BLASTX nr result

ID: Coptis21_contig00003472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003472
         (1920 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281042.1| PREDICTED: GTPase HflX-like [Vitis vinifera]      750   0.0  
emb|CBI19757.3| unnamed protein product [Vitis vinifera]              745   0.0  
ref|XP_003589327.1| GTP-binding protein hflX [Medicago truncatul...   731   0.0  
ref|XP_002510444.1| GTP-binding protein hflx, putative [Ricinus ...   725   0.0  
ref|XP_004154856.1| PREDICTED: GTPase HflX-like [Cucumis sativus]     724   0.0  

>ref|XP_002281042.1| PREDICTED: GTPase HflX-like [Vitis vinifera]
          Length = 547

 Score =  750 bits (1936), Expect = 0.0
 Identities = 395/499 (79%), Positives = 434/499 (86%), Gaps = 2/499 (0%)
 Frame = -2

Query: 1652 VQVFSEDVVESSAELVSLPENQQLVQSESSGS--SNGALEKFTEKENFFPTRPKSKVQVR 1479
            V+V    V   S + +SLPE    V+ E   +     A  K  EK    PTR K K    
Sbjct: 52   VRVLQRGVGLVSPDDLSLPEPVIDVKEEEVFAVVDGVAGTKAEEKTLKAPTRVKKK---G 108

Query: 1478 KDEEEEERRFILRNGREVFAEKCYLVAVERKSEQDVFFGIEESIKELAQLADTAGLMVVG 1299
             + E ++ RF LRNGREVF EK YLVAVE K + +  FGIEES+KELAQLADTAGLMVVG
Sbjct: 109  GEGESDDNRFKLRNGREVFEEKAYLVAVELKGDMEYSFGIEESLKELAQLADTAGLMVVG 168

Query: 1298 STSQKLVAPNPRTYIGSGKVSEIKNAIHALDVETVIFDDELSAGQLRNLEKAFGGEIRVC 1119
            STSQKL  PN RTYIGSGKV+EIK+AIHALDVETVIFDDELSAGQLRNLEKAFGG++RVC
Sbjct: 169  STSQKLSTPNRRTYIGSGKVAEIKSAIHALDVETVIFDDELSAGQLRNLEKAFGGDVRVC 228

Query: 1118 DRTALILDIFNQRAATHEAALQVALAQMEYQLPRLTKMWTHLERQAGGQVKGMGEKQIEV 939
            DRTALILDIFNQRAATHEAALQVALAQMEYQLPRLTKMWTHLERQAGG+VKGMGEKQIEV
Sbjct: 229  DRTALILDIFNQRAATHEAALQVALAQMEYQLPRLTKMWTHLERQAGGKVKGMGEKQIEV 288

Query: 938  DKRILRTQIGVLKKELESVRKHRRQYRNRRVSVPIPVVSLVGYTNAGKSTLLNRLTGANV 759
            DKRILRTQIG LKKELESVR+HR+QYRNRR SVP+PVVSLVGYTNAGKSTLLNRLTG+NV
Sbjct: 289  DKRILRTQIGALKKELESVRQHRKQYRNRRFSVPVPVVSLVGYTNAGKSTLLNRLTGSNV 348

Query: 758  LAEDRLFATLDPTTRRVQMKNGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVH 579
            LAEDRLFATLDPTTRRVQMKNG+EFLLTDTVGFIQKLPT LVAAFRATLEEISESSLLVH
Sbjct: 349  LAEDRLFATLDPTTRRVQMKNGREFLLTDTVGFIQKLPTMLVAAFRATLEEISESSLLVH 408

Query: 578  VVDISHPLSQQQIDAVDKVLSELDVAAIPQLIVWNKVDKASDPDKLKIKANEREDVICVS 399
            VVDISHPL++QQIDAVDKVLSELDV +IP+L+VWNKVDKAS+P K+K++A +REDV+C+S
Sbjct: 409  VVDISHPLAEQQIDAVDKVLSELDVLSIPRLMVWNKVDKASNPQKIKLEAEKREDVVCIS 468

