BLASTX nr result
ID: Coptis21_contig00003430
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003430 (1737 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like... 651 0.0 ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|2... 619 e-174 ref|XP_004140848.1| PREDICTED: flap endonuclease GEN-like 2-like... 588 e-165 ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like... 583 e-164 ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago... 582 e-163 >ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like [Vitis vinifera] gi|297741051|emb|CBI31782.3| unnamed protein product [Vitis vinifera] Length = 565 Score = 651 bits (1680), Expect = 0.0 Identities = 316/430 (73%), Positives = 369/430 (85%), Gaps = 1/430 (0%) Frame = -2 Query: 1703 MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVQLQNVCKSHSSIKDKVYLRSLFHR 1524 MGVKNLWDILESCKKTLPL+HLQNKRVCIDLSCW+VQLQNV KSH+SIKDK+YL+ LFHR Sbjct: 1 MGVKNLWDILESCKKTLPLYHLQNKRVCIDLSCWMVQLQNVNKSHASIKDKLYLKGLFHR 60 Query: 1523 LRALLALNCSLVLVADGSIPAIKLSTYRRRLGSGSEATRDEKKSHKL-SLPRNMGSEFSC 1347 LRAL+ALNCSL+ V DGSIPAIKL+TYRRRL SG+E TRDE SH + SL RNMGSEFSC Sbjct: 61 LRALIALNCSLLFVTDGSIPAIKLATYRRRLNSGTEVTRDETNSHNVPSLRRNMGSEFSC 120 Query: 1346 MIKEAKVLGMALGIPCLDSIEEADAQCALLNSESMCDGCFTADSDVFLFGAKTIYRDIDL 1167 MIKEAKVLG+ALGIPCLD IEEA+AQCALLNSES+CDGCFT+DSDVFLFGA+T+YRDI L Sbjct: 121 MIKEAKVLGLALGIPCLDGIEEAEAQCALLNSESLCDGCFTSDSDVFLFGARTVYRDICL 180 Query: 1166 GDGGHVVCYEMVDIERKLGFGRNSLITLALLLGSDYSHGVHGFGPETACQIVRSFGDHNV 987 G+GG+VVCYEM DIE LGFGRNSLITLALLLGSDYS GVHGFGPE+ACQIV+S G+ V Sbjct: 181 GEGGYVVCYEMADIESTLGFGRNSLITLALLLGSDYSQGVHGFGPESACQIVKSVGEEVV 240 Query: 986 LRQVASEGFAFVKKTKGLKKQGEVRNCDANKENSLGYRQKNIDEKDMQKDHQFIKVIDAY 807 L+++A EG +F KK+KG +KQG+V C+ +KEN + + NI+ + +F++VIDAY Sbjct: 241 LKKIALEGISFAKKSKGSRKQGQVLKCN-DKENCSDH-EMNINGSEHSSQREFLRVIDAY 298 Query: 806 LKPKCHSPDSEMVHRVLVHHPFRRSELQKLCSQFFGWPSEKTDEYILPKISERDLRRFAI 627 LKPKCHS DS+ VHR L PF+R+E QK+C+Q F WP EKTDEYILPKI+ERDLRRFA Sbjct: 299 LKPKCHSADSDAVHRALALLPFQRTEAQKICAQLFEWPPEKTDEYILPKIAERDLRRFAN 358 Query: 626 LRSTSSEFGVQLPLQEIPVTCPISAIIKRRIVQGSKCFEVAWKEYDGLKSSVVPADLIEC 447 LRSTSS G+ PL EIPV CPIS IIK R VQG +CFEV+W+E+DGLKSS++PA+L++ Sbjct: 359 LRSTSSNLGIHFPLHEIPVKCPISGIIKHRKVQGRECFEVSWEEFDGLKSSIIPAELVKS 