BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003430
         (1737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like...   651   0.0  
ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|2...   619   e-174
ref|XP_004140848.1| PREDICTED: flap endonuclease GEN-like 2-like...   588   e-165
ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like...   583   e-164
ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago...   582   e-163

>ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like [Vitis vinifera]
            gi|297741051|emb|CBI31782.3| unnamed protein product
            [Vitis vinifera]
          Length = 565

 Score =  651 bits (1680), Expect = 0.0
 Identities = 316/430 (73%), Positives = 369/430 (85%), Gaps = 1/430 (0%)
 Frame = -2

Query: 1703 MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVQLQNVCKSHSSIKDKVYLRSLFHR 1524
            MGVKNLWDILESCKKTLPL+HLQNKRVCIDLSCW+VQLQNV KSH+SIKDK+YL+ LFHR
Sbjct: 1    MGVKNLWDILESCKKTLPLYHLQNKRVCIDLSCWMVQLQNVNKSHASIKDKLYLKGLFHR 60

Query: 1523 LRALLALNCSLVLVADGSIPAIKLSTYRRRLGSGSEATRDEKKSHKL-SLPRNMGSEFSC 1347
            LRAL+ALNCSL+ V DGSIPAIKL+TYRRRL SG+E TRDE  SH + SL RNMGSEFSC
Sbjct: 61   LRALIALNCSLLFVTDGSIPAIKLATYRRRLNSGTEVTRDETNSHNVPSLRRNMGSEFSC 120

Query: 1346 MIKEAKVLGMALGIPCLDSIEEADAQCALLNSESMCDGCFTADSDVFLFGAKTIYRDIDL 1167
            MIKEAKVLG+ALGIPCLD IEEA+AQCALLNSES+CDGCFT+DSDVFLFGA+T+YRDI L
Sbjct: 121  MIKEAKVLGLALGIPCLDGIEEAEAQCALLNSESLCDGCFTSDSDVFLFGARTVYRDICL 180

Query: 1166 GDGGHVVCYEMVDIERKLGFGRNSLITLALLLGSDYSHGVHGFGPETACQIVRSFGDHNV 987
            G+GG+VVCYEM DIE  LGFGRNSLITLALLLGSDYS GVHGFGPE+ACQIV+S G+  V
Sbjct: 181  GEGGYVVCYEMADIESTLGFGRNSLITLALLLGSDYSQGVHGFGPESACQIVKSVGEEVV 240

Query: 986  LRQVASEGFAFVKKTKGLKKQGEVRNCDANKENSLGYRQKNIDEKDMQKDHQFIKVIDAY 807
            L+++A EG +F KK+KG +KQG+V  C+ +KEN   + + NI+  +     +F++VIDAY
Sbjct: 241  LKKIALEGISFAKKSKGSRKQGQVLKCN-DKENCSDH-EMNINGSEHSSQREFLRVIDAY 298

Query: 806  LKPKCHSPDSEMVHRVLVHHPFRRSELQKLCSQFFGWPSEKTDEYILPKISERDLRRFAI 627
            LKPKCHS DS+ VHR L   PF+R+E QK+C+Q F WP EKTDEYILPKI+ERDLRRFA 
Sbjct: 299  LKPKCHSADSDAVHRALALLPFQRTEAQKICAQLFEWPPEKTDEYILPKIAERDLRRFAN 358

Query: 626  LRSTSSEFGVQLPLQEIPVTCPISAIIKRRIVQGSKCFEVAWKEYDGLKSSVVPADLIEC 447
            LRSTSS  G+  PL EIPV CPIS IIK R VQG +CFEV+W+E+DGLKSS++PA+L++ 
Sbjct: 359  LRSTSSNLGIHFPLHEIPVKCPISGIIKHRKVQGRECFEVSWEEFDGLKSSIIPAELVKS 418

Query: 446  ACPEKIVEFE 417
            ACPEKIVEFE
Sbjct: 419  ACPEKIVEFE 428


>ref|XP_002322464.1| predicted protein [Populus trichocarpa] gi|222869460|gb|EEF06591.1|
            predicted protein [Populus trichocarpa]
          Length = 541

 Score =  619 bits (1595), Expect = e-174
 Identities = 336/568 (59%), Positives = 404/568 (71%), Gaps = 16/568 (2%)
 Frame = -2

