BLASTX nr result
ID: Coptis21_contig00003482
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003482 (443 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004164657.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin... 55 3e-15 ref|XP_004146403.1| PREDICTED: E3 ubiquitin-protein ligase ORTHR... 55 3e-15 ref|XP_004157854.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin... 52 3e-14 ref|XP_004140396.1| PREDICTED: E3 ubiquitin-protein ligase ORTHR... 52 3e-14 gb|ADR79442.1| VARIANT IN METHYLATION-like protein [Liriodendron... 52 3e-14 >ref|XP_004164657.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucumis sativus] Length = 745 Score = 54.7 bits (130), Expect(2) = 3e-15 Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 9/55 (16%) Frame = -1 Query: 140 PCLVSPPETLVYTLQWDCPDCSLTDA---------TPTALESGDLILASIRAIEA 3 PCL +PPETL TLQWDCPDCSL +P + + ++A+IRAIEA Sbjct: 41 PCLSNPPETLESTLQWDCPDCSLPSQDALLPPPSNSPLPIHPSNDLIAAIRAIEA 95 Score = 51.6 bits (122), Expect(2) = 3e-15 Identities = 24/37 (64%), Positives = 24/37 (64%) Frame = -2 Query: 352 QLPCDIDGICMRCRKKASPEEESTTLITCKTCNTPWH 242 QLPCD DGICM C K S E ITCKTC TPWH Sbjct: 7 QLPCDGDGICMLCHSKPSDLE----TITCKTCVTPWH 39 >ref|XP_004146403.1| PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucumis sativus] Length = 608 Score = 54.7 bits (130), Expect(2) = 3e-15 Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 9/55 (16%) Frame = -1 Query: 140 PCLVSPPETLVYTLQWDCPDCSLTDA---------TPTALESGDLILASIRAIEA 3 PCL +PPETL TLQWDCPDCSL +P + + ++A+IRAIEA Sbjct: 41 PCLSNPPETLESTLQWDCPDCSLPSQDALLPPPSNSPLPIHPSNDLIAAIRAIEA 95 Score = 51.6 bits (122), Expect(2) = 3e-15 Identities = 24/37 (64%), Positives = 24/37 (64%) Frame = -2 Query: 352 QLPCDIDGICMRCRKKASPEEESTTLITCKTCNTPWH 242 QLPCD DGICM C K S E ITCKTC TPWH Sbjct: 7 QLPCDGDGICMLCHSKPSDLE----TITCKTCVTPWH 39 >ref|XP_004157854.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucumis sativus] Length = 688 Score = 52.4 bits (124), Expect(2) = 3e-14 Identities = 24/37 (64%), Positives = 25/37 (67%) Frame = -2 Query: 352 QLPCDIDGICMRCRKKASPEEESTTLITCKTCNTPWH 242 QLPCD DGICM C+ K S E ITCKTC TPWH Sbjct: 24 QLPCDGDGICMLCKAKPSDVE----TITCKTCVTPWH 56 Score = 50.8 bits (120), Expect(2) = 3e-14 Identities = 31/56 (55%), Positives = 33/56 (58%), Gaps = 11/56 (19%) Frame = -1 Query: 137 CLVSPPETLVYTLQWDCPDCSL-----------TDATPTALESGDLILASIRAIEA 3 CL SPPETL TLQWDCPDCS + PTA S DL+ SIRAIEA Sbjct: 59 CLSSPPETLASTLQWDCPDCSTPPEDVILPPPGNHSFPTA-PSSDLV-TSIRAIEA 112 >ref|XP_004140396.1| PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Cucumis sativus] Length = 667 Score = 52.4 bits (124), Expect(2) = 3e-14 Identities = 24/37 (64%), Positives = 25/37 (67%) Frame = -2 Query: 352 QLPCDIDGICMRCRKKASPEEESTTLITCKTCNTPWH 242 QLPCD DGICM C+ K S E ITCKTC TPWH Sbjct: 24 QLPCDGDGICMLCKAKPSDVE----TITCKTCVTPWH 56 Score = 50.8 bits (120), Expect(2) = 3e-14 Identities = 31/56 (55%), Positives = 33/56 (58%), Gaps = 11/56 (19%) Frame = -1 Query: 137 CLVSPPETLVYTLQWDCPDCSL-----------TDATPTALESGDLILASIRAIEA 3 CL SPPETL TLQWDCPDCS + PTA S DL+ SIRAIEA Sbjct: 59 CLSSPPETLASTLQWDCPDCSTPPEDVILPPPGNHSFPTA-PSSDLV-TSIRAIEA 112 >gb|ADR79442.1| VARIANT IN METHYLATION-like protein [Liriodendron tulipifera] Length = 713 Score = 52.0 bits (123), Expect(2) = 3e-14 Identities = 25/47 (53%), Positives = 29/47 (61%) Frame = -2 Query: 382 MAHNSQQLEQQLPCDIDGICMRCRKKASPEEESTTLITCKTCNTPWH 242 MAH+S LPCD DGICM C+K S EE+ + C TC TPWH Sbjct: 1 MAHDSD-----LPCDGDGICMLCKKSPSDEEK----LLCNTCATPWH 38 Score = 50.8 bits (120), Expect(2) = 3e-14 Identities = 25/52 (48%), Positives = 35/52 (67%), Gaps = 6/52 (11%) Frame = -1 Query: 140 PCLVSPPETLVYTLQWDCPDCS---LTDATPTALESGDL---ILASIRAIEA 3 PCL SPP++L TLQW+CPDCS D+ P +G L +++++RAIEA Sbjct: 40 PCLSSPPQSLSSTLQWNCPDCSPAPSVDSKPAPSVAGSLSNDLISAVRAIEA 91