BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003474
         (1249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [V...   695   0.0  
emb|CBI34473.3| unnamed protein product [Vitis vinifera]              695   0.0  
ref|XP_002515859.1| DNA primase, putative [Ricinus communis] gi|...   651   0.0  
ref|XP_003572504.1| PREDICTED: DNA primase small subunit-like [B...   643   0.0  
gb|EEC79056.1| hypothetical protein OsI_19620 [Oryza sativa Indi...   640   0.0  

>ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [Vitis vinifera]
          Length = 457

 Score =  695 bits (1793), Expect = 0.0
 Identities = 316/375 (84%), Positives = 350/375 (93%)
 Frame = +3

Query: 114  LPEGFNPSYLKLYYGKLFPHAEIFKWMSYGNDGKHPGCDQSYFGRREFSYTLENDIYIRF 293
            +P+GFN +YLK+YYGKLFPH+++FKWMSYGNDGKHP CDQSY GRREFS+TL +DIY+RF
Sbjct: 29   VPDGFNANYLKVYYGKLFPHSDLFKWMSYGNDGKHPACDQSYIGRREFSFTLADDIYLRF 88

Query: 294  QSFNSAAQLESSIKDKCPFKIDIGPVYSVDPAKRHAYAQGGDNVFTPVERELVFDIDMSD 473
            QSFNS  ++E+SIK+KCPFKIDIGPVYSVDP KRHAYAQ GDNVFTPVERELVFDID++D
Sbjct: 89   QSFNSVHEMENSIKEKCPFKIDIGPVYSVDPTKRHAYAQSGDNVFTPVERELVFDIDITD 148

Query: 474  YDDVRYCCSGADVCLECWPLITIAIKVIDTTLRDDFGFNHILWVYSGRRGVHCWVCDGRA 653
            YDDVRYCCSGADVCL+CWPL+T+AIKVIDT LRDDFGFNHILWVYSGRRGVHCWVCDGRA
Sbjct: 149  YDDVRYCCSGADVCLDCWPLMTVAIKVIDTALRDDFGFNHILWVYSGRRGVHCWVCDGRA 208

Query: 654  RRLSNEQRAAITEYFRVYKGNENSHKKVSLIGPALHPFLVRSYTEVLNSFFEEKLLPGQK 833
            RRLSNEQRAAI +YFRVYKGNENS KKVSL+GPALHPFL RSYTEVL  FFEEKLLPGQK
Sbjct: 209  RRLSNEQRAAIADYFRVYKGNENSQKKVSLVGPALHPFLARSYTEVLKDFFEEKLLPGQK 268

Query: 834  LLATEERFEKILQLIPDDAVTAELRGKWLENRRSSISREDVNVSRWQQLKHSLQSGKTKG 1013
            L +TEER+EKIL++IPD+++T+ELRGKW ENRRSSIS+ED+N  RW+QLKH LQSGK K 
Sbjct: 269  LFSTEERYEKILKIIPDESITSELRGKWQENRRSSISKEDINAIRWEQLKHMLQSGKQKA 328

Query: 1014 HGLRRCVEEIVFSYTYPRLDLEVSKHMNHLLKAPFCVHPKTGRVCVPIDPNECEEFDPTT 1193
             GLRRCVEEIVFSYTYPRLD+EVSKHMNHLLKAPFCVHPKTGRVCVPIDP  CEEFDPT+
Sbjct: 329  QGLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPKSCEEFDPTS 388

Query: 1194 VPTLSTLLEELNMGG 1238
            VPTLS LLEELNMGG
Sbjct: 389  VPTLSKLLEELNMGG 403


>emb|CBI34473.3| unnamed protein product [Vitis vinifera]
          Length = 447

 Score =  695 bits (1793), Expect = 0.0
 Identities = 316/375 (84%), Positives = 350/375 (93%)
 Frame = +3

Query: 114  LPEGFNPSYLKLYYGKLFPHAEIFKWMSYGNDGKHPGCDQSYFGRREFSYTLENDIYIRF 293
            +P+GFN +YLK+YYGKLFPH+++FKWMSYGNDGKHP CDQSY GRREFS+TL +DIY+RF
Sbjct: 19   VPDGFNANYLKVYYGKLFPHSDLFKWMSYGNDGKHPACDQSYIGRREFSFTLADDIYLRF 78