Query: 1703 MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVQLQNVCKSHSS-IKDKVYLRSLFH 1527
            MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCW+VQLQNV K+H   +KDK Y+R+LFH
Sbjct: 1    MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWMVQLQNVNKTHCGLVKDKPYIRNLFH 60

Query: 1526 RLRALLALNCSLVLVADGSIPAIKLSTYRRRLGSGSEATRDEKKSHKL-SLPRNMGSEFS 1350
            RLRAL+ALNCSL+ VADGSIPAIKL+TYRRRL  G E T+DE  S K  SL RNMGSEFS
Sbjct: 61   RLRALIALNCSLIFVADGSIPAIKLATYRRRLNLGLEVTQDETNSQKACSLRRNMGSEFS 120

Query: 1349 CMIKEAKVLGMALGIPCLDSIEEADAQCALLNSESMCDGCFTADSDVFLFGAKTIYRDID 1170
            CMIKEAK +G+ALGIPCLDSIEEA+AQCALLN+ES+CDGCF++DSDVFLFGA+T+YRDI 
Sbjct: 121  CMIKEAKDIGLALGIPCLDSIEEAEAQCALLNTESLCDGCFSSDSDVFLFGARTVYRDIC 180

Query: 1169 LGDGGHVVCYEMVDIERKLGFGRNSLITLALLLGSDYSHGVHGFGPETACQIVRSFGDHN 990
            LG+G HVVCYEM ++ERKLGFGRNSLITLAL+LGSDYS GVHG GPE+ACQIV+S GD N
Sbjct: 181  LGEG-HVVCYEMEEVERKLGFGRNSLITLALILGSDYSPGVHGLGPESACQIVKSIGDSN 239

Query: 989  VLRQVASEGFAFVKKTKGLKKQGEVRNCDANKENSLGYRQKNIDEKDMQKDHQFIKVI-- 816
            VL+++ASEG  F KK K  KKQ       + K NSL        + ++  + +++     
Sbjct: 240  VLQKIASEGLPFAKKIKTSKKQMR-----SKKTNSL--------DSEIHFNGKYLLCCKT 286

Query: 815  ------DAYLKPKCHSPDSEMVHRVLVHHPFRRSELQKLCSQFFGWPSEKTDEYILPKIS 654
                  +A    K    DS+   RVL  HPF+R +LQ +C+QFFGWP EKTDEY LPKI+
Sbjct: 287  LKCLRQEAITIQKGRMTDSDAACRVLSQHPFQRLKLQGICAQFFGWPPEKTDEYTLPKIA 346

Query: 653  ERDLRRFAILRSTSSEFGVQLPLQEIPVTCPISAIIKRRIVQGSKCFEVAWKEYDGLKSS 474
            ERDLRRFA LRSTSSE GV LPLQ+IPV CP+S ++K+R VQG++CFEV W+ +DGLK+S
Sbjct: 347  ERDLRRFANLRSTSSELGVNLPLQKIPVKCPVSGVVKQRKVQGTECFEVLWEGFDGLKTS 406

Query: 473  VVPADLIECACPEKIVEFEE--XXXXXXXXXXXXXXXXXXTAAMXXXXXXXXXXXXXIES 300
            +VPADL+E ACPEKI EFEE                      AM             IE 
Sbjct: 407  IVPADLLESACPEKIAEFEEKTALGKKQNQRKPGSKKSGNRLAMAEIDLKLQTLLLDIEP 466

Query: 299  ENNAVSGSTPRRGAHTELPIGKALPEVIDILSPSPC----KTSKLQKTIDPLVDVIYVSE 132
             +N    ++ +              EVID+ SPSP       S+ Q+  D   +VI +SE
Sbjct: 467  GSNTACSTSFQY-------------EVIDLCSPSPVARTRTVSRCQRVNDQHSEVIDLSE 513

Query: 131  SETDTSPEYARKARELRLFIASIKTDVS 48
            SE + SPE+ARKAR LR+FIASI+ D+S
Sbjct: 514  SENEMSPEHARKARALRMFIASIRDDMS 541


>ref|XP_004140848.1| PREDICTED: flap endonuclease GEN-like 2-like [Cucumis sativus]
          Length = 563