418 Query: 446 ACPEKIVEFE 417 ACPEKIVEFE Sbjct: 419 ACPEKIVEFE 428 >ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|222869460|gb|EEF06591.1| predicted protein [Populus trichocarpa] Length = 541 Score = 619 bits (1595), Expect = e-174 Identities = 336/568 (59%), Positives = 404/568 (71%), Gaps = 16/568 (2%) Frame = -2 Query: 1703 MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVQLQNVCKSHSS-IKDKVYLRSLFH 1527 MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCW+VQLQNV K+H +KDK Y+R+LFH Sbjct: 1 MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWMVQLQNVNKTHCGLVKDKPYIRNLFH 60 Query: 1526 RLRALLALNCSLVLVADGSIPAIKLSTYRRRLGSGSEATRDEKKSHKL-SLPRNMGSEFS 1350 RLRAL+ALNCSL+ VADGSIPAIKL+TYRRRL G E T+DE S K SL RNMGSEFS Sbjct: 61 RLRALIALNCSLIFVADGSIPAIKLATYRRRLNLGLEVTQDETNSQKACSLRRNMGSEFS 120 Query: 1349 CMIKEAKVLGMALGIPCLDSIEEADAQCALLNSESMCDGCFTADSDVFLFGAKTIYRDID 1170 CMIKEAK +G+ALGIPCLDSIEEA+AQCALLN+ES+CDGCF++DSDVFLFGA+T+YRDI Sbjct: 121 CMIKEAKDIGLALGIPCLDSIEEAEAQCALLNTESLCDGCFSSDSDVFLFGARTVYRDIC 180 Query: 1169 LGDGGHVVCYEMVDIERKLGFGRNSLITLALLLGSDYSHGVHGFGPETACQIVRSFGDHN 990 LG+G HVVCYEM ++ERKLGFGRNSLITLAL+LGSDYS GVHG GPE+ACQIV+S GD N Sbjct: 181 LGEG-HVVCYEMEEVERKLGFGRNSLITLALILGSDYSPGVHGLGPESACQIVKSIGDSN 239 Query: 989 VLRQVASEGFAFVKKTKGLKKQGEVRNCDANKENSLGYRQKNIDEKDMQKDHQFIKVI-- 816 VL+++ASEG F KK K KKQ + K NSL + ++ + +++ Sbjct: 240 VLQKIASEGLPFAKKIKTSKKQMR-----SKKTNSL--------DSEIHFNGKYLLCCKT 286 Query: 815 ------DAYLKPKCHSPDSEMVHRVLVHHPFRRSELQKLCSQFFGWPSEKTDEYILPKIS 654 +A K DS+ RVL HPF+R +LQ +C+QFFGWP EKTDEY LPKI+ Sbjct: 287 LKCLRQEAITIQKGRMTDSDAACRVLSQHPFQRLKLQGICAQFFGWPPEKTDEYTLPKIA 346 Query: 653 ERDLRRFAILRSTSSEFGVQLPLQEIPVTCPISAIIKRRIVQGSKCFEVAWKEYDGLKSS 474 ERDLRRFA LRSTSSE GV LPLQ+IPV CP+S ++K+R VQG++CFEV W+ +DGLK+S Sbjct: 347 ERDLRRFANLRSTSSELGVNLPLQKIPVKCPVSGVVKQRKVQGTECFEVLWEGFDGLKTS 406 Query: 473 VVPADLIECACPEKIVEFEE--XXXXXXXXXXXXXXXXXXTAAMXXXXXXXXXXXXXIES 300 +VPADL+E ACPEKI EFEE AM IE Sbjct: 407 IVPADLLESACPEKIAEFEEKTALGKKQNQRKPGSKKSGNRLAMAEIDLKLQTLLLDIEP 466 Query: 299 ENNAVSGSTPRRGAHTELPIGKALPEVIDILSPSPC----KTSKLQKTIDPLVDVIYVSE 132 +N ++ + EVID+ SPSP S+ Q+ D +VI +SE Sbjct: 467 GSNTACSTSFQY-------------EVIDLCSPSPVARTRTVSRCQRVNDQHSEVIDLSE 