BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003448
         (1424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521025.1| conserved hypothetical protein [Ricinus comm...   207   4e-69
emb|CAN69795.1| hypothetical protein VITISV_022545 [Vitis vinifera]   254   3e-65
gb|AFK40701.1| unknown [Medicago truncatula]                          210   5e-65
ref|XP_002301692.1| predicted protein [Populus trichocarpa] gi|2...   244   4e-62
ref|NP_564209.1| NHL domain-containing protein [Arabidopsis thal...   243   1e-61

>ref|XP_002521025.1| conserved hypothetical protein [Ricinus communis]
           gi|223539862|gb|EEF41442.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 408

 Score =  207 bits (527), Expect(2) = 4e-69
 Identities = 108/220 (49%), Positives = 155/220 (70%)
 Frame = +2

Query: 77  LILEEGYTVSTVLNANKLPHPINPSSVLPTLNNAGGTHSVVVLDSPSSVFYTVPFPISQD 256
           LILE+GYTV+T+++ +KL   INP +VL    ++     +++LDS  S  YT+ FPISQ+
Sbjct: 30  LILEDGYTVTTIIDGHKLE--INPHAVLSRPQSS----DLILLDSSHSTIYTISFPISQE 83

Query: 257 GDVRRYAGNGSAGFVDGELSFAKFDRPRSFAVDFKGNVYVADKSNHAIRKISKSGVTTIA 436
             V+R +G+G AG  DGE   A+F++PRSFAVD KGN+YVAD+ N  IRKI+ SGV+TIA
Sbjct: 84  SVVKRLSGDGVAGLSDGEPGSARFNKPRSFAVDNKGNIYVADRLNGTIRKITNSGVSTIA 143

Query: 437 GGHSRKPGNVDGPAQNASFSEDFELVFVPGVCALLITDRGNRLVRQMNLKPNDCKSGSYW 616
           GG+S+  G  DGPAQNA+FS DFE+ FV   CALLI+D GN+LVR++ LKP+DC + S+ 
Sbjct: 144 GGYSKGFGREDGPAQNATFSSDFEVAFVAEECALLISDHGNQLVRRLPLKPDDCATASHS 203

Query: 617 QLGSTGSIWLGVICFILGSIITLVVTFVVYPFIISRTGNH 736
            LG+  S W+  +  ++  +I + + FV+ P I+   G++
Sbjct: 204 ALGAV-SFWVLGLGLVMSCLIGIAIGFVIRPHIVPYEGSN 242



 Score = 82.4 bits (202), Expect(2) = 4e-69
 Identities = 61/163 (37%), Positives = 87/163 (53%), Gaps = 11/163 (6%)
 Frame = +3

Query: 753  SETWKHCQINLERQVVIVCSDIKSVVV--SFYFLVVRLVRMSLSQLSLMFRIPRVEKQFL 926
            SETW+ C INL +QV++ C DI+S +   S Y L+ RL+ +SLS LSLMFRI  V  Q L
Sbjct: 247  SETWRLCLINLAKQVLMFCFDIRSAIARSSPYTLMSRLLWLSLSHLSLMFRINTVGSQTL 306

Query: 927  CREPSSLFSMDGAV--------NHEITKPQICADQLKDMMSFDEDLDVSEEIDKSFKQGD 1082
             +   S  S  G V        + E    Q+CA +LKD++S +   +   EI  +   G+
Sbjct: 307  SKGVDSQTSSKGFVSLLDSDVNSFETETSQLCA-ELKDLISLNGPSNSKGEISNT---GE 362

Query: 1083 EDHDKSDVSTSSNGAIDAAIYANFVEFANQARQ-KHPMDGPFV 1208
            +D   +DV    N  ID  I  N + FA  A++   P++G  V
Sbjct: 363  QDQLGNDVLLDGNPRIDTMIQENIMGFAKVAQETTTPLNGTLV 405


>emb|CAN69795.1| hypothetical protein VITISV_022545 [Vitis vinifera]
          Length = 459

 Score =  254 bits (650), Expect = 3e-65
 Identities = 147/280 (52%), Positives = 190/280 (67%), Gaps = 11/280 (3%)
 Frame = +2

Query: 68  SAQLILEEGYTVSTVLNANKLPHPINPSSVLPTLNNAGGTHSVVVLDSPSSVFYTVPFPI 247
           SA L+LE+GYTV TV + NKL   INP S+LP      G+   ++LDS  SVFYTV  P+
Sbjct: 25  SADLVLEDGYTVRTVFDGNKLE--INPHSILPRY----GSSDFIILDSSKSVFYTVXSPL 78

Query: 248 SQDGDVRRYAGNGSAGFVDGELSFAKFDRPRSFAVDFKGNVYVADKSNHAIRKISKSGVT 427
           SQ+ ++ R +G+ SAGF DG+ + A F +PRSFAVD KGNVYVAD+SN  IRKI+  GVT
Sbjct: 79  SQESEINRLSGS-SAGFSDGDSASAMFSKPRSFAVDLKGNVYVADQSNGVIRKITNRGVT 137

