BLASTX nr result

ID: Coptis21_contig00003485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003485
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277204.1| PREDICTED: uncharacterized protein LOC100243...    91   2e-16
ref|XP_003528134.1| PREDICTED: uncharacterized protein LOC100816...    88   1e-15
gb|AFK39419.1| unknown [Lotus japonicus]                               87   2e-15
ref|XP_003549823.1| PREDICTED: uncharacterized protein LOC100802...    87   2e-15
ref|XP_003522405.1| PREDICTED: uncharacterized protein LOC100813...    86   4e-15

>ref|XP_002277204.1| PREDICTED: uncharacterized protein LOC100243254 [Vitis vinifera]
          Length = 307

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 49/96 (51%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
 Frame = -3

Query: 594 KFRGNESIFVNKIRVEVYWDVHDWLFMPGLRNALIVFKXXXXXXXXXXXXXXXXXXXXSV 415
           KFRGNESI VNK+RVEVYWDVHDWLF PGLR+AL +FK                     +
Sbjct: 231 KFRGNESIHVNKLRVEVYWDVHDWLFSPGLRHALFIFK-------------------PLM 271

Query: 414 ITMPLSYQMD-----DSFPVEGSSGYCLFLYGWKVE 322
            + PLS Q       + F   GSS +CLFLY WKVE
Sbjct: 272 SSTPLSSQTGSCDAAEGFNAGGSSEFCLFLYAWKVE 307


>ref|XP_003528134.1| PREDICTED: uncharacterized protein LOC100816323 [Glycine max]
          Length = 302

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 46/91 (50%), Positives = 56/91 (61%)
 Frame = -3

Query: 594 KFRGNESIFVNKIRVEVYWDVHDWLFMPGLRNALIVFKXXXXXXXXXXXXXXXXXXXXSV 415
           KFRGNESI +NK+RVEVYWDVHDWLF PGL++AL +FK                      
Sbjct: 227 KFRGNESIHLNKMRVEVYWDVHDWLFSPGLKHALFIFKPVLSSSN--------------- 271

Query: 414 ITMPLSYQMDDSFPVEGSSGYCLFLYGWKVE 322
           I++  S+ +  S P E SS +CLFLY WKVE
Sbjct: 272 ISLSSSHSISSSSPPE-SSEFCLFLYAWKVE 301


>gb|AFK39419.1| unknown [Lotus japonicus]
          Length = 322

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 47/96 (48%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
 Frame = -3

Query: 594 KFRGNESIFVNKIRVEVYWDVHDWLFMPGLRNALIVFKXXXXXXXXXXXXXXXXXXXXSV 415
           KFRGNESI ++K+RVEVYWD HDWLF PGL++AL +FK                      
Sbjct: 231 KFRGNESIRLSKMRVEVYWDAHDWLFSPGLKHALFIFKPVLSSTSSLPSCSSPLSS---- 286

Query: 414 ITMPLSYQMDDS-----FPVEGSSGYCLFLYGWKVE 322
           ++ PLS Q   S     F V GSS +CLFLY WKVE
Sbjct: 287 VSSPLSAQTMSSESVEGFSVSGSSEFCLFLYAWKVE 322


>ref|XP_003549823.1| PREDICTED: uncharacterized protein LOC100802860 [Glycine max]
          Length = 331

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 49/98 (50%), Positives = 58/98 (59%), Gaps = 7/98 (7%)
 Frame = -3

Query: 594 KFRGNESIFVNKIRVEVYWDVHDWLFMPGLRNALIVFKXXXXXXXXXXXXXXXXXXXXSV 415
           KFRGNESI ++K+RVEVYWDVHDWLF PGL++AL +FK                    S 
Sbjct: 234 KFRGNESIHLSKMRVEVYWDVHDWLFSPGLKHALFIFKPILSSSTTTITSMSSSSPSLSS 293

Query: 414 ITMPLS--YQMDDS-----FPVEGSSGYCLFLYGWKVE 322
            + PLS  +Q   S     F V GSS +CLFLY WKVE
Sbjct: 294 SSPPLSTVHQTRSSGSVEGFSVGGSSEFCLFLYAWKVE 331


>ref|XP_003522405.1| PREDICTED: uncharacterized protein LOC100813254 [Glycine max]
          Length = 326

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 48/103 (46%), Positives = 59/103 (57%), Gaps = 12/103 (11%)
 Frame = -3

Query: 594 KFRGNESIFVNKIRVEVYWDVHDWLFMPGLRNALIVFKXXXXXXXXXXXXXXXXXXXXSV 415
           KFRGNESI +NK+RVEVYWDVHDWLF PGL++AL +FK                    S 
Sbjct: 224 KFRGNESIHLNKMRVEVYWDVHDWLFSPGLKHALFIFKPVLSSSNISMSSSHSISSSSSP 283

Query: 414 ITM-------PLSYQMDDSFPVEG-----SSGYCLFLYGWKVE 322
           +++       PLS Q   S  +EG     +S +CLFLY WKVE
Sbjct: 284 LSLSLSSSSTPLSTQTGRSGSLEGCSVSEASAFCLFLYAWKVE 326


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