L    E SVE+IEGEYWRMVE PT+EIEVLYGA
Sbjct: 272  QRYAEDFQLKYFRKNENVSHLGANTTILNGTSEPSVENIEGEYWRMVESPTEEIEVLYGA 331

Query: 526  DLDTRVFGSGFPKVSPPMDNSDDEEIYTKSDWNLNNFPRLPHSLLSFEKSDIPGVLVPWL 705
            DL+T +FGSGFP  S  + ++  E+ Y KS WNLNNF RLP SLLS+E SDI GVLVPWL
Sbjct: 332  DLETGIFGSGFPSKSSQVGSASHEQ-YIKSGWNLNNFARLPGSLLSYESSDISGVLVPWL 390

Query: 706  YIGMCFSSFCWNVEDHYLYSLNYMHWGAPKVWYGVQGGDAQKLEAAMKHHLPALFREQPD 885
            Y+GMCFSSFCW+VEDH+LYSLNY+HWGAPK+WYGV G DA KLE AM+ HLP LF EQPD
Sbjct: 391  YVGMCFSSFCWHVEDHHLYSLNYLHWGAPKMWYGVPGKDACKLEEAMRKHLPELFEEQPD 450

Query: 886  LLDKLVTQXXXXXXXXXXXXVYRCVQNPKEFVLTFPRAYYSGFSCGFNCAEAVN 1047
            LL KLVTQ            VYRC+QNP +FVLTFPRAY+SGF+CGFNCAEAVN
Sbjct: 451  LLHKLVTQLSPSILKSKGVPVYRCIQNPGDFVLTFPRAYHSGFNCGFNCAEAVN 504


>ref|XP_003535393.1| PREDICTED: probable lysine-specific demethylase JMJ14-like [Glycine
            max]
          Length = 1257

 Score =  420 bits (1080), Expect = e-115
 Identities = 212/354 (59%), Positives = 252/354 (71%), Gaps = 5/354 (1%)
 Frame = +1

Query: 1    KDAIKYIATIRPRVEKFGICRIVXXXXXXXXXXLKEKTIWENLKFSTHIQQIDKLQCRDP 180
            +D +KYI++IR R E +GICRIV          LKEK+IWE  KFST +Q+IDKLQ R+ 
Sbjct: 158  QDTLKYISSIRSRAESYGICRIVPPSSWKPPCPLKEKSIWEGSKFSTRVQRIDKLQNRNS 217

Query: 181  T----STHRNLKRKRKNFEETGVQRDTDNGVIPKPNHLDCGNKAKLFGFEPGPDFTLEAF 348
                     N+KRKR+     GV    DN +   PN   C  +A+ FGFEPGP+FTLE F
Sbjct: 218  MRKMPKIQTNMKRKRRRCTRMGV----DNSIRTGPNAGFC--EAERFGFEPGPEFTLETF 271

Query: 349  QKYADDFKSRYFGNDHNIAK-DAGQAMLQMQRELSVEDIEGEYWRMVEKPTDEIEVLYGA 525
            Q+YA+DF+ +YF  + N++   A   +L    E SVE+IEGEYWRMVE PT+EIEVLYGA
Sbjct: 272  QRYAEDFQLKYFRKNENVSHLGANTTILNGTSEPSVENIEGEYWRMVESPTEEIEVLYGA 331

Query: 526  DLDTRVFGSGFPKVSPPMDNSDDEEIYTKSDWNLNNFPRLPHSLLSFEKSDIPGVLVPWL 705
            DL+T +FGSGFP  S  + ++  E+ Y KS WNLNNF RLP SLLS E  DI GVLVPWL
Sbjct: 332  DLETGIFGSGFPSKSSQVGSASHEQ-YIKSGWNLNNFARLPGSLLSHESCDISGVLVPWL 390

Query: 706  YIGMCFSSFCWNVEDHYLYSLNYMHWGAPKVWYGVQGGDAQKLEAAMKHHLPALFREQPD 885
            Y+GMCFSSFCW+VEDH+LYSLNYMHWGAPK+WYGV G DA KLE AM+ HLP LF EQPD
Sbjct: 391  YVGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKDACKLEEAMRKHLPELFEEQPD 450

Query: 886  LLDKLVTQXXXXXXXXXXXXVYRCVQNPKEFVLTFPRAYYSGFSCGFNCAEAVN 1047
            LL KLVTQ            VYRC+QNP +FVLTFPRAY+SGF+CGFNCAEAVN
Sbjct: 451  LLHKLVTQLSPSILKSKGVPVYRCIQNPGDFVLTFPRAYHSGFNCGFNCAEAVN 504


>ref|XP_002521976.1| transcription factor, putative [Ricinus communis]
            gi|223538780|gb|EEF40380.1| transcription factor,
            putative [Ricinus communis]
          Length = 1202

 Score =  419 bits (1078), Expect = e-115
 Identities = 217/355 (61%), Positives = 252/355 (70%), Gaps = 6/355 (1%)
 Frame = +1

Query: 1    KDAIKYIATIRPRVEKFGICRIVXXXXXXXXXXLKEKTIWENLKFSTHIQQIDKLQCRDP 180
            +D IKYIA+IR + E +GICRIV          LKEK+IWE  KF+T +Q++DKLQ RD 
Sbjct: 153  EDTIKYIASIRLKAEPYGICRIVPPPSWKPPCPLKEKSIWEGSKFATRVQRVDKLQNRDS 212