 Score =  588 bits (1517), Expect = e-165
 Identities = 321/578 (55%), Positives = 388/578 (67%), Gaps = 30/578 (5%)
 Frame = -2

Query: 1703 MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVQLQNVCKSHSSIKDKVYLRSLFHR 1524
            MGVKNLWDILESCKKTLPLH LQNKR+CIDLSCWIV+L +V KSH     K YL+ LF+R
Sbjct: 1    MGVKNLWDILESCKKTLPLHRLQNKRLCIDLSCWIVELSSVSKSHCHSNSKFYLKGLFYR 60

Query: 1523 LRALLALNCSLVLVADGSIPAIKLSTYRRRLGSGSEATRDEKKSHKL-SLPRNMGSEFSC 1347
            LR L+ALNCSL+ V DGSIP IKLSTYRRRL +G+E  + +    ++ SL RN GSEFS 
Sbjct: 61   LRTLIALNCSLIFVTDGSIPGIKLSTYRRRLNNGNEVAQTDANPQQICSLKRNKGSEFSL 120

Query: 1346 MIKEAKVLGMALGIPCLDSIEEADAQCALLNSESMCDGCFTADSDVFLFGAKTIYRDIDL 1167
            MIKEA+ LG+ALGIPCLD++EEA+AQCALLNSE +CDGCFT+DSD FLFGA+T+YRDI L
Sbjct: 121  MIKEAQALGLALGIPCLDAVEEAEAQCALLNSELLCDGCFTSDSDAFLFGARTVYRDICL 180

Query: 1166 GDGGHVVCYEMVDIERKLGFGRNSLITLALLLGSDYSHGVHGFGPETACQIVRSFGDHNV 987
            GD GHVVCYEM DIE +LGFGRNS+IT ALLLGSDYS GV+G G E+ACQ+V++ GD  V
Sbjct: 181  GDSGHVVCYEMDDIETRLGFGRNSMITFALLLGSDYSQGVYGMGRESACQLVKAVGDGAV 240

Query: 986  LRQVASEGFAFVKKTKGLKKQGEVRNCDANKENSLGYRQKNIDEKDMQKDHQFIKVIDAY 807
            L+++ SEG A  KK +  KKQG  ++   +                M K  +F +VIDAY
Sbjct: 241  LQKITSEGLALAKKGENSKKQGLPKSGHGHY---------------MLKCDEFSEVIDAY 285

Query: 806  LKPKCHSPDSEMVHRVLVHHPFRRSELQKLCSQFFGWPSEKTDEYILPKISERDLRRFAI 627
            LKPKCHS DSE V RVL  HPF+  +LQ++C++FF W  EKTDE ILPKI+ERDLRRFA 
Sbjct: 286  LKPKCHSADSEAVTRVLDQHPFQHVKLQQICAEFFEWSPEKTDENILPKIAERDLRRFAN 345

Query: 626  LRSTSSEFGVQLPLQEIPVTCPISAIIKRRIVQGSKCFEVAWKEYDGLKSSVVPADLIEC 447
            +RS +SE G  +PLQEIPV+CPIS I+K R VQG++C+EV+WK   GL  SVV ADL++ 
Sbjct: 346  IRSRTSELGFNIPLQEIPVSCPISGIVKHRKVQGNECYEVSWKNI-GLNLSVVSADLLQR 404

Query: 446  ACPEKIVEFEEXXXXXXXXXXXXXXXXXXTAAMXXXXXXXXXXXXXIESENNAV------ 285
            ACPE I+EFEE                   A M             IESE+  V      
Sbjct: 405  ACPEMIIEFEEKRADGKKQNKGKTKTKKSAAVMAEIDKRLKTLLLEIESESRVVHNISHV 464

Query: 284  --SGSTPRRGAHTEL---------PI--------GKALPEVIDILSPSPC----KTSKLQ 174
                 T   G H EL         PI             EVID+LSPSP       SK Q
Sbjct: 465  PIDSKTSGTGVH-ELNQEVFLNIEPIIVDHARSCSTKRIEVIDLLSPSPAIQTRNVSKFQ 523

Query: 173  KTIDPLVDVIYVSESETDTSPEYARKARELRLFIASIK 60
            +     +DVI +S++E D SPE+ RKARELR F+AS+K
Sbjct: 524  QKTSQKIDVIDLSDTEIDQSPEHERKARELRSFLASLK 561


>ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like [Glycine max]
          Length = 588

 Score =  583 bits (1502), Expect = e-164
 Identities = 286/433 (66%), Positives = 348/433 (80%), Gaps = 3/433 (0%)
 Frame = -2

Query: 1703 MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVQLQNVCKSHSSIKDKVYLRSLFHR 1524
            MGVKNLWD+LESCKKT+PLHHLQNKRVC+DLSCW+VQL +V KSH+ +K+KVYLR LFHR
Sbjct: 1    MGVKNLWDVLESCKKTVPLHHLQNKRVCVDLSCWMVQLHSVSKSHACVKEKVYLRGLFHR 60

Query: 1523 LRALLALNCSLVLVADGSIPAIKLSTYRRRLGSGSE---ATRDEKKSHKLSLPRNMGSEF 1353
            LRAL+ALNCSL+ V+DG+IPAIKLSTYRRRL  G E   A  +       SL RNMGSEF
Sbjct: 61   LRALIALNCSLIFVSDGAIPAIKLSTYRRRLNVGKEVQVAQNETNLQKATSLQRNMGSEF 120

Query: 1352 SCMIKEAKVLGMALGIPCLDSIEEADAQCALLNSESMCDGCFTADSDVFLFGAKTIYRDI 1173
            SCMIKEAKVLGMALGI CL+ IEEA+AQCALLN ES+CDGCF++DSD+FLFGA+T+YRDI
Sbjct: 121  SCMIKEAKVLGMALGISCLNGIEEAEAQCALLNFESLCDGCFSSDSDIFLFGARTVYRDI 180

Query: 1172 DLGDGGHVVCYEMVDIERKLGFGRNSLITLALLLGSDYSHGVHGFGPETACQIVRSFGDH 993
             LGDGG+VVCYEM DIERKLGFGR+SLI L+LLLGSDY  GVHG GPE+ACQIV+S GD 
Sbjct: 181  CLGDGGYVVCYEMTDIERKLGFGRDSLIALSLLLGSDYYQGVHGLGPESACQIVKSIGDK 240

Query: 992  NVLRQVASEGFAFVKKTKGLKKQGEVRNCDANKENSLGYRQKNIDEKDMQKDHQFIKVID 813
             +L++ ASEG  +VKK KG+     + + +      + Y  KN    D++ D   ++VI+
Sbjct: 241  YILKKFASEGLGWVKKRKGIP---SILHSNLIILILILYSCKN----DLRPDDNILQVIN 293

Query: 812  AYLKPKCHSPDSEMVHRVLVHHPFRRSELQKLCSQFFGWPSEKTDEYILPKISERDLRRF 633
            AY+KPKCH  DS++VH+ L  +PF+R++LQ++C  FF WPSEKTD YILP I+ER+LRRF
Sbjct: 294  AYMKPKCHQADSDIVHKALAQYPFQRTKLQQICVGFFEWPSEKTDGYILPNIAERNLRRF 353

Query: 632  AILRSTSSEFGVQLPLQEIPVTCPISAIIKRRIVQGSKCFEVAWKEYDGLKSSVVPADLI 453
            A LR TSSE G+ LPL EIPV CP+S IIK R VQG +C+EV+W+  DGL++S+VPADLI
Sbjct: 354  ANLRLTSSEVGLNLPLHEIPVKCPVSEIIKSRRVQGRECYEVSWEGMDGLETSIVPADLI 413

Query: 452  ECACPEKIVEFEE 414
            E AC EKI+EFEE
Sbjct: 414  ESACREKILEFEE 426



 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 31/62 (50%), Positives = 45/62 (72%), Gaps = 4/62 (6%)
 Frame = -2

Query: 224 EVIDILSPSPCKTSKL----QKTIDPLVDVIYVSESETDTSPEYARKARELRLFIASIKT 57
           E+ID+LSPSP K S L    Q++ D  ++VI +S+SE D S E  +KA+ELRLF+ASI+ 
Sbjct: 526 EIIDLLSPSPPKKSNLFSKCQQSSDQHIEVINLSDSENDMSVERKQKAKELRLFLASIRN 585