Query: 428 T-IAGGHSRKPGNVDGPAQNASFSEDFELVFVPGVCALLITDRGNRLVRQMNLKPNDCKS 604
           T IAGG+++K G VDGPAQNASFS+DFELVFVP  CA+L++DRG++LVRQ++LK  DC+ 
Sbjct: 138 TTIAGGYAQKTGKVDGPAQNASFSKDFELVFVPEKCAVLVSDRGSQLVRQIDLKVEDCRR 197

Query: 605 GSYWQLGSTGSIW----LGVICFILGSIITLVVTFVVYPFIISRTGNHRLPLVQRDMEAL 772
                LG    +W    LGV C     ++  +V  +  P++I  TG+    L QRD+EAL
Sbjct: 198 SPQSVLGG-AFLWVLLGLGVSC-----LVGFIVGIISRPYVIPHTGSLLPTLFQRDVEAL 251

Query: 773 PNQSGETSSDSLLRHQKRS------C*LLLFSGQAC*DEP 874
           PN SGETS+D+LLRHQK+S         LL S  +C  EP
Sbjct: 252 PNPSGETSTDALLRHQKQSQFSRKESVSLLDSDDSCISEP 291



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 31/79 (39%), Positives = 50/79 (63%)
 Frame = +3

Query: 999  ADQLKDMMSFDEDLDVSEEIDKSFKQGDEDHDKSDVSTSSNGAIDAAIYANFVEFANQAR 1178
            ADQL+D+ +FD   ++S   D+ FK+GD+D  K D+S  + G I++ I ANF+ F  QA+
Sbjct: 330  ADQLEDLXTFDGSSELSNXTDRIFKEGDDDQGKRDISPETCGRIESMIEANFMGFVEQAK 389

Query: 1179 QKHPMDGPFVGNSGLVKRK 1235
               P++    GN+G+  R+
Sbjct: 390  VTTPVELCSSGNTGVGGRR 408


>gb|AFK40701.1| unknown [Medicago truncatula]
          Length = 384

 Score =  210 bits (534), Expect(2) = 5e-65
 Identities = 113/215 (52%), Positives = 151/215 (70%), Gaps = 2/215 (0%)
 Frame = +2

Query: 80  ILEEGYTVSTVLNANKLPHPINPSSVLPTLNNAGGTHSVVVLDSPSSVFYTVPFPISQDG 259
           I EEGYT++T+L+ +KL   INP S+L    ++     ++VLDS +S FYTV  PISQ+ 
Sbjct: 29  IPEEGYTITTILDGHKLH--INPFSILQRPISS----DLIVLDSTNSTFYTVQLPISQES 82

Query: 260 DVRRYAGNGSAGFVDGELSFAKFDRPRSFAVDFKGNVYVADKSNHAIRKISKSGVTTIAG 439
             +R++GNGS G+ DG++  A+FD+PRSFAVDF+GNVYVAD+ N  IRKIS +GVTTIAG
Sbjct: 83  VFKRFSGNGSPGYEDGDVGLARFDKPRSFAVDFRGNVYVADRVNKVIRKISTNGVTTIAG 142

Query: 440 GHSRKPGNVDGPAQNASFSEDFELVFVPGVCALLITDRGNRLVRQMNLKPNDCKSGSYWQ 619
           G S K    DGP QNASFS DFEL F+P +CALL++D  ++LV Q+NLK  DC  GS   
Sbjct: 143 GSSEKSSIKDGPVQNASFSNDFELTFIPALCALLVSDHMHQLVHQINLKGEDCTLGSKSA 202

Query: 620 LGS--TGSIWLGVICFILGSIITLVVTFVVYPFII 718
           LG+  T ++ LG+ C     I+ LV+  V+ P+II
Sbjct: 203 LGAVMTWTLGLGLSC-----ILGLVIGIVIRPYII 232



 Score = 65.9 bits (159), Expect(2) = 5e-65
 Identities = 45/102 (44%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
 Frame = +3

Query: 750  FSETWKHCQINLERQVVIVCSDIKSVVVS-----FYFLVVRLVRMSLSQLSLMFRIPRVE 914
            F+ T KHCQ NL + V  + S IKS V S      + + VRL  +SLS L LMF I  V 
Sbjct: 242  FTATRKHCQTNLVKLVPTLYSGIKSAVASCGCSSVFTVAVRLWELSLSLLVLMFNIDFVS 301

Query: 915  KQFLCREPSSLFSMDGAVNHEITKPQICADQLKDMMSFDEDL 1040
             +    E  SL  +D   + EI+K     DQLKD+MSFDE L
Sbjct: 302  PRRPHLESVSLLDLDAYNSGEISKSSKYFDQLKDLMSFDEHL 343


