BLASTX nr result

ID: Coptis21_contig00003424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003424
         (1187 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_193037.1| putative quinone-oxidoreductase-like protein [A...   465   e-129
ref|XP_002863281.1| oxidoreductase [Arabidopsis lyrata subsp. ly...   464   e-128
ref|XP_002300061.1| predicted protein [Populus trichocarpa] gi|2...   464   e-128
dbj|BAJ34603.1| unnamed protein product [Thellungiella halophila]     459   e-127
gb|ABK96194.1| unknown [Populus trichocarpa]                          459   e-127

>ref|NP_193037.1| putative quinone-oxidoreductase-like protein [Arabidopsis thaliana]
            gi|67460977|sp|Q9SV68.1|QORH_ARATH RecName: Full=Putative
            quinone-oxidoreductase homolog, chloroplastic
            gi|15724256|gb|AAL06521.1|AF412068_1 AT4g13010/F25G13_100
            [Arabidopsis thaliana] gi|5123942|emb|CAB45500.1|
            putative protein [Arabidopsis thaliana]
            gi|7268003|emb|CAB78343.1| putative protein [Arabidopsis
            thaliana] gi|15028001|gb|AAK76531.1| unknown protein
            [Arabidopsis thaliana] gi|15912237|gb|AAL08252.1|
            AT4g13010/F25G13_100 [Arabidopsis thaliana]
            gi|21436057|gb|AAM51229.1| unknown protein [Arabidopsis
            thaliana] gi|332657813|gb|AEE83213.1| putative
            quinone-oxidoreductase-like protein [Arabidopsis
            thaliana]
          Length = 329

 Score =  465 bits (1197), Expect = e-129
 Identities = 231/328 (70%), Positives = 267/328 (81%)
 Frame = -1

Query: 1136 MAGKLMHAVRFDCFGGGVAGXXXXXXXXXXXXXXXXXLRLDATSLNPIDWKIQEGQLRLI 957
            MAGKLMHA++++ +GGG AG                 L+L+ATSLNP+DWKIQ+G +R  
Sbjct: 1    MAGKLMHALQYNSYGGGAAGLEHVQVPVPTPKSNEVCLKLEATSLNPVDWKIQKGMIRPF 60

Query: 956  LPRKFPYIPATDVSGEVVEVSADVKKFRVGDKVVAMLRHSTGGGLAEFAVAPESLTVKRP 777
            LPRKFP IPATDV+GEVVEV + VK F+ GDKVVA+L H  GGGLAEFAVA E LTVKRP
Sbjct: 61   LPRKFPCIPATDVAGEVVEVGSGVKNFKAGDKVVAVLSHLGGGGLAEFAVATEKLTVKRP 120

Query: 776  PEVSAVEAAGLPVAALSAHQALTKYAGIKLDGSGKTTNVLITAASGGVGHYAVQLAKLGN 597
             EV A EAA LPVA L+A QALT  AG+KLDG+GK  N+L+TAASGGVGHYAVQLAKL N
Sbjct: 121  QEVGAAEAAALPVAGLTALQALTNPAGLKLDGTGKKANILVTAASGGVGHYAVQLAKLAN 180

Query: 596  THVTATCGARNINFVKSLGADEVLDYKTPEGAALKSPSGRKYDAVIHCALGIPWSTFEPN 417
             HVTATCGARNI FVKSLGADEVLDYKTPEGAALKSPSG+KYDAV+HCA GIP+S FEPN
Sbjct: 181  AHVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVVHCANGIPFSVFEPN 240

Query: 416  LSECGKLIDLTPGPRALMTYVFNKVTFVKKQLVPMVLIPKAEDLEYMLRLVKDGKLKTVV 237
            LSE GK+ID+TPGP A+ TY   K+T  KKQLVP++LIPKAE+LE+M+ LVK+GK+KTV+
Sbjct: 241  LSENGKVIDITPGPNAMWTYAVKKITMSKKQLVPLLLIPKAENLEFMVNLVKEGKVKTVI 300

Query: 236  DSKHPLSNVEEAWLKGIAGHATGKLIVE 153
            DSKHPLS  E+AW K I GHATGK+IVE
Sbjct: 301  DSKHPLSKAEDAWAKSIDGHATGKIIVE 328


>ref|XP_002863281.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
            gi|297309115|gb|EFH39540.1| oxidoreductase [Arabidopsis
            lyrata subsp. lyrata]
          Length = 329

 Score =  464 bits (1195), Expect = e-128
 Identities = 231/328 (70%), Positives = 267/328 (81%)
 Frame = -1

Query: 1136 MAGKLMHAVRFDCFGGGVAGXXXXXXXXXXXXXXXXXLRLDATSLNPIDWKIQEGQLRLI 957
            MAGKLMHA+++D +GGG A                  L+L+ATSLNP+DWKIQ+G +R  
Sbjct: 1    MAGKLMHALQYDSYGGGAAALKHVQVPVPTPKSNEVCLKLEATSLNPVDWKIQKGMIRPF 60

