BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003508
         (851 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide...   203   3e-50
gb|ABK96671.1| unknown [Populus trichocarpa x Populus deltoides]      201   2e-49
gb|ABI14811.1| chloroplast photosystem II light-inducible protei...   201   2e-49
ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736 [Popu...   199   9e-49
gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]...   197   3e-48

>ref|XP_002271791.1| PREDICTED: photosystem II 10 kDa polypeptide, chloroplastic [Vitis
           vinifera] gi|147789486|emb|CAN71762.1| hypothetical
           protein VITISV_021149 [Vitis vinifera]
           gi|296082806|emb|CBI21811.3| unnamed protein product
           [Vitis vinifera]
          Length = 139

 Score =  203 bits (517), Expect = 3e-50
 Identities = 104/139 (74%), Positives = 113/139 (81%), Gaps = 1/139 (0%)
 Frame = -2

Query: 640 MATSVMASLNLKPSPFLEKSAVVRGVPSLARSTSSFKVQASG-KKIKTDSPYGPGGGMNL 464
           MA SVM+SL+LKPSPF  +   VRG+PSLARS+SSF+V+ASG KKIKTD PYG GGGM L
Sbjct: 1   MAASVMSSLSLKPSPFSVERRAVRGLPSLARSSSSFRVEASGGKKIKTDKPYGIGGGMKL 60

Query: 463 RDGLDASGRKPKGKGVYQFADKYGANVDGYSPIYSPEEWAPTGDTYSGGTTGLLIWAVTX 284
            DGLDASGRK KGKGVYQF DKYGANVDGYSPIYSP+EW+P GD Y GGTTGLLIWAVT 
Sbjct: 61  SDGLDASGRKGKGKGVYQFVDKYGANVDGYSPIYSPDEWSPGGDVYVGGTTGLLIWAVTL 120

Query: 283 XXXXXXXXXLVYNTSALAQ 227
                    LVYNTSALAQ
Sbjct: 121 AGLLLGGALLVYNTSALAQ 139


>gb|ABK96671.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 136

 Score =  201 bits (510), Expect = 2e-49
 Identities = 99/138 (71%), Positives = 114/138 (82%)
 Frame = -2

Query: 640 MATSVMASLNLKPSPFLEKSAVVRGVPSLARSTSSFKVQASGKKIKTDSPYGPGGGMNLR 461
           MA SVMASL+LKPSPF  + + VRG+P+L+R T  FK++ASG KIKTD+PYG GGGMNLR
Sbjct: 1   MAASVMASLSLKPSPFTVEKSSVRGLPTLSRRT--FKIEASGVKIKTDTPYGTGGGMNLR 58

Query: 460 DGLDASGRKPKGKGVYQFADKYGANVDGYSPIYSPEEWAPTGDTYSGGTTGLLIWAVTXX 281
           DGLDASGRKPKGKGVYQ+ DKYGANVDGYSPIY+ +EW+PTGD Y+GG TGLLIWAVT  
Sbjct: 59  DGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYAGGKTGLLIWAVTLA 118

Query: 280 XXXXXXXXLVYNTSALAQ 227
                   LVY+TSALAQ
Sbjct: 119 GILAGGALLVYSTSALAQ 136


>gb|ABI14811.1| chloroplast photosystem II light-inducible protein [Pachysandra
           terminalis]
          Length = 138

 Score =  201 bits (510), Expect = 2e-49
 Identities = 102/139 (73%), Positives = 115/139 (82%), Gaps = 1/139 (0%)
 Frame = -2

Query: 640 MATSVMASLNLKPSPFLEKSAVVRGVPSLARSTSSFKVQASG-KKIKTDSPYGPGGGMNL 464
           MATSVM+SL+LK SPFLEKSA  RG+PSLAR +SSF+V+ASG KKIKTD PYG GGGM+L
Sbjct: 1   MATSVMSSLSLKASPFLEKSAA-RGLPSLARPSSSFRVEASGVKKIKTDKPYGTGGGMSL 59

Query: 463 RDGLDASGRKPKGKGVYQFADKYGANVDGYSPIYSPEEWAPTGDTYSGGTTGLLIWAVTX 284
           RDGLDASGRKPKGKGVYQF DKYGANVDGYSPIY   +W+P+G  Y GGTTGLL+WA+T 
Sbjct: 60  RDGLDASGRKPKGKGVYQFVDKYGANVDGYSPIYDQXDWSPSGAVYVGGTTGLLVWAITL 119

Query: 283 XXXXXXXXXLVYNTSALAQ 227
                    LVYNTSAL+Q
Sbjct: 120 AALLLGGALLVYNTSALSQ 138


>ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736 [Populus trichocarpa]
           gi|118487848|gb|ABK95747.1| unknown [Populus
           trichocarpa] gi|222875313|gb|EEF12444.1| hypothetical
           protein POPTRDRAFT_674736 [Populus trichocarpa]
          Length = 137

 Score =  199 bits (505), Expect = 9e-49
 Identities = 100/139 (71%), Positives = 115/139 (82%), Gaps = 1/139 (0%)
 Frame = -2

Query: 640 MATSVMASLNLKPSPFLEKSAVVRGVPSLARSTSSFKVQASG-KKIKTDSPYGPGGGMNL 464
           MA SVMASL+LKPSPF  + + VRG+P+L+R T  FK++ASG KKIKTD+PYG GGGMNL
Sbjct: 1   MAASVMASLSLKPSPFTVEKSSVRGLPTLSRRT--FKIEASGVKKIKTDTPYGTGGGMNL 58

Query: 463 RDGLDASGRKPKGKGVYQFADKYGANVDGYSPIYSPEEWAPTGDTYSGGTTGLLIWAVTX 284
           RDGLDASGRKPKGKGVYQ+ DKYGANVDGYSPIY+ +EW+PTGD Y+GG TGLLIWAVT 
Sbjct: 59  RDGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPTGDVYAGGKTGLLIWAVTL 118

Query: 283 XXXXXXXXXLVYNTSALAQ 227
                    LVY+TSALAQ
Sbjct: 119 AGILAGGALLVYSTSALAQ 137


>gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]
           gi|118488997|gb|ABK96306.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|118489823|gb|ABK96711.1| unknown
           [Populus trichocarpa x Populus deltoides]
          Length = 137

 Score =  197 bits (500), Expect = 3e-48
 Identities = 99/139 (71%), Positives = 115/139 (82%), Gaps = 1/139 (0%)
 Frame = -2

Query: 640 MATSVMASLNLKPSPFLEKSAVVRGVPSLARSTSSFKVQASG-KKIKTDSPYGPGGGMNL 464
           MA SVMASL+LKPSPF  + + VRG+P+L+R   SFK++ASG KKIKTD+PYG GGGMNL
Sbjct: 1   MAASVMASLSLKPSPFTVEKSSVRGLPTLSRR--SFKIEASGVKKIKTDTPYGTGGGMNL 58

Query: 463 RDGLDASGRKPKGKGVYQFADKYGANVDGYSPIYSPEEWAPTGDTYSGGTTGLLIWAVTX 284
           RDGLDASGRKPKGKGVYQ+ DKYGANVDGYSPIY+ +EW+P+GD Y+GG TGLLIWAVT 
Sbjct: 59  RDGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYAGGKTGLLIWAVTL 118

Query: 283 XXXXXXXXXLVYNTSALAQ 227
                    LVY+TSALAQ
Sbjct: 119 AGILAGGALLVYSTSALAQ 137