BLASTX nr result
ID: Coptis21_contig00003460
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003460 (1323 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271980.1| PREDICTED: transcription factor MYB1R1 isofo... 246 9e-63 emb|CAN73090.1| hypothetical protein VITISV_028723 [Vitis vinife... 244 4e-62 ref|XP_002315700.1| predicted protein [Populus trichocarpa] gi|2... 239 1e-60 ref|XP_002283896.1| PREDICTED: transcription factor MYB1R1-like ... 225 2e-56 emb|CAN77681.1| hypothetical protein VITISV_040763 [Vitis vinifera] 225 2e-56 >ref|XP_002271980.1| PREDICTED: transcription factor MYB1R1 isoform 2 [Vitis vinifera] Length = 288 Score = 246 bits (628), Expect = 9e-63 Identities = 148/282 (52%), Positives = 172/282 (60%), Gaps = 18/282 (6%) Frame = +3 Query: 270 MSRSCSHCGHNGHNSRTCTENGGALVTPTTATSGGGFMLFGVRVAENLFRKSVSMNNLSQ 449 MSRSCS CG+NGHNSRTCTE+GGA + MLFGVR+ E FRKS SM NLSQ Sbjct: 1 MSRSCSQCGNNGHNSRTCTESGGA------GAAANDIMLFGVRITEGAFRKSASMTNLSQ 54 Query: 450 YEQLHESNSDIAAGYASDDVVHTSDGNRERKRGIPWTEEEHRMFLIGLQRVGKGDWRGIS 629 YEQ +SN+D AGYASDDVVH S +RERKRG+PWTEEEHR+FL+GLQ+VGKGDWRGIS Sbjct: 55 YEQPQDSNAD--AGYASDDVVHASARSRERKRGVPWTEEEHRLFLLGLQKVGKGDWRGIS 112 Query: 630 RNYVKTRTPTQVASHAQKYFLXXXXXXXXXXXXXLFDITA---------EEERPIQ---S 773 RN+VKTRTPTQVASHAQKYFL LFDITA EE++ Q S Sbjct: 113 RNFVKTRTPTQVASHAQKYFLRRNNHNRRRRRSSLFDITADTFMGSTILEEDQVHQETVS 172 Query: 774 PQQLNSNF-----GLSLPIFSLSFGPENTTLGQAEPTNAQAKVXXXXXXXXXXXSSRMED 938 P QL+S+ G +P F ++ P TLGQ+ K+ SS+M D Sbjct: 173 PPQLHSHLNGSAGGFPVPTFPVTMAP-ILTLGQSNQAKGPTKLIRPIPILPVPPSSKMAD 231 Query: 939 LNLNQNTMVEDSSSLSLKLCTPEXXXXXXXXXXRH-SAFQAM 1061 LNLN + D LSLK + RH SAFQAM Sbjct: 232 LNLNIPS-TADPLPLSLKPSSSTSTSPQSPTATRHSSAFQAM 272 >emb|CAN73090.1| hypothetical protein VITISV_028723 [Vitis vinifera] gi|296086475|emb|CBI32064.3| unnamed protein product [Vitis vinifera] Length = 300 Score = 244 bits (623), Expect = 4e-62 Identities = 149/293 (50%), Positives = 173/293 (59%), Gaps = 29/293 (9%) Frame = +3 Query: 270 MSRSCSHCGHNGHNSRTCTENGGALVTPTTATSGGGFMLFGVRVAENLFRKSVSMNNLSQ 449 MSRSCS CG+NGHNSRTCTE+GGA + MLFGVR+ E FRKS SM NLSQ Sbjct: 1 MSRSCSQCGNNGHNSRTCTESGGA------GAAANDIMLFGVRITEGAFRKSASMTNLSQ 54 Query: 450 YEQLHESNSDIAAGYASDDVVHTSDGNRERKRGIPWTEEEHRMFLIGLQRVGKGDWRGIS 