BLASTX nr result

ID: Coptis21_contig00003452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003452
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36439.1| unknown [Lotus japonicus] gi|388500218|gb|AFK3817...    92   3e-17
ref|XP_002306835.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
gb|ABK94628.1| unknown [Populus trichocarpa]                           92   3e-17
ref|NP_001234993.1| uncharacterized protein LOC100500227 precurs...    91   7e-17
ref|XP_002529307.1| conserved hypothetical protein [Ricinus comm...    88   6e-16

>gb|AFK36439.1| unknown [Lotus japonicus] gi|388500218|gb|AFK38175.1| unknown
           [Lotus japonicus]
          Length = 156

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/59 (72%), Positives = 50/59 (84%)
 Frame = -2

Query: 403 QRFNDYGVDGGPAAKALRPKFDVLTGHVTSQIGLQVPEIEIKQLVAAAIALKGVGGLLF 227
           Q FN++GVDGGPAAK+LRPKFD  T  V SQ+G Q+PEI+IK L+A AIALKGVGGLLF
Sbjct: 22  QEFNEFGVDGGPAAKSLRPKFDTFTSRVHSQVGFQLPEIDIKVLIAGAIALKGVGGLLF 80


>ref|XP_002306835.1| predicted protein [Populus trichocarpa] gi|222856284|gb|EEE93831.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/59 (72%), Positives = 50/59 (84%)
 Frame = -2

Query: 403 QRFNDYGVDGGPAAKALRPKFDVLTGHVTSQIGLQVPEIEIKQLVAAAIALKGVGGLLF 227
           Q FN++GVDGGPAAKAL+PKF V T HV S  G+QVPEIEIK LV+AAI LKG+GG+LF
Sbjct: 22  QEFNEFGVDGGPAAKALKPKFGVFTSHVQSHAGIQVPEIEIKHLVSAAIFLKGIGGILF 80


>gb|ABK94628.1| unknown [Populus trichocarpa]
          Length = 157

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/59 (72%), Positives = 50/59 (84%)
 Frame = -2

Query: 403 QRFNDYGVDGGPAAKALRPKFDVLTGHVTSQIGLQVPEIEIKQLVAAAIALKGVGGLLF 227
           Q FN++GVDGGPAAKAL+PKF V T HV S  G+QVPEIEIK LV+AAI LKG+GG+LF
Sbjct: 22  QEFNEFGVDGGPAAKALKPKFGVFTSHVQSHAGIQVPEIEIKHLVSAAIFLKGIGGILF 80


>ref|NP_001234993.1| uncharacterized protein LOC100500227 precursor [Glycine max]
           gi|255629760|gb|ACU15229.1| unknown [Glycine max]
          Length = 156

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 42/62 (67%), Positives = 51/62 (82%)
 Frame = -2

Query: 412 TTTQRFNDYGVDGGPAAKALRPKFDVLTGHVTSQIGLQVPEIEIKQLVAAAIALKGVGGL 233
           +T Q+FN+YGVDGGPA KALRPKFD  T  V SQ+G Q+PEI +K L+A AIALKG+GG+
Sbjct: 19  STYQQFNEYGVDGGPATKALRPKFDAFTHRVHSQVGFQIPEINLKFLIAGAIALKGLGGV 78

Query: 232 LF 227
           LF
Sbjct: 79  LF 80


>ref|XP_002529307.1| conserved hypothetical protein [Ricinus communis]
           gi|223531231|gb|EEF33076.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 157

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/59 (69%), Positives = 49/59 (83%)
 Frame = -2

Query: 403 QRFNDYGVDGGPAAKALRPKFDVLTGHVTSQIGLQVPEIEIKQLVAAAIALKGVGGLLF 227
           Q FND+GVDGGPAAK+  PKF+V + HV+S  G QVP +EIK LVAAAIA+KG+GGLLF
Sbjct: 22  QEFNDFGVDGGPAAKSFAPKFNVFSRHVSSNTGFQVPPVEIKHLVAAAIAVKGLGGLLF 80


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