Query: 398  ALTGDGLQDFCDAVQARLKDSMVWVEALVPFDKGELLNTIHQVGVVERTEYTEKGTLVRA 219
            AL GDGL +FC+AVQ +LKDSMVWVEALVPFDKGELL+TIHQVG+VERTEYTE GTLV+A
Sbjct: 469  ALNGDGLNEFCNAVQEKLKDSMVWVEALVPFDKGELLSTIHQVGMVERTEYTENGTLVKA 528

Query: 218  HVPLPLARQLTPMRQLCAS 162
            HVPL  AR LTPMRQLC S
Sbjct: 529  HVPLRFARLLTPMRQLCKS 547


>emb|CBI19757.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score =  745 bits (1923), Expect = 0.0
 Identities = 395/501 (78%), Positives = 434/501 (86%), Gaps = 4/501 (0%)
 Frame = -2

Query: 1652 VQVFSEDVVESSAELVSLPENQQLVQSESSGS--SNGALEKFTEKENFFPTRPKSKVQVR 1479
            V+V    V   S + +SLPE    V+ E   +     A  K  EK    PTR K K    
Sbjct: 64   VRVLQRGVGLVSPDDLSLPEPVIDVKEEEVFAVVDGVAGTKAEEKTLKAPTRVKKK---G 120

Query: 1478 KDEEEEERRFILRNGREVFAEKCYLVAVERKSEQDVFFGIEESIKELAQLADTAGLMVVG 1299
             + E ++ RF LRNGREVF EK YLVAVE K + +  FGIEES+KELAQLADTAGLMVVG
Sbjct: 121  GEGESDDNRFKLRNGREVFEEKAYLVAVELKGDMEYSFGIEESLKELAQLADTAGLMVVG 180

Query: 1298 STSQKLVAPNPRTYIGSGKVSEIKNAIHALDVETVIFDDELSAGQLRNLEKAFGGEIRVC 1119
            STSQKL  PN RTYIGSGKV+EIK+AIHALDVETVIFDDELSAGQLRNLEKAFGG++RVC
Sbjct: 181  STSQKLSTPNRRTYIGSGKVAEIKSAIHALDVETVIFDDELSAGQLRNLEKAFGGDVRVC 240

Query: 1118 DRTALILDIFNQRAATHEAALQ--VALAQMEYQLPRLTKMWTHLERQAGGQVKGMGEKQI 945
            DRTALILDIFNQRAATHEAALQ  VALAQMEYQLPRLTKMWTHLERQAGG+VKGMGEKQI
Sbjct: 241  DRTALILDIFNQRAATHEAALQANVALAQMEYQLPRLTKMWTHLERQAGGKVKGMGEKQI 300

Query: 944  EVDKRILRTQIGVLKKELESVRKHRRQYRNRRVSVPIPVVSLVGYTNAGKSTLLNRLTGA 765
            EVDKRILRTQIG LKKELESVR+HR+QYRNRR SVP+PVVSLVGYTNAGKSTLLNRLTG+
Sbjct: 301  EVDKRILRTQIGALKKELESVRQHRKQYRNRRFSVPVPVVSLVGYTNAGKSTLLNRLTGS 360

Query: 764  NVLAEDRLFATLDPTTRRVQMKNGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLL 585
            NVLAEDRLFATLDPTTRRVQMKNG+EFLLTDTVGFIQKLPT LVAAFRATLEEISESSLL
Sbjct: 361  NVLAEDRLFATLDPTTRRVQMKNGREFLLTDTVGFIQKLPTMLVAAFRATLEEISESSLL 420

Query: 584  VHVVDISHPLSQQQIDAVDKVLSELDVAAIPQLIVWNKVDKASDPDKLKIKANEREDVIC 405
            VHVVDISHPL++QQIDAVDKVLSELDV +IP+L+VWNKVDKAS+P K+K++A +REDV+C
Sbjct: 421  VHVVDISHPLAEQQIDAVDKVLSELDVLSIPRLMVWNKVDKASNPQKIKLEAEKREDVVC 480

Query: 404  VSALTGDGLQDFCDAVQARLKDSMVWVEALVPFDKGELLNTIHQVGVVERTEYTEKGTLV 225
            +SAL GDGL +FC+AVQ +LKDSMVWVEALVPFDKGELL+TIHQVG+VERTEYTE GTLV
Sbjct: 481  ISALNGDGLNEFCNAVQEKLKDSMVWVEALVPFDKGELLSTIHQVGMVERTEYTENGTLV 540

