BLASTX nr result

ID: Coptis21_contig00003494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003494
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313941.1| predicted protein [Populus trichocarpa] gi|2...    58   4e-11
ref|XP_002328951.1| predicted protein [Populus trichocarpa] gi|2...    56   7e-11
ref|XP_002325911.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-11
ref|XP_004138902.1| PREDICTED: uncharacterized protein LOC101220...    54   2e-10
ref|XP_003520857.1| PREDICTED: uncharacterized protein LOC100808...    54   1e-09

>ref|XP_002313941.1| predicted protein [Populus trichocarpa] gi|222850349|gb|EEE87896.1|
           predicted protein [Populus trichocarpa]
          Length = 589

 Score = 57.8 bits (138), Expect(2) = 4e-11
 Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = -2

Query: 423 SWRSELCPVMESVYCAKVDVARSFRVVRSNEVEFEVEDVI-VHCINVER*SCSCRYWQND 247
           SW S L P  E      ++ A +++V+RS+EVEFEV        +N+   SCSCR WQ  
Sbjct: 406 SWFSVLAPSAEKRMIEAINHASAYQVLRSDEVEFEVLSADRSDIVNIGTHSCSCRGWQLY 465

Query: 246 GFPCVYAVASIIS 208
           G PC +AVA+++S
Sbjct: 466 GIPCSHAVAALVS 478



 Score = 34.7 bits (78), Expect(2) = 4e-11
 Identities = 26/76 (34%), Positives = 34/76 (44%), Gaps = 15/76 (19%)
 Frame = -3

Query: 185 SFIDPAFAVXXXXXXXXXSIHPIAN-------IEMPMEIPEDCD----IMPPDVRRGPGR 39
           +F +  F V         +IHPI          E PM+  +D D    + PP  RR PGR
Sbjct: 485 AFTEKCFTVAGYREAYAETIHPIPERIEWRKMSEAPMDDDDDDDDAQVVRPPKFRRPPGR 544

Query: 38  PKKK----ED*KHRSK 3
           P+KK    ED  +R K
Sbjct: 545 PEKKRICVEDDLNREK 560


>ref|XP_002328951.1| predicted protein [Populus trichocarpa] gi|222839185|gb|EEE77536.1|
           predicted protein [Populus trichocarpa]
          Length = 594

 Score = 55.8 bits (133), Expect(2) = 7e-11
 Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
 Frame = -2

Query: 423 SWRSELCPVMESVYCAKVDVARSFRVVRSNEVEFEVEDVI-VHCINVER*SCSCRYWQND 247
           SW S L P  E      +  A  ++V+R+NEVEFE+      + +++    CSCR WQ +
Sbjct: 421 SWTSILVPSAEKRVLEAIADAPCYQVLRANEVEFEIVSTERTNIVDISSRVCSCRRWQLN 480

Query: 246 GFPCVYAVASIIS 208
           G PC +A A++IS
Sbjct: 481 GLPCAHAAAALIS 493



 Score = 35.8 bits (81), Expect(2) = 7e-11
 Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 9/61 (14%)
 Frame = -3

Query: 182 FIDPAFAVXXXXXXXXXSIHPIANIEMPMEIPE---------DCDIMPPDVRRGPGRPKK 30
           F +P F V          I+PI +     E+ E         D  I PP  RR PGRPKK
Sbjct: 501 FAEPCFTVASYRETYSEMINPIPDKSQWRELGEGTEGGVARVDISIRPPKTRRPPGRPKK 560

Query: 29  K 27
           K
Sbjct: 561 K 561


>ref|XP_002325911.1| predicted protein [Populus trichocarpa] gi|222862786|gb|EEF00293.1|
           predicted protein [Populus trichocarpa]
          Length = 594

 Score = 55.1 bits (131), Expect(2) = 8e-11
 Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
 Frame = -2

