BLASTX nr result

ID: Coptis21_contig00003464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003464
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510997.1| Nodulation receptor kinase precursor, putati...    61   1e-07
ref|XP_003531799.1| PREDICTED: putative kinase-like protein TMKL...    60   2e-07
ref|XP_004146910.1| PREDICTED: probable leucine-rich repeat rece...    60   2e-07
ref|XP_002267207.1| PREDICTED: putative kinase-like protein TMKL...    59   3e-07
ref|XP_002328825.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07

>ref|XP_002510997.1| Nodulation receptor kinase precursor, putative [Ricinus communis]
           gi|223550112|gb|EEF51599.1| Nodulation receptor kinase
           precursor, putative [Ricinus communis]
          Length = 359

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 6/118 (5%)
 Frame = -3

Query: 404 LHGNLNSTAIIVDGNYQAIYFGFQSASSLQSNHLAGNAC--SFYSHRYEVPELFKMRDAS 231
           +HGNL S  I++D NYQ+    F     L  N  AG     +  +  Y+ PEL KM+DAS
Sbjct: 197 VHGNLKSKNILLDRNYQSYISDF--GLHLLLNPTAGQEMLEASAAEGYKAPELIKMKDAS 254

Query: 230 VESHMCSLGTILLDILSGRAPISITWSGS----LFA*LHENDNYVSISDVFHPDLLLS 69
             + + SLG ILL+++SG+ PI+   +      L   +        I+D++HPD+LLS
Sbjct: 255 ERTDIYSLGIILLELISGKEPINENPTPDEDFHLPTFMRNAVLDRRITDLYHPDILLS 312


>ref|XP_003531799.1| PREDICTED: putative kinase-like protein TMKL1-like [Glycine max]
          Length = 355

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
 Frame = -3

Query: 404 LHGNLNSTAIIVDGNYQAIYFGFQSASSLQSNHLAGNAC--SFYSHRYEVPELFKMRDAS 231
           +HGNL S  I++D +YQ   +   S   L  N  AG     S  +  Y+ PEL KM+DAS
Sbjct: 193 IHGNLKSKNILLDRSYQP--YISDSGLHLLLNPTAGQEMLESSAAQGYKAPELIKMKDAS 250

Query: 230 VESHMCSLGTILLDILSGRAPIS 162
            ES + SLG ILL++LSG+ PI+
Sbjct: 251 EESDIYSLGVILLELLSGKEPIN 273


>ref|XP_004146910.1| PREDICTED: probable leucine-rich repeat receptor-like protein
           kinase IMK3-like [Cucumis sativus]
           gi|449502236|ref|XP_004161584.1| PREDICTED: probable
           leucine-rich repeat receptor-like protein kinase
           IMK3-like [Cucumis sativus]
          Length = 357

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 11/122 (9%)
 Frame = -3

Query: 404 LHGNLNSTAIIVDGNYQAIYFGFQSASSLQSNHLAGNACSFYSHRYEVPELFKMRDASVE 225
           +HGNL S  +++D NY+     F     L S+       +  ++ Y+ PEL KM+DA+ E
Sbjct: 195 IHGNLQSKNVLLDRNYEPYVSDFGLHLLLNSSSAQEVVEASAANGYKAPELIKMKDATEE 254

Query: 224 SHMCSLGTILLDILSGRAPISITWSGSLFA*LHENDNYV-----------SISDVFHPDL 78
           + + S G ILL++LSG+ P +   +      + + D Y+            I+D+FHP++
Sbjct: 255 TDIYSYGVILLELLSGKEPFNEKPT------VPDEDFYLPSFMRNAVLGHRIADLFHPEI 308

Query: 77  LL 72
           LL
Sbjct: 309 LL 310


>ref|XP_002267207.1| PREDICTED: putative kinase-like protein TMKL1-like [Vitis vinifera]
          Length = 353

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 46/120 (38%), Positives = 62/120 (51%), Gaps = 8/120 (6%)
 Frame = -3

Query: 404 LHGNLNSTAIIVDGNYQAIYFGFQSASSLQSNHLAGNAC--SFYSHRYEVPELFKMRDAS 231
           +HGNL S  I++D N+Q     F     L  N  AG     S  +  Y  PEL KM+D  
Sbjct: 198 IHGNLKSKNILLDRNFQPYISDF--GQHLLLNPSAGQEMLESCGAQGYRAPELIKMKDVC 255

Query: 230 VESHMCSLGTILLDILSGRAPISITWSGS---LFA*LHEN---DNYVSISDVFHPDLLLS 69
            E+ + SLG ILL++L+GR PI+   S          H N   D+   I+DVF+P +LLS
Sbjct: 256 QETDIYSLGVILLELLTGREPINENPSADEDFYLPNFHRNAVLDH--RINDVFNPCILLS 313


>ref|XP_002328825.1| predicted protein [Populus trichocarpa] gi|222839123|gb|EEE77474.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 13/125 (10%)
 Frame = -3

Query: 404 LHGNLNSTAIIVDGNYQAIY--FGFQSASSLQSNHLAGNACSFYSHRYEVPELFKMRDAS 231
           +HGNL S  I++D N+      FG     +L +      A +  +  Y+ PEL KM++ +
Sbjct: 200 IHGNLKSKNILLDRNFHPCISDFGLHLLLNLTAGQEMLEASA--AEGYKAPELIKMKEVT 257

Query: 230 VESHMCSLGTILLDILSGRAPISITWSGSLFA*LHENDNYV-----------SISDVFHP 84
           +E+ + SLG ILL++LSG+ PI+   +        + D Y+            I+D++HP
Sbjct: 258 LETDIYSLGIILLELLSGKEPINENPTA-------DEDFYLPTFMRNAVLDRRIADLYHP 310

Query: 83  DLLLS 69
           D+LLS
Sbjct: 311 DILLS 315


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