Query: 294  QSFNSAAQLESSIKDKCPFKIDIGPVYSVDPAKRHAYAQGGDNVFTPVERELVFDIDMSD 473
            QSFNS  ++E+SIK+KCPFKIDIGPVYSVDP KRHAYAQ GDNVFTPVERELVFDID++D
Sbjct: 79   QSFNSVHEMENSIKEKCPFKIDIGPVYSVDPTKRHAYAQSGDNVFTPVERELVFDIDITD 138

Query: 474  YDDVRYCCSGADVCLECWPLITIAIKVIDTTLRDDFGFNHILWVYSGRRGVHCWVCDGRA 653
            YDDVRYCCSGADVCL+CWPL+T+AIKVIDT LRDDFGFNHILWVYSGRRGVHCWVCDGRA
Sbjct: 139  YDDVRYCCSGADVCLDCWPLMTVAIKVIDTALRDDFGFNHILWVYSGRRGVHCWVCDGRA 198

Query: 654  RRLSNEQRAAITEYFRVYKGNENSHKKVSLIGPALHPFLVRSYTEVLNSFFEEKLLPGQK 833
            RRLSNEQRAAI +YFRVYKGNENS KKVSL+GPALHPFL RSYTEVL  FFEEKLLPGQK
Sbjct: 199  RRLSNEQRAAIADYFRVYKGNENSQKKVSLVGPALHPFLARSYTEVLKDFFEEKLLPGQK 258

Query: 834  LLATEERFEKILQLIPDDAVTAELRGKWLENRRSSISREDVNVSRWQQLKHSLQSGKTKG 1013
            L +TEER+EKIL++IPD+++T+ELRGKW ENRRSSIS+ED+N  RW+QLKH LQSGK K 
Sbjct: 259  LFSTEERYEKILKIIPDESITSELRGKWQENRRSSISKEDINAIRWEQLKHMLQSGKQKA 318

Query: 1014 HGLRRCVEEIVFSYTYPRLDLEVSKHMNHLLKAPFCVHPKTGRVCVPIDPNECEEFDPTT 1193
             GLRRCVEEIVFSYTYPRLD+EVSKHMNHLLKAPFCVHPKTGRVCVPIDP  CEEFDPT+
Sbjct: 319  QGLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPKSCEEFDPTS 378

Query: 1194 VPTLSTLLEELNMGG 1238
            VPTLS LLEELNMGG
Sbjct: 379  VPTLSKLLEELNMGG 393


>ref|XP_002515859.1| DNA primase, putative [Ricinus communis] gi|223545014|gb|EEF46528.1|
            DNA primase, putative [Ricinus communis]
          Length = 515

 Score =  651 bits (1680), Expect = 0.0
 Identities = 301/393 (76%), Positives = 348/393 (88%)
 Frame = +3

Query: 60   NKGGDNMDVDTNLNQRVLLPEGFNPSYLKLYYGKLFPHAEIFKWMSYGNDGKHPGCDQSY 239
            + G D+M +D N      +   FNP+YLKLYYGKLFPHAEIFKWM YGNDGKHP CD+SY
Sbjct: 5    DNGRDDMLIDANA-----VSNEFNPNYLKLYYGKLFPHAEIFKWMCYGNDGKHPACDKSY 59

Query: 240  FGRREFSYTLENDIYIRFQSFNSAAQLESSIKDKCPFKIDIGPVYSVDPAKRHAYAQGGD 419
            FGRREFS+TL+NDIY+RFQSFN+ +QL++SIKDKCPFKIDIGPVY+VDPAKRHAY+Q GD
Sbjct: 60   FGRREFSFTLDNDIYLRFQSFNNESQLKTSIKDKCPFKIDIGPVYTVDPAKRHAYSQSGD 119

Query: 420  NVFTPVERELVFDIDMSDYDDVRYCCSGADVCLECWPLITIAIKVIDTTLRDDFGFNHIL 599
            NVFTPVEREL+FDIDMSDYD+VRYCCSGADVCL+CWPL+TIAIKVI++ LRDDFGFNHIL
Sbjct: 120  NVFTPVERELIFDIDMSDYDNVRYCCSGADVCLDCWPLMTIAIKVINSALRDDFGFNHIL 179