513 Query: 131 SETDTSPEYARKARELRLFIASIKTDVS 48 SE + SPE+ARKAR LR+FIASI+ D+S Sbjct: 514 SENEMSPEHARKARALRMFIASIRDDMS 541 >ref|XP_004140848.1| PREDICTED: flap endonuclease GEN-like 2-like [Cucumis sativus] Length = 563 Score = 588 bits (1517), Expect = e-165 Identities = 321/578 (55%), Positives = 388/578 (67%), Gaps = 30/578 (5%) Frame = -2 Query: 1703 MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVQLQNVCKSHSSIKDKVYLRSLFHR 1524 MGVKNLWDILESCKKTLPLH LQNKR+CIDLSCWIV+L +V KSH K YL+ LF+R Sbjct: 1 MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSCWIVELSSVSKSHCHSNSKFYLKGLFYR 60 Query: 1523 LRALLALNCSLVLVADGSIPAIKLSTYRRRLGSGSEATRDEKKSHKL-SLPRNMGSEFSC 1347 LR L+ALNCSL+ V DGSIP IKLSTYRRRL +G+E + + ++ SL RN GSEFS Sbjct: 61 LRTLIALNCSLIFVTDGSIPGIKLSTYRRRLNNGNEVAQTDANPQQICSLKRNKGSEFSL 120 Query: 1346 MIKEAKVLGMALGIPCLDSIEEADAQCALLNSESMCDGCFTADSDVFLFGAKTIYRDIDL 1167 MIKEA+ LG+ALGIPCLD++EEA+AQCALLNSE +CDGCFT+DSD FLFGA+T+YRDI L Sbjct: 121 MIKEAQALGLALGIPCLDAVEEAEAQCALLNSELLCDGCFTSDSDAFLFGARTVYRDICL 180 Query: 1166 GDGGHVVCYEMVDIERKLGFGRNSLITLALLLGSDYSHGVHGFGPETACQIVRSFGDHNV 987 GD GHVVCYEM DIE +LGFGRNS+IT ALLLGSDYS GV+G G E+ACQ+V++ GD V Sbjct: 181 GDSGHVVCYEMDDIETRLGFGRNSMITFALLLGSDYSQGVYGMGRESACQLVKAVGDGAV 240 Query: 986 LRQVASEGFAFVKKTKGLKKQGEVRNCDANKENSLGYRQKNIDEKDMQKDHQFIKVIDAY 807 L+++ SEG A KK + KKQG ++ + M K +F +VIDAY Sbjct: 241 LQKITSEGLALAKKGENSKKQGLPKSGHGHY---------------MLKCDEFSEVIDAY 285 Query: 806 LKPKCHSPDSEMVHRVLVHHPFRRSELQKLCSQFFGWPSEKTDEYILPKISERDLRRFAI 627 LKPKCHS DSE V RVL HPF+ +LQ++C++FF W EKTDE ILPKI+ERDLRRFA Sbjct: 286 LKPKCHSADSEAVTRVLDQHPFQHVKLQQICAEFFEWSPEKTDENILPKIAERDLRRFAN 345 Query: 626 LRSTSSEFGVQLPLQEIPVTCPISAIIKRRIVQGSKCFEVAWKEYDGLKSSVVPADLIEC 447 +RS +SE G +PLQEIPV+CPIS I+K R VQG++C+EV+WK GL SVV ADL++ Sbjct: 346 IRSRTSELGFNIPLQEIPVSCPISGIVKHRKVQGNECYEVSWKNI-GLNLSVVSADLLQR 404 Query: 446 ACPEKIVEFEEXXXXXXXXXXXXXXXXXXTAAMXXXXXXXXXXXXXIESENNAV------ 285 ACPE I+EFEE A M IESE+ V Sbjct: 405 ACPEMIIEFEEKRADGKKQNKGKTKTKKSAAVMAEIDKRLKTLLLEIESESRVVHNISHV 464 Query: 284 --SGSTPRRGAHTEL---------PI--------GKALPEVIDILSPSPC----KTSKLQ 174 T G H EL PI EVID+LSPSP SK Q Sbjct: 465 PIDSKTSGTGVH-ELNQEVFLNIEPIIVDHARSCSTKRIEVIDLLSPSPAIQTRNVSKFQ 523 