Query: 956  LPRKFPYIPATDVSGEVVEVSADVKKFRVGDKVVAMLRHSTGGGLAEFAVAPESLTVKRP 777
            LPRKFP IPATDV+GEVVEV + VK F+ GDKVVA+L H  GGGLAEFAVA E LTVKRP
Sbjct: 61   LPRKFPCIPATDVAGEVVEVGSGVKNFKAGDKVVAVLSHLGGGGLAEFAVASEKLTVKRP 120

Query: 776  PEVSAVEAAGLPVAALSAHQALTKYAGIKLDGSGKTTNVLITAASGGVGHYAVQLAKLGN 597
             EV A EAA LPVA L+A QALT  AG+KLDG+GK  N+L+TAASGGVGHYAVQLAKL N
Sbjct: 121  QEVGAAEAAALPVAGLTALQALTNPAGLKLDGTGKKANILVTAASGGVGHYAVQLAKLAN 180

Query: 596  THVTATCGARNINFVKSLGADEVLDYKTPEGAALKSPSGRKYDAVIHCALGIPWSTFEPN 417
             HVTATCGARNI+FVKSLGADEVLDYKTPEGA LKSPSG+KYDAV+HCA GIP+STFEPN
Sbjct: 181  AHVTATCGARNIDFVKSLGADEVLDYKTPEGATLKSPSGKKYDAVVHCANGIPFSTFEPN 240

Query: 416  LSECGKLIDLTPGPRALMTYVFNKVTFVKKQLVPMVLIPKAEDLEYMLRLVKDGKLKTVV 237
            LSE GK+ID+TPGP A+ TY   KVT  KKQLVP++LIPKAE+LE+M+ L+K+GK+KTV+
Sbjct: 241  LSENGKVIDITPGPSAMWTYAVKKVTMSKKQLVPLLLIPKAENLEFMVNLLKEGKVKTVI 300

Query: 236  DSKHPLSNVEEAWLKGIAGHATGKLIVE 153
            DSKHPLS  E+AW K I GHATGK+IVE
Sbjct: 301  DSKHPLSKAEDAWAKSIDGHATGKIIVE 328


>ref|XP_002300061.1| predicted protein [Populus trichocarpa] gi|222847319|gb|EEE84866.1|
            predicted protein [Populus trichocarpa]
          Length = 335

 Score =  464 bits (1193), Expect = e-128
 Identities = 233/334 (69%), Positives = 266/334 (79%), Gaps = 6/334 (1%)
 Frame = -1

Query: 1136 MAGKLMHAVRFDCFGGGVAGXXXXXXXXXXXXXXXXXLRLDATSLNPIDWKIQEGQLRLI 957
            MAGKLMHAV++  +GGG AG                 L+L+ATSLNP+DWK+Q+G LR +
Sbjct: 1    MAGKLMHAVQYSTYGGGAAGLKHVEVPVPSAKRDEVLLKLEATSLNPVDWKMQKGLLRPL 60

Query: 956  LPRKFPYIPAT------DVSGEVVEVSADVKKFRVGDKVVAMLRHSTGGGLAEFAVAPES 795
            LPR+FPYIP T      DV+GEVVEV   V  F+ GDKVVA+L H +GGGLAEF VA +S
Sbjct: 61   LPRRFPYIPETFVATGADVAGEVVEVGPGVTNFKTGDKVVAILSHISGGGLAEFVVAKKS 120

Query: 794  LTVKRPPEVSAVEAAGLPVAALSAHQALTKYAGIKLDGSGKTTNVLITAASGGVGHYAVQ 615
            L V RPPEVSA E AGLPVA L+AHQA+T+ AG+KLDGSG   N+LITAASGGVGHYAVQ
Sbjct: 121  LPVARPPEVSAAEGAGLPVAGLTAHQAVTQSAGVKLDGSGNQKNILITAASGGVGHYAVQ 180

Query: 614  LAKLGNTHVTATCGARNINFVKSLGADEVLDYKTPEGAALKSPSGRKYDAVIHCALGIPW 435
            LAKLGNTHVTATCGARNI FVKSLGADEVLDYKTPEGAALKSPSG+KYDAVIHCA GIPW
Sbjct: 181  LAKLGNTHVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVIHCAAGIPW 240

Query: 434  STFEPNLSECGKLIDLTPGPRALMTYVFNKVTFVKKQLVPMVLIPKAEDLEYMLRLVKDG 255
            STFEPNLS  GK+ID+TPGP A M   F K+TF KKQLVP++LIP  E+L Y++ LVK+G
Sbjct: 241  STFEPNLSANGKVIDITPGPSAFMASAFKKLTFSKKQLVPLLLIPNGENLNYLVNLVKEG 300

Query: 254  KLKTVVDSKHPLSNVEEAWLKGIAGHATGKLIVE 153
            KLKTV+DSKHPLS  E+AW K I GHATGK+IVE
Sbjct: 301  KLKTVIDSKHPLSRAEDAWAKIIDGHATGKIIVE 334


>dbj|BAJ34603.1| unnamed protein product [Thellungiella halophila]
          Length = 329