Query: 600  WVYSGRRGVHCWVCDGRARRLSNEQRAAITEYFRVYKGNENSHKKVSLIGPALHPFLVRS 779
            WVYSGRRGVHCWVCDG+ARRL+NEQRAAI +Y RVYKGNENS+K VSL GP LHPFLVRS
Sbjct: 180  WVYSGRRGVHCWVCDGKARRLTNEQRAAIVDYLRVYKGNENSNKMVSLTGP-LHPFLVRS 238

Query: 780  YTEVLNSFFEEKLLPGQKLLATEERFEKILQLIPDDAVTAELRGKWLENRRSSISREDVN 959
            Y EVL  FFE KLL  Q++ +TEER+EKIL++IPD++VT+ELRGKW   +++S S+E VN
Sbjct: 239  YAEVLKDFFETKLLSSQEIFSTEERYEKILEMIPDESVTSELRGKWQNTKQTSSSKEGVN 298

Query: 960  VSRWQQLKHSLQSGKTKGHGLRRCVEEIVFSYTYPRLDLEVSKHMNHLLKAPFCVHPKTG 1139
            + RW+QLK +LQSG  K  GLR+CVEEIVFS+TYPRLD+EVSKHMNHLLKAPFC+HPKTG
Sbjct: 299  LVRWEQLKRTLQSGTKKAPGLRKCVEEIVFSFTYPRLDVEVSKHMNHLLKAPFCIHPKTG 358

Query: 1140 RVCVPIDPNECEEFDPTTVPTLSTLLEELNMGG 1238
            RVCVPIDP  C+EFDPT VPTLS LL+ELNMGG
Sbjct: 359  RVCVPIDPKHCDEFDPTAVPTLSQLLKELNMGG 391


>ref|XP_003572504.1| PREDICTED: DNA primase small subunit-like [Brachypodium distachyon]
          Length = 450

 Score =  643 bits (1658), Expect = 0.0
 Identities = 295/391 (75%), Positives = 339/391 (86%), Gaps = 3/391 (0%)
 Frame = +3

Query: 78   MDVDTNLNQRVL---LPEGFNPSYLKLYYGKLFPHAEIFKWMSYGNDGKHPGCDQSYFGR 248
            M++D    QR +   +PEGFN  YL++YYGKLFP+ + FKW+SYGND KHPGCDQSY GR
Sbjct: 7    MEIDGQQQQREVAAAVPEGFNADYLRIYYGKLFPYGDFFKWLSYGNDAKHPGCDQSYIGR 66

Query: 249  REFSYTLENDIYIRFQSFNSAAQLESSIKDKCPFKIDIGPVYSVDPAKRHAYAQGGDNVF 428
            RE S+TLENDIY+RFQSF+SAA+LESSIK+KCPFKIDIGPVYSVDPAKRHAYAQ G+NVF
Sbjct: 67   RELSFTLENDIYLRFQSFDSAAELESSIKEKCPFKIDIGPVYSVDPAKRHAYAQSGNNVF 126

Query: 429  TPVERELVFDIDMSDYDDVRYCCSGADVCLECWPLITIAIKVIDTTLRDDFGFNHILWVY 608
             PVEREL+FDID+SDYDDVRYCCSGAD C++CWPL+TI IK++DT+LR DFGFNHILWVY
Sbjct: 127  APVERELIFDIDISDYDDVRYCCSGADTCVDCWPLMTIVIKILDTSLRGDFGFNHILWVY 186

Query: 609  SGRRGVHCWVCDGRARRLSNEQRAAITEYFRVYKGNENSHKKVSLIGPALHPFLVRSYTE 788
            SGRRGVHCWVCD RAR+LSNEQR+AI +YFRVYKG EN+ KKVSL GP LHPFL RSYT+
Sbjct: 187  SGRRGVHCWVCDSRARKLSNEQRSAIADYFRVYKGGENTSKKVSLTGPVLHPFLARSYTD 246

Query: 789  VLNSFFEEKLLPGQKLLATEERFEKILQLIPDDAVTAELRGKWLENRRSSISREDVNVSR 968
            VL  FFE+KLL  Q+L ++EER  KIL+LIPD+ V +EL  KW  NRRSSIS+EDVN +R
Sbjct: 247  VLKCFFEDKLLHSQQLFSSEERCNKILELIPDENVASELHDKWQGNRRSSISKEDVNAAR 306

