BLASTX nr result

ID: Coptis21_contig00003426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003426
         (1722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320851.1| predicted protein [Populus trichocarpa] gi|2...   603   e-170
ref|XP_002273414.1| PREDICTED: mitochondrial substrate carrier f...   603   e-170
ref|XP_002509930.1| Grave disease carrier protein, putative [Ric...   600   e-169
ref|XP_004133837.1| PREDICTED: mitochondrial substrate carrier f...   597   e-168
ref|XP_002532663.1| Grave disease carrier protein, putative [Ric...   596   e-168

>ref|XP_002320851.1| predicted protein [Populus trichocarpa] gi|222861624|gb|EEE99166.1|
            predicted protein [Populus trichocarpa]
          Length = 354

 Score =  603 bits (1554), Expect = e-170
 Identities = 307/355 (86%), Positives = 326/355 (91%), Gaps = 4/355 (1%)
 Frame = -1

Query: 1455 MASED----ESAVSKIVVNLAEEAKLAREGVKAPGHAIFSICKSLVAGGVAGGLSRTAVA 1288
            MASED    ESAV+ IV NLAEEAKLAREGVKAP HAI SICKSLVAGGVAGG+SRTAVA
Sbjct: 1    MASEDVKTSESAVTTIV-NLAEEAKLAREGVKAPSHAILSICKSLVAGGVAGGVSRTAVA 59

Query: 1287 PLERLKILLQVQNPHSIKYNGTIQGLKYIWRSEGFRGLFKGNGTNCARIVPNSAVKFFSY 1108
            PLERLKILLQVQNPH+IKYNGTIQGLKYIWR+EGFRGLFKGNGTNCARIVPNSAVKFFSY
Sbjct: 60   PLERLKILLQVQNPHNIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSY 119

Query: 1107 EEASRGILWLYRQQPGNEDASLTPLLRLGAGACAGIIAMSATYPLDMVRGRLTVQTEKSP 928
            E+ASRGIL LY+QQ GNEDA LTPLLRLGAGACAGIIAMSATYP+DMVRGRLTVQT+KSP
Sbjct: 120  EQASRGILSLYQQQTGNEDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTDKSP 179

Query: 927  YQYRGMFHALSTVLREEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLIKSRPFGLV 748
            YQYRGMFHALSTVLR+EGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWL+K+RPFGLV
Sbjct: 180  YQYRGMFHALSTVLRQEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLVKARPFGLV 239

Query: 747  QDTELSVPTRLXXXXXXXXXXXXXAYPLDVIRRRMQMVGWNNASSVLTGDGRSKAPLEYT 568
            +D+ELSV TRL             AYPLDVIRRRMQMVGW +A+S++TGDGRSKAPLEY 
Sbjct: 240  EDSELSVTTRLACGAAAGTIGQTVAYPLDVIRRRMQMVGWKDAASIVTGDGRSKAPLEYN 299

Query: 567  GMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYETVKDILGVEMRISD 403
            GMID FRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYE VKD+LGVE+RISD
Sbjct: 300  GMIDTFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDVLGVEIRISD 354


>ref|XP_002273414.1| PREDICTED: mitochondrial substrate carrier family protein B [Vitis
            vinifera] gi|297742308|emb|CBI34457.3| unnamed protein
            product [Vitis vinifera]
          Length = 354

 Score =  603 bits (1554), Expect = e-170
 Identities = 304/355 (85%), Positives = 327/355 (92%), Gaps = 4/355 (1%)
 Frame = -1

Query: 1455 MASED----ESAVSKIVVNLAEEAKLAREGVKAPGHAIFSICKSLVAGGVAGGLSRTAVA 1288
            MASED    E+AVS+IV NLAEEAKLAREGVKAP HA+ S+CKSLVAGGVAGG+SRTAVA
Sbjct: 1    MASEDVKTSEAAVSRIV-NLAEEAKLAREGVKAPSHALLSVCKSLVAGGVAGGVSRTAVA 59

Query: 1287 PLERLKILLQVQNPHSIKYNGTIQGLKYIWRSEGFRGLFKGNGTNCARIVPNSAVKFFSY 1108
            PLERLKILLQVQNPH+IKYNGTIQGLKYIW+SEGFRGLFKGNGTNCARIVPNSAVKF+SY
Sbjct: 60   PLERLKILLQVQNPHTIKYNGTIQGLKYIWKSEGFRGLFKGNGTNCARIVPNSAVKFYSY 119

Query: 1107 EEASRGILWLYRQQPGNEDASLTPLLRLGAGACAGIIAMSATYPLDMVRGRLTVQTEKSP 928
            E+AS+GILWLYRQQPGNE+A LTPLLRLGAGACAGIIAMSATYP+DMVRGRLTVQTEKSP
Sbjct: 120  EQASKGILWLYRQQPGNENAELTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEKSP 179

Query: 927  YQYRGMFHALSTVLREEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLIKSRPFGLV 748
             QYRG+FHALSTVLREEG RALYKGWLPSVIGV+PYVGLNFAVYESLKDWL+K++PFGLV
Sbjct: 180  RQYRGIFHALSTVLREEGARALYKGWLPSVIGVIPYVGLNFAVYESLKDWLMKAKPFGLV 239

Query: 747  QDTELSVPTRLXXXXXXXXXXXXXAYPLDVIRRRMQMVGWNNASSVLTGDGRSKAPLEYT 568
            +D+EL V TRL             AYPLDVIRRRMQMVGW +A+SV+TGDGR KAPLEYT
Sbjct: 240  EDSELGVTTRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWKDAASVVTGDGRGKAPLEYT 299

Query: 567  GMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYETVKDILGVEMRISD 403
            GM+DAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYE VKDILGVEMRISD
Sbjct: 300  GMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEMRISD 354


>ref|XP_002509930.1| Grave disease carrier protein, putative [Ricinus communis]
            gi|223549829|gb|EEF51317.1| Grave disease carrier
            protein, putative [Ricinus communis]
          Length = 355

 Score =  600 bits (1548), Expect = e-169
 Identities = 302/356 (84%), Positives = 326/356 (91%), Gaps = 5/356 (1%)
 Frame = -1

Query: 1455 MASED-----ESAVSKIVVNLAEEAKLAREGVKAPGHAIFSICKSLVAGGVAGGLSRTAV 1291
            MASED     E+AVSKIV NLAEEAKLARE +KAP HA+FSICKSL+AGGVAGG+SRTAV
Sbjct: 1    MASEDVKTRSEAAVSKIV-NLAEEAKLAREEIKAPSHALFSICKSLIAGGVAGGVSRTAV 59

Query: 1290 APLERLKILLQVQNPHSIKYNGTIQGLKYIWRSEGFRGLFKGNGTNCARIVPNSAVKFFS 1111
            APLERLKILLQVQNPHSIKYNGTIQGLKYIWR+EGFRGLFKGNGTNCARIVPNSAVKFFS
Sbjct: 60   APLERLKILLQVQNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFS 119

Query: 1110 YEEASRGILWLYRQQPGNEDASLTPLLRLGAGACAGIIAMSATYPLDMVRGRLTVQTEKS 931
            YEEAS+GILW+YRQQ GN+DA LTPLLRLGAGACAGIIAMSATYP+DMVRGRLTVQTE S
Sbjct: 120  YEEASKGILWMYRQQTGNDDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEAS 179

Query: 930  PYQYRGMFHALSTVLREEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLIKSRPFGL 751
            P QY+G+FHALSTVL+EEGPRALY+GWLPSVIGVVPYVGLNFAVYESLKDWL+KS+PFGL
Sbjct: 180  PRQYKGIFHALSTVLKEEGPRALYRGWLPSVIGVVPYVGLNFAVYESLKDWLLKSKPFGL 239

Query: 750  VQDTELSVPTRLXXXXXXXXXXXXXAYPLDVIRRRMQMVGWNNASSVLTGDGRSKAPLEY 571
            VQD EL V TRL             AYPLDVIRRRMQMVGW +A+SV+TGDG++KAPLEY
Sbjct: 240  VQDNELGVATRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWKDAASVITGDGKTKAPLEY 299

Query: 570  TGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYETVKDILGVEMRISD 403
            TGM+DAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYE VKD+LGVE+RISD
Sbjct: 300  TGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYELVKDVLGVEVRISD 355


>ref|XP_004133837.1| PREDICTED: mitochondrial substrate carrier family protein B-like
            [Cucumis sativus] gi|449480266|ref|XP_004155845.1|
            PREDICTED: mitochondrial substrate carrier family protein
            B-like [Cucumis sativus]
          Length = 354

 Score =  597 bits (1540), Expect = e-168
 Identities = 305/355 (85%), Positives = 326/355 (91%), Gaps = 4/355 (1%)
 Frame = -1

Query: 1455 MASED----ESAVSKIVVNLAEEAKLAREGVKAPGHAIFSICKSLVAGGVAGGLSRTAVA 1288
            MASED    ESAVS IV NLAEEAKLAREGVKAP +A+ SICKSLVAGGVAGG+SRTAVA
Sbjct: 1    MASEDVKRSESAVSTIV-NLAEEAKLAREGVKAPSYAVLSICKSLVAGGVAGGVSRTAVA 59