Query: 181  ----TSTHRNLKRKRKNFEETGVQRDTDNGVIPKPNHLDCGN-KAKLFGFEPGPDFTLEA 345
                +  + + K+KR+      V   TD G I     +D G  +A+ FGFEPGP F+L  
Sbjct: 213  MKKMSRMNNHTKKKRRRCMRMAVDCGTDIGSIS--GCIDVGACEAESFGFEPGPQFSLNT 270

Query: 346  FQKYADDFKSRYFG-NDHNIAKDAGQAMLQMQRELSVEDIEGEYWRMVEKPTDEIEVLYG 522
            FQKYADDFK++YF  ND   +K    A LQ   E +VE+IEGEYWR+VEK T+EIEVLYG
Sbjct: 271  FQKYADDFKAQYFTKNDSITSKAVNTAFLQENWEPTVENIEGEYWRIVEKATEEIEVLYG 330

Query: 523  ADLDTRVFGSGFPKVSPPMDNSDDEEIYTKSDWNLNNFPRLPHSLLSFEKSDIPGVLVPW 702
            ADL+T VFGSGFPK S  +  SD  E Y KS WNLNNFPRLP S+LS+E  DI GVLVPW
Sbjct: 331  ADLETGVFGSGFPKTSGQV-GSDTNERYAKSGWNLNNFPRLPGSVLSYESGDISGVLVPW 389

Query: 703  LYIGMCFSSFCWNVEDHYLYSLNYMHWGAPKVWYGVQGGDAQKLEAAMKHHLPALFREQP 882
            LYIGMCFSSFCW+VEDH+LYSLNYMHWGAPK+WYGV G DA KLE AM+ HLP LF EQP
Sbjct: 390  LYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKIWYGVPGKDAVKLEQAMRKHLPDLFEEQP 449

Query: 883  DLLDKLVTQXXXXXXXXXXXXVYRCVQNPKEFVLTFPRAYYSGFSCGFNCAEAVN 1047
            DLL KLVTQ            VYRC QN  EFVLTFPRAY+SGF+CGFNCAEAVN
Sbjct: 450  DLLHKLVTQLSPSILKSEGVPVYRCKQNTGEFVLTFPRAYHSGFNCGFNCAEAVN 504


>ref|XP_002319654.1| jumonji domain protein [Populus trichocarpa]
            gi|222858030|gb|EEE95577.1| jumonji domain protein
            [Populus trichocarpa]
          Length = 923

 Score =  417 bits (1071), Expect = e-114
 Identities = 212/355 (59%), Positives = 254/355 (71%), Gaps = 6/355 (1%)
 Frame = +1

Query: 1    KDAIKYIATIRPRVEKFGICRIVXXXXXXXXXXLKEKTIWENLKFSTHIQQIDKLQCRDP 180
            +D +KYIA+IRP+ E++GICRIV          LKEKTIWE   F+T +Q++DKLQ RD 
Sbjct: 30   EDTLKYIASIRPKAEQYGICRIVPPPSWKPPCPLKEKTIWEGSTFATRVQRVDKLQNRDS 89

Query: 181  ----TSTHRNLKRKRKNFEETGVQRDTDNGVIPKPNHLDCGN-KAKLFGFEPGPDFTLEA 345
                ++   + ++KR+      V   TD G I   N  D G  +A+ FGFEPGP FTL+ 
Sbjct: 90   MRKRSTMSNHTRKKRRRCMSMAVDCGTDIGSISGSN--DAGVCEAERFGFEPGPLFTLDT 147

Query: 346  FQKYADDFKSRYFG-NDHNIAKDAGQAMLQMQRELSVEDIEGEYWRMVEKPTDEIEVLYG 522
            FQKYADDFK++YF  N++ I K       Q   E ++++IEGEYWR+VEK T+EIEVLYG
Sbjct: 148  FQKYADDFKAQYFRKNENTINKGGDMTTFQKTCEPTLDNIEGEYWRIVEKATEEIEVLYG 207

Query: 523  ADLDTRVFGSGFPKVSPPMDNSDDEEIYTKSDWNLNNFPRLPHSLLSFEKSDIPGVLVPW 702
            ADL+T VFGSGFPK S  + ++ ++  YTKS WNLNNFPRLP S+LSFE  DI GVLVPW
Sbjct: 208  ADLETGVFGSGFPKTSNEVSSATNDR-YTKSGWNLNNFPRLPGSILSFESGDISGVLVPW 266

Query: 703  LYIGMCFSSFCWNVEDHYLYSLNYMHWGAPKVWYGVQGGDAQKLEAAMKHHLPALFREQP 882
            LYIGMCFSSFCW+VEDH+LYSLNYMHWGA K+WYGV G DA KLE  M+ HLP LF EQP
Sbjct: 267  LYIGMCFSSFCWHVEDHHLYSLNYMHWGAQKMWYGVPGKDAIKLEETMRKHLPDLFEEQP 326

Query: 883  DLLDKLVTQXXXXXXXXXXXXVYRCVQNPKEFVLTFPRAYYSGFSCGFNCAEAVN 1047
            DLL KLVTQ            VYRCVQN  EFVLTFPRAY+SGF+CGFNCAEAVN
Sbjct: 327  DLLHKLVTQLSPNILRSEGVPVYRCVQNSGEFVLTFPRAYHSGFNCGFNCAEAVN 381


Top