Query: 969  WQQLKHSLQSGKTKGHGLRRCVEEIVFSYTYPRLDLEVSKHMNHLLKAPFCVHPKTGRVC 1148
            W+QLK +LQSGK K  GLRRCVEEIVFSYTYPRLD+EVSKHMNHLLKAPFC+HPKTGRVC
Sbjct: 307  WEQLKTTLQSGKHKAQGLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCIHPKTGRVC 366

Query: 1149 VPIDPNECEEFDPTTVPTLSTLLEELNMGGL 1241
            VPIDPN C++FDP  VPTLS LL ELN  G+
Sbjct: 367  VPIDPNNCDDFDPAAVPTLSQLLGELNAAGM 397


>gb|EEC79056.1| hypothetical protein OsI_19620 [Oryza sativa Indica Group]
            gi|222631272|gb|EEE63404.1| hypothetical protein
            OsJ_18216 [Oryza sativa Japonica Group]
          Length = 449

 Score =  640 bits (1650), Expect = 0.0
 Identities = 293/394 (74%), Positives = 342/394 (86%), Gaps = 2/394 (0%)
 Frame = +3

Query: 72   DNMDVDTNLNQ--RVLLPEGFNPSYLKLYYGKLFPHAEIFKWMSYGNDGKHPGCDQSYFG 245
            D M++D    Q     +P+GFN  YL++YYGKLFPH + FKW+SYGNDGKHPGCDQSY G
Sbjct: 9    DAMEIDGQHQQVANTAVPDGFNADYLRIYYGKLFPHVDFFKWLSYGNDGKHPGCDQSYVG 68

Query: 246  RREFSYTLENDIYIRFQSFNSAAQLESSIKDKCPFKIDIGPVYSVDPAKRHAYAQGGDNV 425
            RREFS+TLENDIY+RFQSF+S A++E+SIK+KCPFKIDIGPVYSVDPAKRHAYAQ G+NV
Sbjct: 69   RREFSFTLENDIYVRFQSFDSVAEMENSIKEKCPFKIDIGPVYSVDPAKRHAYAQSGNNV 128

Query: 426  FTPVERELVFDIDMSDYDDVRYCCSGADVCLECWPLITIAIKVIDTTLRDDFGFNHILWV 605
            F PVEREL+FDID+SDYDDVRYCCSGADVC+ECWPL+TIAIK++D +LRDDFGFNHILWV
Sbjct: 129  FVPVERELIFDIDISDYDDVRYCCSGADVCMECWPLMTIAIKILDASLRDDFGFNHILWV 188

Query: 606  YSGRRGVHCWVCDGRARRLSNEQRAAITEYFRVYKGNENSHKKVSLIGPALHPFLVRSYT 785
            YSGRRGVHCWVCD RAR+L+NEQRAAI +YFRVYKG EN+ KKVSL G  LHPFL RSYT
Sbjct: 189  YSGRRGVHCWVCDSRARKLNNEQRAAIADYFRVYKGGENTMKKVSLTGAVLHPFLARSYT 248

Query: 786  EVLNSFFEEKLLPGQKLLATEERFEKILQLIPDDAVTAELRGKWLENRRSSISREDVNVS 965
            +VL  FFE+KLL  Q+L A+EER++KIL LIPD+ V +EL  KW  NRRSSIS+EDVN +
Sbjct: 249  DVLKGFFEDKLLLSQQLFASEERYQKILDLIPDENVASELHDKWQGNRRSSISKEDVNAT 308

Query: 966  RWQQLKHSLQSGKTKGHGLRRCVEEIVFSYTYPRLDLEVSKHMNHLLKAPFCVHPKTGRV 1145
            RW+QLK +LQSGK K  GLRRC+EEIVFSYTYPRLD+EVSKHMNHLLKAPFC+HPKTGRV
Sbjct: 309  RWEQLKSTLQSGKHK--GLRRCIEEIVFSYTYPRLDMEVSKHMNHLLKAPFCIHPKTGRV 366

Query: 1146 CVPIDPNECEEFDPTTVPTLSTLLEELNMGGLSE 1247
            CVPIDPN C++FDPTTVPTLS + + +    ++E
Sbjct: 367  CVPIDPNNCDDFDPTTVPTLSQVFQGIVSATIAE 400