629 YEQ +SN+D AGYASDDVVH S +RERKRG+PWTEEEHR+FL+GLQ+VGKGDWRGIS Sbjct: 55 YEQPQDSNAD--AGYASDDVVHASARSRERKRGVPWTEEEHRLFLLGLQKVGKGDWRGIS 112 Query: 630 RNYVKTRTPTQVASHAQKYFLXXXXXXXXXXXXXLFDITA---------EEERPIQ---S 773 RN+VKTRTPTQVASHAQKYFL LFDITA EE++ Q S Sbjct: 113 RNFVKTRTPTQVASHAQKYFLRRNNHNRRRRRSSLFDITADTFMGSTILEEDQVHQETVS 172 Query: 774 PQQLNSNF-----GLSLPIFSLSFGP-----------ENTTLGQAEPTNAQAKVXXXXXX 905 P QL+S+ G +P F ++ P E TLGQ+ K+ Sbjct: 173 PPQLHSHLNGSAGGFPVPTFPVTMAPVVLPVASNGSMEILTLGQSNQAKGPTKLIRPIPI 232 Query: 906 XXXXXSSRMEDLNLNQNTMVEDSSSLSLKLCTPEXXXXXXXXXXRH-SAFQAM 1061 SS+M DLNLN + D LSLK + RH SAFQAM Sbjct: 233 LPVPPSSKMADLNLNIPS-TADPLPLSLKPSSSTSTSPQSPTATRHSSAFQAM 284 >ref|XP_002315700.1| predicted protein [Populus trichocarpa] gi|222864740|gb|EEF01871.1| predicted protein [Populus trichocarpa] Length = 307 Score = 239 bits (610), Expect = 1e-60 Identities = 150/303 (49%), Positives = 176/303 (58%), Gaps = 38/303 (12%) Frame = +3 Query: 267 MMSRSCSHCGHNGHNSRTCTEN---GGALVTPTTATSGGGFMLFGVRVAENL--FRKSVS 431 MMSRSCS CG+NGHNSRTC E+ G VTPT G MLFGVRVAE FRKS S Sbjct: 1 MMSRSCSQCGNNGHNSRTCGESPCCGDQNVTPT------GIMLFGVRVAEGAASFRKSAS 54 Query: 432 MNNLSQYEQLHES-NSDIAAGYASDDVVHTSDGNRERKRGIPWTEEEHRMFLIGLQRVGK 608 M NLSQYEQ HE N+D+AAGY SDDVVH S +RERKRG+PWTEEEH++FL+GLQ+VGK Sbjct: 55 MINLSQYEQPHEEPNADVAAGYESDDVVHASGRSRERKRGVPWTEEEHKLFLLGLQKVGK 114 Query: 609 GDWRGISRNYVKTRTPTQVASHAQKYFLXXXXXXXXXXXXXLFDITAE------------ 752 GDWRGISRN+VKTRTPTQVASHAQKYFL LFDIT + Sbjct: 115 GDWRGISRNFVKTRTPTQVASHAQKYFLRRNNQNRRRRRSSLFDITTDTFMISGGSSMEE 174 Query: 753 ----EERP---IQSPQ-QLNSN--FGL---SLPIFSLSFGP-------ENTTLGQAEPTN 872 +E P + PQ +LN+N GL + P+ S P E TLGQ Sbjct: 175 DQVHQETPALALPQPQPRLNNNRPEGLPMATFPVISPVTSPLSGDNPMEKLTLGQTNVDK 234 Query: 873 AQAKVXXXXXXXXXXXSSRMEDLNLNQNTMVEDSSSLSLKLCTPEXXXXXXXXXXRHSAF 1052 K+ SS++ D+NLNQ + ++LSLKL TP S F Sbjct: 235 MSPKLFRPTPIIPIPPSSKLADINLNQKGPKDQLTALSLKLSTPSSEEQSTPASTHSSVF 294 Query: 1053 QAM 1061 QA+ Sbjct: 295 QAI 297 >ref|XP_002283896.1| PREDICTED: transcription factor MYB1R1-like [Vitis vinifera] Length = 323 Score = 225 bits (573), Expect = 2e-56 Identities = 150/303 (49%), Positives = 169/303 (55%), Gaps = 39/303 (12%) Frame = +3 Query: 270 