Query: 224  RAHVPLPLARQLTPMRQLCAS 162
            +AHVPL  AR LTPMRQLC S
Sbjct: 541  KAHVPLRFARLLTPMRQLCKS 561


>ref|XP_003589327.1| GTP-binding protein hflX [Medicago truncatula]
            gi|358348476|ref|XP_003638272.1| GTP-binding protein hflX
            [Medicago truncatula] gi|355478375|gb|AES59578.1|
            GTP-binding protein hflX [Medicago truncatula]
            gi|355504207|gb|AES85410.1| GTP-binding protein hflX
            [Medicago truncatula]
          Length = 545

 Score =  731 bits (1886), Expect = 0.0
 Identities = 374/503 (74%), Positives = 433/503 (86%), Gaps = 14/503 (2%)
 Frame = -2

Query: 1622 SSAELVSLPENQQLVQSESSGSSNGALEKFTEKENF-----FPTRPKSKVQVRKDEEEE- 1461
            SS  L   P N + +Q  SS S++  L    E+E        P   KS  +++K ++++ 
Sbjct: 43   SSFSLNVTPHNTEQLQLSSSFSNDAVLLPIQEQEQQQSSPPTPDEDKSTTKLKKKKKDKN 102

Query: 1460 --------ERRFILRNGREVFAEKCYLVAVERKSEQDVFFGIEESIKELAQLADTAGLMV 1305
                    + RF LRNGREVF EK YLV VERK E    FGIE+S+ EL QLADTAGL+V
Sbjct: 103  DDDNSSNIDNRFKLRNGREVFEEKAYLVGVERKGEVSDSFGIEDSLSELEQLADTAGLLV 162

Query: 1304 VGSTSQKLVAPNPRTYIGSGKVSEIKNAIHALDVETVIFDDELSAGQLRNLEKAFGGEIR 1125
            V ST QKL +PNPRTYIGSGKVSEIK+AI+ALDVETVIFDDELSAGQLRNLEK FGG++R
Sbjct: 163  VASTYQKLASPNPRTYIGSGKVSEIKSAINALDVETVIFDDELSAGQLRNLEKVFGGDVR 222

Query: 1124 VCDRTALILDIFNQRAATHEAALQVALAQMEYQLPRLTKMWTHLERQAGGQVKGMGEKQI 945
            VCDRTALILDIFNQRAATHEA+LQVALAQMEYQLPRLTKMWTHLERQ+GGQVKGMGEKQI
Sbjct: 223  VCDRTALILDIFNQRAATHEASLQVALAQMEYQLPRLTKMWTHLERQSGGQVKGMGEKQI 282

Query: 944  EVDKRILRTQIGVLKKELESVRKHRRQYRNRRVSVPIPVVSLVGYTNAGKSTLLNRLTGA 765
            EVDKRILR QIGVLKKELESVRKHR+QYRNRR+SVP+PVVSLVGYTNAGKSTLLN+LTGA
Sbjct: 283  EVDKRILRNQIGVLKKELESVRKHRKQYRNRRLSVPVPVVSLVGYTNAGKSTLLNQLTGA 342

Query: 764  NVLAEDRLFATLDPTTRRVQMKNGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLL 585
            +VLAED+LFATLDPTTRRVQMKNGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLL
Sbjct: 343  DVLAEDKLFATLDPTTRRVQMKNGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLL 402

Query: 584  VHVVDISHPLSQQQIDAVDKVLSELDVAAIPQLIVWNKVDKASDPDKLKIKANEREDVIC 405
            VHV+DISHPL+ QQI+AVDKVLSELDV++IP L+VWNK+D+ASDP K++++A +R+DV+C
Sbjct: 403  VHVIDISHPLADQQINAVDKVLSELDVSSIPTLMVWNKIDRASDPQKIRLEAGKRDDVVC 462