Query: 173 KTIDPLVDVIYVSESETDTSPEYARKARELRLFIASIK 60 + +DVI +S++E D SPE+ RKARELR F+AS+K Sbjct: 524 QKTSQKIDVIDLSDTEIDQSPEHERKARELRSFLASLK 561 >ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like [Glycine max] Length = 588 Score = 583 bits (1502), Expect = e-164 Identities = 286/433 (66%), Positives = 348/433 (80%), Gaps = 3/433 (0%) Frame = -2 Query: 1703 MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVQLQNVCKSHSSIKDKVYLRSLFHR 1524 MGVKNLWD+LESCKKT+PLHHLQNKRVC+DLSCW+VQL +V KSH+ +K+KVYLR LFHR Sbjct: 1 MGVKNLWDVLESCKKTVPLHHLQNKRVCVDLSCWMVQLHSVSKSHACVKEKVYLRGLFHR 60 Query: 1523 LRALLALNCSLVLVADGSIPAIKLSTYRRRLGSGSE---ATRDEKKSHKLSLPRNMGSEF 1353 LRAL+ALNCSL+ V+DG+IPAIKLSTYRRRL G E A + SL RNMGSEF Sbjct: 61 LRALIALNCSLIFVSDGAIPAIKLSTYRRRLNVGKEVQVAQNETNLQKATSLQRNMGSEF 120 Query: 1352 SCMIKEAKVLGMALGIPCLDSIEEADAQCALLNSESMCDGCFTADSDVFLFGAKTIYRDI 1173 SCMIKEAKVLGMALGI CL+ IEEA+AQCALLN ES+CDGCF++DSD+FLFGA+T+YRDI Sbjct: 121 SCMIKEAKVLGMALGISCLNGIEEAEAQCALLNFESLCDGCFSSDSDIFLFGARTVYRDI 180 Query: 1172 DLGDGGHVVCYEMVDIERKLGFGRNSLITLALLLGSDYSHGVHGFGPETACQIVRSFGDH 993 LGDGG+VVCYEM DIERKLGFGR+SLI L+LLLGSDY GVHG GPE+ACQIV+S GD Sbjct: 181 CLGDGGYVVCYEMTDIERKLGFGRDSLIALSLLLGSDYYQGVHGLGPESACQIVKSIGDK 240 Query: 992 NVLRQVASEGFAFVKKTKGLKKQGEVRNCDANKENSLGYRQKNIDEKDMQKDHQFIKVID 813 +L++ ASEG +VKK KG+ + + + + Y KN D++ D ++VI+ Sbjct: 241 YILKKFASEGLGWVKKRKGIP---SILHSNLIILILILYSCKN----DLRPDDNILQVIN 293 Query: 812 AYLKPKCHSPDSEMVHRVLVHHPFRRSELQKLCSQFFGWPSEKTDEYILPKISERDLRRF 633 AY+KPKCH DS++VH+ L +PF+R++LQ++C FF WPSEKTD YILP I+ER+LRRF Sbjct: 294 AYMKPKCHQADSDIVHKALAQYPFQRTKLQQICVGFFEWPSEKTDGYILPNIAERNLRRF 353 Query: 632 AILRSTSSEFGVQLPLQEIPVTCPISAIIKRRIVQGSKCFEVAWKEYDGLKSSVVPADLI 453 A LR TSSE G+ LPL EIPV CP+S IIK R VQG +C+EV+W+ DGL++S+VPADLI Sbjct: 354 ANLRLTSSEVGLNLPLHEIPVKCPVSEIIKSRRVQGRECYEVSWEGMDGLETSIVPADLI 413 Query: 452 ECACPEKIVEFEE 414 E AC EKI+EFEE Sbjct: 414 ESACREKILEFEE 426 Score = 58.5 bits (140), Expect = 5e-06 Identities = 31/62 (50%), Positives = 45/62 (72%), Gaps = 4/62 (6%) Frame = -2 Query: 224 EVIDILSPSPCKTSKL----QKTIDPLVDVIYVSESETDTSPEYARKARELRLFIASIKT 57 E+ID+LSPSP K S L Q++ D ++VI +S+SE D S E +KA+ELRLF+ASI+ Sbjct: 526 EIIDLLSPSPPKKSNLFSKCQQSSDQHIEVINLSDSENDMSVERKQKAKELRLFLASIRN 