MSRSCSHCGHNGHNSRTCTENGGALVTPTTATSGG--GFMLFGVRVAENLFRKSVSMNNL 443 MSR CS CGHNGHNSRTC E+GG GG G MLFGVRV + RKSVS+NNL Sbjct: 19 MSRCCSQCGHNGHNSRTCAESGGG----GGGGDGGSEGIMLFGVRVTVDSMRKSVSLNNL 74 Query: 444 SQYEQLHES-NSDI--AAGYAS-DDVVHTSDGNRERKRGIPWTEEEHRMFLIGLQRVGKG 611 SQYEQ HES N+D AAGY S DDV H S GNRERKRG+PWTEEEH++FL+GLQ+VGKG Sbjct: 75 SQYEQPHESSNADATPAAGYVSADDVAHHSSGNRERKRGVPWTEEEHKLFLVGLQKVGKG 134 Query: 612 DWRGISRNYVKTRTPTQVASHAQKYFLXXXXXXXXXXXXXLFDITAE-------EERPI- 767 DWRGISRN+VKTRTPTQVASHAQKYFL LFDIT E EE + Sbjct: 135 DWRGISRNFVKTRTPTQVASHAQKYFLRRNNLNRRRRRSSLFDITTESVTAVPMEEEQVL 194 Query: 768 ----------QSPQ---QLNSNFGLS-LPIFSLSFGP-----------ENTTLGQAEPTN 872 QSP+ + S G +P F + P EN TLGQ + Sbjct: 195 HHQENTSQSQQSPKTFSETGSGGGFPVVPAFPMPINPVVVPVPIQNPMENLTLGQNDVNT 254 Query: 873 AQAKVXXXXXXXXXXXSSRMEDLNLNQNTMVEDSSSLSLKLCTPEXXXXXXXXXXRHSAF 1052 + DLNLN + V D S LSLKL + RHSAF Sbjct: 255 RLVR-----PIPVLPIPPESTDLNLNLKSSV-DPSPLSLKL-SLSSNQNHPNQPSRHSAF 307 Query: 1053 QAM 1061 QAM Sbjct: 308 QAM 310 >emb|CAN77681.1| hypothetical protein VITISV_040763 [Vitis vinifera] Length = 305 Score = 225 bits (573), Expect = 2e-56 Identities = 150/303 (49%), Positives = 169/303 (55%), Gaps = 39/303 (12%) Frame = +3 Query: 270 MSRSCSHCGHNGHNSRTCTENGGALVTPTTATSGG--GFMLFGVRVAENLFRKSVSMNNL 443 MSR CS CGHNGHNSRTC E+GG GG G MLFGVRV + RKSVS+NNL Sbjct: 1 MSRCCSQCGHNGHNSRTCAESGGG----GGGGDGGSEGIMLFGVRVTVDSMRKSVSLNNL 56 Query: 444 SQYEQLHES-NSDI--AAGYAS-DDVVHTSDGNRERKRGIPWTEEEHRMFLIGLQRVGKG 611 SQYEQ HES N+D AAGY S DDV H S GNRERKRG+PWTEEEH++FL+GLQ+VGKG Sbjct: 57 SQYEQPHESSNADATPAAGYVSADDVAHHSSGNRERKRGVPWTEEEHKLFLVGLQKVGKG 116 Query: 612 DWRGISRNYVKTRTPTQVASHAQKYFLXXXXXXXXXXXXXLFDITAE-------EERPI- 767 DWRGISRN+VKTRTPTQVASHAQKYFL LFDIT E EE + Sbjct: 117 DWRGISRNFVKTRTPTQVASHAQKYFLRRNNLNRRRRRSSLFDITTESVTAVPMEEEQVL 176 Query: 768 ----------QSPQ---QLNSNFGLS-LPIFSLSFGP-----------ENTTLGQAEPTN 872 QSP+ + S G +P F + P EN TLGQ + Sbjct: 177 HHQENTSQSQQSPKTFSETGSGGGFPVVPAFPMPINPVVVPVPIQNPMENLTLGQNDVNT 236 Query: 873 AQAKVXXXXXXXXXXXSSRMEDLNLNQNTMVEDSSSLSLKLCTPEXXXXXXXXXXRHSAF 1052 + DLNLN + V D S LSLKL + RHSAF Sbjct: 237 RLVR-----PIPVLPIPPESTDLNLNLKSSV-DPSPLSLKL-SLSSNQNHPNQPSRHSAF 289 Query: 1053 QAM 1061 QAM Sbjct: 290 QAM 292