Query: 404  VSALTGDGLQDFCDAVQARLKDSMVWVEALVPFDKGELLNTIHQVGVVERTEYTEKGTLV 225
            +SAL+GDG+Q+FC+AVQ +LKDSMVWVEAL+PF+ G+LL+TIHQVG+VE+TEYTE+GT +
Sbjct: 463  ISALSGDGIQEFCNAVQDKLKDSMVWVEALLPFENGDLLSTIHQVGMVEKTEYTEQGTYI 522

Query: 224  RAHVPLPLARQLTPMRQLCAS*P 156
            +AHVPL  AR LTPMRQLC   P
Sbjct: 523  KAHVPLRFARLLTPMRQLCVPRP 545


>ref|XP_002510444.1| GTP-binding protein hflx, putative [Ricinus communis]
            gi|223551145|gb|EEF52631.1| GTP-binding protein hflx,
            putative [Ricinus communis]
          Length = 541

 Score =  725 bits (1871), Expect = 0.0
 Identities = 376/488 (77%), Positives = 425/488 (87%), Gaps = 5/488 (1%)
 Frame = -2

Query: 1616 AELVSLPENQQLVQS----ESSGSSNGALEKFTEKENFFPTRPKSKVQVRK-DEEEEERR 1452
            A  ++ P   QL+ +    E  G  NG     +E +   P    +K + +K D +  E R
Sbjct: 55   ASPINAPFPGQLIYNNEVEEVHGPVNGVAGPASEDK---PAVSSTKFRKKKQDGDSLEDR 111

Query: 1451 FILRNGREVFAEKCYLVAVERKSEQDVFFGIEESIKELAQLADTAGLMVVGSTSQKLVAP 1272
            F LRNGREV+ EK YLV VERK +    FGIEES+KELAQLADTAGL VVGST QKL +P
Sbjct: 112  FKLRNGREVYEEKGYLVGVERKGDTLDSFGIEESLKELAQLADTAGLTVVGSTYQKLTSP 171

Query: 1271 NPRTYIGSGKVSEIKNAIHALDVETVIFDDELSAGQLRNLEKAFGGEIRVCDRTALILDI 1092
            NPRTYIGSGKV+EIK+AIHALD+ETVIFDDELS GQLRNLEK FGG++RVCDRTALILDI
Sbjct: 172  NPRTYIGSGKVAEIKSAIHALDIETVIFDDELSPGQLRNLEKIFGGDVRVCDRTALILDI 231

Query: 1091 FNQRAATHEAALQVALAQMEYQLPRLTKMWTHLERQAGGQVKGMGEKQIEVDKRILRTQI 912
            FNQRAATHEA+LQVALAQMEYQLPRLT+MWTHLERQAGG+VKGMGEKQIEVDKRILRTQI
Sbjct: 232  FNQRAATHEASLQVALAQMEYQLPRLTRMWTHLERQAGGKVKGMGEKQIEVDKRILRTQI 291

Query: 911  GVLKKELESVRKHRRQYRNRRVSVPIPVVSLVGYTNAGKSTLLNRLTGANVLAEDRLFAT 732
            GVLKKELESVR HR+QYRNRR SVP+PVVSLVGYTNAGKSTLLN+LTGANVLAEDRLFAT
Sbjct: 292  GVLKKELESVRNHRKQYRNRRTSVPVPVVSLVGYTNAGKSTLLNQLTGANVLAEDRLFAT 351

Query: 731  LDPTTRRVQMKNGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLS 552
            LDPTTRRVQMKNG EFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPL+
Sbjct: 352  LDPTTRRVQMKNGNEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVVDISHPLA 411

Query: 551  QQQIDAVDKVLSELDVAAIPQLIVWNKVDKASDPDKLKIKANEREDVICVSALTGDGLQD 372
            +QQIDAVD+VLSELDVA+I +L+VWNKVD+ S+P ++K++A +R+DV+C+SAL GDGLQ+
Sbjct: 412  EQQIDAVDRVLSELDVASISKLMVWNKVDRVSNPSEIKLEAEKRQDVVCISALGGDGLQE 471

Query: 371  FCDAVQARLKDSMVWVEALVPFDKGELLNTIHQVGVVERTEYTEKGTLVRAHVPLPLARQ 192
            FC AVQ +LKDSMVWVEALVPF+KG+LL+TIHQVG+VERTEYTE GTL++AHVPL  AR 
Sbjct: 472  FCIAVQEKLKDSMVWVEALVPFEKGDLLSTIHQVGMVERTEYTENGTLIKAHVPLRFARL 531