Query: 56  DV 51
           ++
Sbjct: 586 EI 587


>ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago truncatula]
            gi|355494502|gb|AES75705.1| Flap endonuclease GEN-like
            protein [Medicago truncatula]
          Length = 571

 Score =  582 bits (1500), Expect = e-163
 Identities = 286/431 (66%), Positives = 343/431 (79%), Gaps = 1/431 (0%)
 Frame = -2

Query: 1703 MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVQLQNVCKSHSSIKDKVYLRSLFHR 1524
            MGVKNLWDILESCKKT+PLHHLQNKRVC+DLSCW+VQLQNVCKSH+ +K+KV+LR LFHR
Sbjct: 1    MGVKNLWDILESCKKTVPLHHLQNKRVCVDLSCWMVQLQNVCKSHACLKEKVHLRGLFHR 60

Query: 1523 LRALLALNCSLVLVADGSIPAIKLSTYRRRLGSGSEATRDEKKSHKL-SLPRNMGSEFSC 1347
            LRAL+ALNC++V V+DGSIPAIKLSTYRRRL +G E  + E    K  SL RN+GSEFSC
Sbjct: 61   LRALIALNCTVVFVSDGSIPAIKLSTYRRRLNNGKEVAQKETNLQKTTSLRRNLGSEFSC 120

Query: 1346 MIKEAKVLGMALGIPCLDSIEEADAQCALLNSESMCDGCFTADSDVFLFGAKTIYRDIDL 1167
            MI EAK+LGMALG+ CL+ IEEA+AQCALLNSES+CDGCF++DSD+FLFGA+T+YRDI L
Sbjct: 121  MISEAKILGMALGVSCLNGIEEAEAQCALLNSESLCDGCFSSDSDIFLFGARTVYRDICL 180

Query: 1166 GDGGHVVCYEMVDIERKLGFGRNSLITLALLLGSDYSHGVHGFGPETACQIVRSFGDHNV 987
            GDGG+VVCYEM DIERKLGFGR+SLI L+LLLGSDY  GVHG GP++ACQIV+S GD  V
Sbjct: 181  GDGGYVVCYEMADIERKLGFGRDSLICLSLLLGSDYYPGVHGLGPDSACQIVKSIGDKFV 240

Query: 986  LRQVASEGFAFVKKTKGLKKQGEVRNCDANKENSLGYRQKNIDEKDMQKDHQFIKVIDAY 807
            L++ ASEG  +VKK KG              +N +G            +D   ++VIDAY
Sbjct: 241  LKKFASEGLGWVKKRKG-------------GQNKIG------------RDDTILQVIDAY 275

Query: 806  LKPKCHSPDSEMVHRVLVHHPFRRSELQKLCSQFFGWPSEKTDEYILPKISERDLRRFAI 627
            LKPKCHS DSE + + L  +PF+R++L  +C+  F WPSE+TD YILP I+ERDLRRFA 
Sbjct: 276  LKPKCHSADSEFLLKALATYPFQRTKLHHICAVSFEWPSERTDGYILPCIAERDLRRFAN 335

Query: 626  LRSTSSEFGVQLPLQEIPVTCPISAIIKRRIVQGSKCFEVAWKEYDGLKSSVVPADLIEC 447
            LR TSSE G+ LPL EIPV CP+S IIK R  QG +C+EV+WK+ DGL++S+VPADLIE 
Sbjct: 336  LRLTSSELGLNLPLHEIPVKCPVSEIIKSRKAQGRECYEVSWKDMDGLETSIVPADLIES 395

Query: 446  ACPEKIVEFEE 414
            ACPEKI EFEE
Sbjct: 396  ACPEKISEFEE 406



 Score = 61.2 bits (147), Expect = 8e-07
 Identities = 30/60 (50%), Positives = 45/60 (75%), Gaps = 3/60 (5%)
 Frame = -2

Query: 221 VIDILSPSPCK---TSKLQKTIDPLVDVIYVSESETDTSPEYARKARELRLFIASIKTDV 51
           VID+LSPSP K   +SK   + D  +DVI +S+SE + SPE+ +KA+ELR+F+ASI+ ++
Sbjct: 511 VIDLLSPSPLKPSNSSKFHPSSDQNIDVINLSDSENEVSPEHKQKAKELRMFLASIRNEI 570