585 Query: 56 DV 51 ++ Sbjct: 586 EI 587 >ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago truncatula] gi|355494502|gb|AES75705.1| Flap endonuclease GEN-like protein [Medicago truncatula] Length = 571 Score = 582 bits (1500), Expect = e-163 Identities = 286/431 (66%), Positives = 343/431 (79%), Gaps = 1/431 (0%) Frame = -2 Query: 1703 MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVQLQNVCKSHSSIKDKVYLRSLFHR 1524 MGVKNLWDILESCKKT+PLHHLQNKRVC+DLSCW+VQLQNVCKSH+ +K+KV+LR LFHR Sbjct: 1 MGVKNLWDILESCKKTVPLHHLQNKRVCVDLSCWMVQLQNVCKSHACLKEKVHLRGLFHR 60 Query: 1523 LRALLALNCSLVLVADGSIPAIKLSTYRRRLGSGSEATRDEKKSHKL-SLPRNMGSEFSC 1347 LRAL+ALNC++V V+DGSIPAIKLSTYRRRL +G E + E K SL RN+GSEFSC Sbjct: 61 LRALIALNCTVVFVSDGSIPAIKLSTYRRRLNNGKEVAQKETNLQKTTSLRRNLGSEFSC 120 Query: 1346 MIKEAKVLGMALGIPCLDSIEEADAQCALLNSESMCDGCFTADSDVFLFGAKTIYRDIDL 1167 MI EAK+LGMALG+ CL+ IEEA+AQCALLNSES+CDGCF++DSD+FLFGA+T+YRDI L Sbjct: 121 MISEAKILGMALGVSCLNGIEEAEAQCALLNSESLCDGCFSSDSDIFLFGARTVYRDICL 180 Query: 1166 GDGGHVVCYEMVDIERKLGFGRNSLITLALLLGSDYSHGVHGFGPETACQIVRSFGDHNV 987 GDGG+VVCYEM DIERKLGFGR+SLI L+LLLGSDY GVHG GP++ACQIV+S GD V Sbjct: 181 GDGGYVVCYEMADIERKLGFGRDSLICLSLLLGSDYYPGVHGLGPDSACQIVKSIGDKFV 240 Query: 986 LRQVASEGFAFVKKTKGLKKQGEVRNCDANKENSLGYRQKNIDEKDMQKDHQFIKVIDAY 807 L++ ASEG +VKK KG +N +G +D ++VIDAY Sbjct: 241 LKKFASEGLGWVKKRKG-------------GQNKIG------------RDDTILQVIDAY 275 Query: 806 LKPKCHSPDSEMVHRVLVHHPFRRSELQKLCSQFFGWPSEKTDEYILPKISERDLRRFAI 627 LKPKCHS DSE + + L +PF+R++L +C+ F WPSE+TD YILP I+ERDLRRFA Sbjct: 276 LKPKCHSADSEFLLKALATYPFQRTKLHHICAVSFEWPSERTDGYILPCIAERDLRRFAN 335 Query: 626 LRSTSSEFGVQLPLQEIPVTCPISAIIKRRIVQGSKCFEVAWKEYDGLKSSVVPADLIEC 447 LR TSSE G+ LPL EIPV CP+S IIK R QG +C+EV+WK+ DGL++S+VPADLIE Sbjct: 336 LRLTSSELGLNLPLHEIPVKCPVSEIIKSRKAQGRECYEVSWKDMDGLETSIVPADLIES 395 Query: 446 ACPEKIVEFEE 414 ACPEKI EFEE Sbjct: 396 ACPEKISEFEE 406 Score = 61.2 bits (147), Expect = 8e-07 Identities = 30/60 (50%), Positives = 45/60 (75%), Gaps = 3/60 (5%) Frame = -2 Query: 221 VIDILSPSPCK---TSKLQKTIDPLVDVIYVSESETDTSPEYARKARELRLFIASIKTDV 51 VID+LSPSP K +SK + D +DVI +S+SE + SPE+ +KA+ELR+F+ASI+ ++ Sbjct: 511 VIDLLSPSPLKPSNSSKFHPSSDQNIDVINLSDSENEVSPEHKQKAKELRMFLASIRNEI 570