Query: 191  LTPMRQLC 168
            LTPMRQLC
Sbjct: 532  LTPMRQLC 539


>ref|XP_004154856.1| PREDICTED: GTPase HflX-like [Cucumis sativus]
          Length = 548

 Score =  724 bits (1870), Expect = 0.0
 Identities = 365/454 (80%), Positives = 412/454 (90%)
 Frame = -2

Query: 1529 EKENFFPTRPKSKVQVRKDEEEEERRFILRNGREVFAEKCYLVAVERKSEQDVFFGIEES 1350
            E ++  P+R K K Q  +D +  E RF LRNGREVF EK YLV VERK +    F I+ES
Sbjct: 95   EPKSQLPSRVKKKTQ--EDGDSIEGRFKLRNGREVFEEKAYLVGVERKGDVAQLFSIDES 152

Query: 1349 IKELAQLADTAGLMVVGSTSQKLVAPNPRTYIGSGKVSEIKNAIHALDVETVIFDDELSA 1170
            +KELAQLADTAGL VVGST QKL +PNPRTYIGSGKV+EIK+AIHAL +ETVIFDDELSA
Sbjct: 153  LKELAQLADTAGLKVVGSTYQKLASPNPRTYIGSGKVAEIKSAIHALGIETVIFDDELSA 212

Query: 1169 GQLRNLEKAFGGEIRVCDRTALILDIFNQRAATHEAALQVALAQMEYQLPRLTKMWTHLE 990
            GQLRNLEK+FGG++RVCDRTALILDIFNQRAATHEA+LQVALAQMEYQLPRLTKMWTHLE
Sbjct: 213  GQLRNLEKSFGGDVRVCDRTALILDIFNQRAATHEASLQVALAQMEYQLPRLTKMWTHLE 272

Query: 989  RQAGGQVKGMGEKQIEVDKRILRTQIGVLKKELESVRKHRRQYRNRRVSVPIPVVSLVGY 810
            RQAGGQVKGMGEKQIEVDKRILRTQIGVL+KELESVR HR+QYR+RR SVP+PVVSLVGY
Sbjct: 273  RQAGGQVKGMGEKQIEVDKRILRTQIGVLRKELESVRVHRKQYRSRRFSVPVPVVSLVGY 332

Query: 809  TNAGKSTLLNRLTGANVLAEDRLFATLDPTTRRVQMKNGKEFLLTDTVGFIQKLPTTLVA 630
            TNAGKSTLLN LTGA VLAEDRLFATLDPTTRRVQMKNG EFLLTDTVGFIQKLPT LVA
Sbjct: 333  TNAGKSTLLNHLTGAEVLAEDRLFATLDPTTRRVQMKNGNEFLLTDTVGFIQKLPTMLVA 392

Query: 629  AFRATLEEISESSLLVHVVDISHPLSQQQIDAVDKVLSELDVAAIPQLIVWNKVDKASDP 450
            AFRATLEEISESSLLVHVVDISHPL++QQI+AVDKVLSELDV++IP+L+VWNKVDK +DP
Sbjct: 393  AFRATLEEISESSLLVHVVDISHPLAEQQIEAVDKVLSELDVSSIPKLMVWNKVDKVTDP 452

Query: 449  DKLKIKANEREDVICVSALTGDGLQDFCDAVQARLKDSMVWVEALVPFDKGELLNTIHQV 270
              ++++A++R DV+CVSAL+GDGL +FCDAVQ++LKDSMVW+EAL+PFD+GELL+T+HQV
Sbjct: 453  QHIRLEADKRGDVVCVSALSGDGLDEFCDAVQSKLKDSMVWIEALIPFDRGELLSTVHQV 512

Query: 269  GVVERTEYTEKGTLVRAHVPLPLARQLTPMRQLC 168
            GVVE+ EYTE GTLV+AHVPL  +R LTPMRQLC
Sbjct: 513  GVVEKAEYTENGTLVQAHVPLRFSRLLTPMRQLC 546