Query: 423 SWRSELCPVMESVYCAKVDVARSFRVVRSNEVEFEVEDVI-VHCINVER*SCSCRYWQND 247
           SW S L P  E      +  A  ++V+R+NEVEFE+      + +++    CSCR WQ  
Sbjct: 421 SWTSILVPSAEKRILEAIADAHCYQVLRANEVEFEIVSTERTNIVDIRSRVCSCRRWQLY 480

Query: 246 GFPCVYAVASIIS 208
           G PC +A A++IS
Sbjct: 481 GLPCAHAAAALIS 493



 Score = 36.2 bits (82), Expect(2) = 8e-11
 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 9/61 (14%)
 Frame = -3

Query: 182 FIDPAFAVXXXXXXXXXSIHPIANIEMPMEIPE---------DCDIMPPDVRRGPGRPKK 30
           F +P F V          I+PI +  +  E+ E         D  I PP  RR PGRPKK
Sbjct: 501 FAEPCFTVASYRETYSEMINPIPDKSLWRELGEGTEGGGAKVDITIRPPKTRRPPGRPKK 560

Query: 29  K 27
           K
Sbjct: 561 K 561


>ref|XP_004138902.1| PREDICTED: uncharacterized protein LOC101220272 [Cucumis sativus]
           gi|449506289|ref|XP_004162705.1| PREDICTED:
           uncharacterized protein LOC101228133 [Cucumis sativus]
          Length = 594

 Score = 54.3 bits (129), Expect(2) = 2e-10
 Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
 Frame = -2

Query: 420 WRSELCPVMESVYCAKVDVARSFRVVRSNEVEFEVEDVI-VHCINVER*SCSCRYWQNDG 244
           W S L P  E      +  AR ++V+R+NEVEFE+      + + +    CSCR WQ  G
Sbjct: 422 WTSILVPSAEKRIAEAIADARCYQVLRANEVEFEIVSTERTNIVEIHSRVCSCRRWQLYG 481

Query: 243 FPCVYAVASIIS 208
            PC +A A+++S
Sbjct: 482 LPCAHAAAALMS 493



 Score = 35.8 bits (81), Expect(2) = 2e-10
 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 9/61 (14%)
 Frame = -3

Query: 182 FIDPAFAVXXXXXXXXXSIHPIANIEMPMEIPE---------DCDIMPPDVRRGPGRPKK 30
           F +P F V          I+PI +  +  E  E         D  I PP +RR PGRPKK
Sbjct: 501 FAEPCFTVTSYRETYSQMIYPILDKSLWKEPGEGAEGGVAKVDITIRPPKIRRPPGRPKK 560

Query: 29  K 27
           K
Sbjct: 561 K 561


>ref|XP_003520857.1| PREDICTED: uncharacterized protein LOC100808214 [Glycine max]
          Length = 599

 Score = 54.3 bits (129), Expect(2) = 1e-09
 Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
 Frame = -2

Query: 420 WRSELCPVMESVYCAKVDVARSFRVVRSNEVEFEVEDVI-VHCINVER*SCSCRYWQNDG 244
           W S L P  E      +  A  ++V+R+NEVEFE+      + +++    CSCR WQ  G
Sbjct: 426 WTSILVPSAEKRILEAIADAHCYQVLRANEVEFEIVSTERTNIVDIRSRECSCRRWQLYG 485

Query: 243 FPCVYAVASIIS 208
            PC +A A++IS
Sbjct: 486 LPCAHAAAALIS 497



 Score = 33.1 bits (74), Expect(2) = 1e-09
 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 10/62 (16%)
 Frame = -3

Query: 182 FIDPAFAVXXXXXXXXXSIHPIANIEMPMEIPE----------DCDIMPPDVRRGPGRPK 33
           F +P F V          I+PI +     ++ E          D  I PP  RR PGRPK
Sbjct: 505 FAEPCFTVQSYRMTYSQMINPIPDKSQWRDLGEGAEGGGGARFDIIICPPKTRRPPGRPK 564

Query: 32  KK 27
           KK
Sbjct: 565 KK 566


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