Query: 1287 PLERLKILLQVQNPHSIKYNGTIQGLKYIWRSEGFRGLFKGNGTNCARIVPNSAVKFFSY 1108
            PLERLKILLQVQNPHSIKYNGTIQGLKYIWR+EGFRGLFKGNGTNCARIVPNSAVKFFSY
Sbjct: 60   PLERLKILLQVQNPHSIKYNGTIQGLKYIWRTEGFRGLFKGNGTNCARIVPNSAVKFFSY 119

Query: 1107 EEASRGILWLYRQQPGNEDASLTPLLRLGAGACAGIIAMSATYPLDMVRGRLTVQTEKSP 928
            E+ASRGIL+ YR+Q G++DA LTPLLRLGAGACAGIIAMSATYP+DMVRGRLTVQT+KSP
Sbjct: 120  EQASRGILYFYREQTGDQDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTDKSP 179

Query: 927  YQYRGMFHALSTVLREEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLIKSRPFGLV 748
            YQYRG+FHALSTVLREEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLIK++PFGLV
Sbjct: 180  YQYRGIFHALSTVLREEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLIKNKPFGLV 239

Query: 747  QDTELSVPTRLXXXXXXXXXXXXXAYPLDVIRRRMQMVGWNNASSVLTGDGRSKAPLEYT 568
             D+ELSV TRL             AYPLDVIRRRMQMVGWNNA+SV+TGDGRSKA LEYT
Sbjct: 240  DDSELSVTTRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWNNAASVVTGDGRSKASLEYT 299

Query: 567  GMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYETVKDILGVEMRISD 403
            GM+DAFRKTVR+EGF ALYKGLVPNSVKVVPSIAIAFVTYE VKD+LGVE+RISD
Sbjct: 300  GMVDAFRKTVRYEGFRALYKGLVPNSVKVVPSIAIAFVTYEMVKDVLGVEIRISD 354


>ref|XP_002532663.1| Grave disease carrier protein, putative [Ricinus communis]
            gi|223527623|gb|EEF29736.1| Grave disease carrier
            protein, putative [Ricinus communis]
          Length = 354

 Score =  596 bits (1537), Expect = e-168
 Identities = 303/355 (85%), Positives = 327/355 (92%), Gaps = 4/355 (1%)
 Frame = -1

Query: 1455 MASED----ESAVSKIVVNLAEEAKLAREGVKAPGHAIFSICKSLVAGGVAGGLSRTAVA 1288
            MASED    ESAV+ IV NLAEEAKLAREGVKAP +A+ SICKSLVAGGVAGG+SRTAVA
Sbjct: 1    MASEDVKTTESAVTTIV-NLAEEAKLAREGVKAPSYAVLSICKSLVAGGVAGGVSRTAVA 59

Query: 1287 PLERLKILLQVQNPHSIKYNGTIQGLKYIWRSEGFRGLFKGNGTNCARIVPNSAVKFFSY 1108
            PLERLKILLQVQNPH+IKYNGTIQGL+YIW++EGFRGLFKGNGTNCARIVPNSAVKFFSY
Sbjct: 60   PLERLKILLQVQNPHNIKYNGTIQGLRYIWKTEGFRGLFKGNGTNCARIVPNSAVKFFSY 119

Query: 1107 EEASRGILWLYRQQPGNEDASLTPLLRLGAGACAGIIAMSATYPLDMVRGRLTVQTEKSP 928
            EEAS+GIL+LYRQQ GNEDA LTPLLRLGAGACAGIIAMSATYP+DMVRGRLTVQT+KSP
Sbjct: 120  EEASKGILYLYRQQTGNEDAQLTPLLRLGAGACAGIIAMSATYPMDMVRGRLTVQTDKSP 179

Query: 927  YQYRGMFHALSTVLREEGPRALYKGWLPSVIGVVPYVGLNFAVYESLKDWLIKSRPFGLV 748
            YQYRGMFHALSTVLREEGPRALYKGWLPSVIGV+PYVGLNFAVYESLK+WLIK++PFGLV
Sbjct: 180  YQYRGMFHALSTVLREEGPRALYKGWLPSVIGVIPYVGLNFAVYESLKEWLIKAKPFGLV 239

Query: 747  QDTELSVPTRLXXXXXXXXXXXXXAYPLDVIRRRMQMVGWNNASSVLTGDGRSKAPLEYT 568
            QD++LSV TRL             AYPLDVIRRRMQMVGW +ASS++ GDGRSK+ LEYT
Sbjct: 240  QDSDLSVTTRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWKDASSIVIGDGRSKSSLEYT 299

Query: 567  GMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYETVKDILGVEMRISD 403
            GMIDAFRKTVR+EGFGALYKGLVPNSVKVVPSIAIAFVTYE VKDILGVE+RISD
Sbjct: 300  GMIDAFRKTVRYEGFGALYKGLVPNSVKVVPSIAIAFVTYEVVKDILGVEIRISD 354


Top