>ref|XP_002301692.1| predicted protein [Populus trichocarpa] gi|222843418|gb|EEE80965.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score =  244 bits (623), Expect = 4e-62
 Identities = 126/254 (49%), Positives = 178/254 (70%), Gaps = 1/254 (0%)
 Frame = +2

Query: 74  QLILEEGYTVSTVLNANKLPHPINPSSVLPTLNNAGGTHSVVVLDSPSSVFYTVPFPISQ 253
           Q++LE+GY V+TV++ +KL   +NP +V    ++      +VVLDS  SVFYT+PFPISQ
Sbjct: 22  QIMLEDGYMVTTVMDGHKLN--VNPHAVQLRSSD------LVVLDSSKSVFYTLPFPISQ 73

Query: 254 DGD-VRRYAGNGSAGFVDGELSFAKFDRPRSFAVDFKGNVYVADKSNHAIRKISKSGVTT 430
           DG  V+R +G+G  G++DGE   A+F++P+SF VD +GNVYVAD+ NHA+RKIS SG+TT
Sbjct: 74  DGVMVKRLSGSGDKGYIDGEPGLARFNKPKSFTVDLRGNVYVADQLNHAVRKISSSGMTT 133

Query: 431 IAGGHSRKPGNVDGPAQNASFSEDFELVFVPGVCALLITDRGNRLVRQMNLKPNDCKSGS 610
              G+  + G  DGP + A+FS DFE++FVP +CALLI+D GN+L+RQ++LK  DC  GS
Sbjct: 134 TIAGNYSQIGRQDGPGETATFSTDFEVLFVPQICALLISDHGNQLLRQVDLKQEDCIIGS 193

Query: 611 YWQLGSTGSIWLGVICFILGSIITLVVTFVVYPFIISRTGNHRLPLVQRDMEALPNQSGE 790
              LG+    W  V+  +L  +  L   F + P++I  TG  + P  Q+DMEALPNQSGE
Sbjct: 194 QSALGAV-KFW--VLGLVLSCLFGLATGFAIRPYVIPHTGRRQTPSFQQDMEALPNQSGE 250

Query: 791 TSSDSLLRHQKRSC 832
           ++++ LLR QKR+C
Sbjct: 251 SNTEELLRRQKRNC 264


>ref|NP_564209.1| NHL domain-containing protein [Arabidopsis thaliana]
           gi|15724248|gb|AAL06517.1|AF412064_1 At1g23890/T23E23_13
           [Arabidopsis thaliana] gi|16974539|gb|AAL31179.1|
           At1g23890/T23E23_13 [Arabidopsis thaliana]
           gi|110742589|dbj|BAE99208.1| hypothetical protein
           [Arabidopsis thaliana] gi|332192326|gb|AEE30447.1| NHL
           domain-containing protein [Arabidopsis thaliana]
          Length = 261

 Score =  243 bits (619), Expect = 1e-61
 Identities = 132/252 (52%), Positives = 172/252 (68%), Gaps = 1/252 (0%)
 Frame = +2

Query: 65  VSAQLILEEGYTVSTVLNANKLPHPINPSSVLPTLNNAGGTHSVVVLDSPSSVFYTVPFP 244
           VS +++LEEGY V+TV++ +K    +NP     T++   G+ +++VLDS  S FYT  FP
Sbjct: 19  VSGKIVLEEGYEVTTVVDGHK--SGLNPY----TIHALPGSSNLIVLDSSGSTFYTTSFP 72

Query: 245 ISQDGDVRRYAGNGSAGFVDGELSFAKFDRPRSFAVDFKGNVYVADKSNHAIRKISKSG- 421
           +S D  + R+AG+GS+G VDG+   ++F +PR FAVD KGNVYVADKSN AIRKIS SG 
Sbjct: 73  LSVDSVINRFAGDGSSGHVDGKAGNSRFSKPRGFAVDAKGNVYVADKSNKAIRKISSSGS 132

Query: 422 VTTIAGGHSRKPGNVDGPAQNASFSEDFELVFVPGVCALLITDRGNRLVRQMNLKPNDCK 601
           VTTIAGG S+  G+ DGPAQNA+FS DFE+ FVP  C LL++D GN ++RQ+NLK  DC 
Sbjct: 133 VTTIAGGISKAFGHRDGPAQNATFSSDFEITFVPQRCCLLVSDHGNEMIRQINLKEEDCL 192

Query: 602 SGSYWQLGSTGSIWLGVICFILGSIITLVVTFVVYPFIISRTGNHRLPLVQRDMEALPNQ 781
             S+  LG T S+W   I  +L  I+ + + F V P++I  TG    PLV  DMEA PNQ
Sbjct: 193 ENSHSNLG-TYSLW--SIGIVLSCILGVAIGFAVRPYVIRHTGRSEPPLVHHDMEASPNQ 249

Query: 782 SGETSSDSLLRH 817
            G TSSD LL H
Sbjct: 250 IGGTSSDLLLLH 261