BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003502
         (1862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534324.1| arginine/serine-rich splicing factor, putati...   145   3e-32
gb|AFK40774.1| unknown [Lotus japonicus]                              141   7e-31
ref|XP_002264105.1| PREDICTED: serine/arginine-rich splicing fac...   140   9e-31
ref|XP_003532014.1| PREDICTED: serine/arginine-rich splicing fac...   140   2e-30
ref|XP_002325387.1| predicted protein [Populus trichocarpa] gi|2...   140   2e-30

>ref|XP_002534324.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223525498|gb|EEF28060.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 184

 Score =  145 bits (367), Expect = 3e-32
 Identities = 70/107 (65%), Positives = 73/107 (68%)
 Frame = +3

Query: 60  RVYVGNLDPRVSERELEDEFRAYGVLRSVWVARKPPGYAFVEFXXXXXXXXXXXXXXGKN 239
           RVYVGNLDPRVSER+LEDEFR YGVLRSVWVAR+PPGYAFVEF              GKN
Sbjct: 3   RVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDGKN 62

Query: 240 GWRVELSHNSKSXXXXXXXXXXXXXXXXXXDLKCYECGEPGHFAREC 380
           GWRVELSHNSK                   D+KCYECGEPGHFAREC
Sbjct: 63  GWRVELSHNSKGGGGRGGGSGGGGRGRGGEDMKCYECGEPGHFAREC 109


>gb|AFK40774.1| unknown [Lotus japonicus]
          Length = 181

 Score =  141 bits (355), Expect = 7e-31
 Identities = 70/107 (65%), Positives = 73/107 (68%)
 Frame = +3

Query: 60  RVYVGNLDPRVSERELEDEFRAYGVLRSVWVARKPPGYAFVEFXXXXXXXXXXXXXXGKN 239
           RVYVGNLDPRVSER+LEDEFR YGVLRSVWVAR+PPGYAF+EF              GKN
Sbjct: 3   RVYVGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFLEFDDKRDALDAIHALDGKN 62

Query: 240 GWRVELSHNSKSXXXXXXXXXXXXXXXXXXDLKCYECGEPGHFAREC 380
           GWRVELSHNSK                   DLKCYECGEPGHFAREC
Sbjct: 63  GWRVELSHNSKG----GGGGRGGGRGRGGEDLKCYECGEPGHFAREC 105


>ref|XP_002264105.1| PREDICTED: serine/arginine-rich splicing factor 7 [Vitis vinifera]
           gi|296086540|emb|CBI32129.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score =  140 bits (354), Expect = 9e-31
 Identities = 70/108 (64%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
 Frame = +3

Query: 60  RVYVGNLDPRVSERELEDEFRAYGVLRSVWVARKPPGYAFVEFXXXXXXXXXXXXXXGKN 239
           RVYVGNLDPRVSERELEDEFR YGV+RSVWVAR+PPGYAFVEF              GK+
Sbjct: 3   RVYVGNLDPRVSERELEDEFRVYGVIRSVWVARRPPGYAFVEFADRRDAVDAIRGLDGKS 62

Query: 240 GWRVELSHNSK-SXXXXXXXXXXXXXXXXXXDLKCYECGEPGHFAREC 380
           GWRVELSHNSK                    DLKCYECGEPGHFAREC
Sbjct: 63  GWRVELSHNSKGGGGGGGGGGGRDRGRGGGEDLKCYECGEPGHFAREC 110


>ref|XP_003532014.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine
           max]
          Length = 176

 Score =  140 bits (352), Expect = 2e-30
 Identities = 69/107 (64%), Positives = 72/107 (67%)
 Frame = +3

Query: 60  RVYVGNLDPRVSERELEDEFRAYGVLRSVWVARKPPGYAFVEFXXXXXXXXXXXXXXGKN 239
           RVYVGNLDPRVSER+LEDEFR YGVLRSVWVAR+PPGYAF+EF              GKN
Sbjct: 3   RVYVGNLDPRVSERDLEDEFRIYGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDGKN 62

Query: 240 GWRVELSHNSKSXXXXXXXXXXXXXXXXXXDLKCYECGEPGHFAREC 380
           GWRVELSHNSK                   D KCYECGEPGHFAREC
Sbjct: 63  GWRVELSHNSKG-------GGRGGRGRGGEDTKCYECGEPGHFAREC 102


>ref|XP_002325387.1| predicted protein [Populus trichocarpa] gi|222862262|gb|EEE99768.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  140 bits (352), Expect = 2e-30
 Identities = 70/107 (65%), Positives = 72/107 (67%)
 Frame = +3

Query: 60  RVYVGNLDPRVSERELEDEFRAYGVLRSVWVARKPPGYAFVEFXXXXXXXXXXXXXXGKN 239
           RVYVGNLDPRVSER+LEDEFR YGVLRSVWVAR+PPGYAFVEF              GKN
Sbjct: 3   RVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAIDAIRALDGKN 62

Query: 240 GWRVELSHNSKSXXXXXXXXXXXXXXXXXXDLKCYECGEPGHFAREC 380
           GWRVELSHNSK                   D KCYECGEPGHFAREC
Sbjct: 63  GWRVELSHNSKG---GGGRSGDGHGRGGGEDSKCYECGEPGHFAREC 106