 Score =  459 bits (1182), Expect = e-127
 Identities = 227/328 (69%), Positives = 267/328 (81%)
 Frame = -1

Query: 1136 MAGKLMHAVRFDCFGGGVAGXXXXXXXXXXXXXXXXXLRLDATSLNPIDWKIQEGQLRLI 957
            MAGKLMHA++++ +GGG A                  L+L+ATSLNP+DWKIQ+G +R  
Sbjct: 1    MAGKLMHALQYESYGGGAAALKHVQVPVPSPMSNEVLLKLEATSLNPVDWKIQKGMIRPF 60

Query: 956  LPRKFPYIPATDVSGEVVEVSADVKKFRVGDKVVAMLRHSTGGGLAEFAVAPESLTVKRP 777
            LPRKFP IPATDV+GEV+EV + VK F+ GDKVV++L H TGGGLAEFAVA E LTV+RP
Sbjct: 61   LPRKFPCIPATDVAGEVMEVGSGVKNFKAGDKVVSVLSHLTGGGLAEFAVASEKLTVRRP 120

Query: 776  PEVSAVEAAGLPVAALSAHQALTKYAGIKLDGSGKTTNVLITAASGGVGHYAVQLAKLGN 597
             EV   EAA LPVA L+A QALT  AG+KLDG+G   N+L+TAASGGVGHYAVQLAKLGN
Sbjct: 121  EEVGPAEAASLPVAGLTALQALTNPAGLKLDGTGHQANILVTAASGGVGHYAVQLAKLGN 180

Query: 596  THVTATCGARNINFVKSLGADEVLDYKTPEGAALKSPSGRKYDAVIHCALGIPWSTFEPN 417
             HVTATCGARNI+FVKSLGADEVLDYKTPEGAALKSPSG+KYDAVIHCA GIP+STFEPN
Sbjct: 181  AHVTATCGARNIDFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVIHCANGIPFSTFEPN 240

Query: 416  LSECGKLIDLTPGPRALMTYVFNKVTFVKKQLVPMVLIPKAEDLEYMLRLVKDGKLKTVV 237
            L+  GK+ID+TPGP A+ TY   K+T  KKQLVP++LIPKAE+LE+M+ LVK+GK+KTV+
Sbjct: 241  LAANGKVIDITPGPSAMWTYAVKKITMSKKQLVPLLLIPKAENLEFMVNLVKEGKVKTVI 300

Query: 236  DSKHPLSNVEEAWLKGIAGHATGKLIVE 153
            DSKHPLS  EEAW K I GHATGK+IV+
Sbjct: 301  DSKHPLSKAEEAWAKSIDGHATGKIIVQ 328


>gb|ABK96194.1| unknown [Populus trichocarpa]
          Length = 329

 Score =  459 bits (1181), Expect = e-127
 Identities = 228/328 (69%), Positives = 261/328 (79%)
 Frame = -1

Query: 1136 MAGKLMHAVRFDCFGGGVAGXXXXXXXXXXXXXXXXXLRLDATSLNPIDWKIQEGQLRLI 957
            MAGKLMHAV++  +GGG AG                 L+L+ATSLNP+DWK+Q G LR +
Sbjct: 1    MAGKLMHAVQYSTYGGGAAGLKHVEVPVPSAKRDEVLLKLEATSLNPVDWKMQNGLLRPL 60

Query: 956  LPRKFPYIPATDVSGEVVEVSADVKKFRVGDKVVAMLRHSTGGGLAEFAVAPESLTVKRP 777
            LP +FPY+P  DV+GEVVEV   V  F+ GDKVVA+L H +GGGLAEF VA + L V RP
Sbjct: 61   LPWRFPYVPGADVAGEVVEVGPGVTNFKTGDKVVAILSHISGGGLAEFVVAKKGLPVARP 120

Query: 776  PEVSAVEAAGLPVAALSAHQALTKYAGIKLDGSGKTTNVLITAASGGVGHYAVQLAKLGN 597
            PEVSA E AGLPVA L+AHQA+T+ AG+KLDGSG   N+LITAASGGVGHYAVQLAKLGN
Sbjct: 121  PEVSAAEGAGLPVAGLTAHQAVTQSAGVKLDGSGNQKNILITAASGGVGHYAVQLAKLGN 180

Query: 596  THVTATCGARNINFVKSLGADEVLDYKTPEGAALKSPSGRKYDAVIHCALGIPWSTFEPN 417
            THVTATCGARNI FVKSLGADEVLDYKTPEGAALKSPSG+KYDAVIHCA GIPWSTFEPN
Sbjct: 181  THVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVIHCAAGIPWSTFEPN 240

Query: 416  LSECGKLIDLTPGPRALMTYVFNKVTFVKKQLVPMVLIPKAEDLEYMLRLVKDGKLKTVV 237
            LS  GK+ID+TPG  A M   F K+TF KKQLVP++LIP  E+L Y++ LVK+GKLKTV+
Sbjct: 241  LSANGKVIDITPGLSAYMASAFKKLTFSKKQLVPLLLIPNGENLNYLVNLVKEGKLKTVI 300

Query: 236  DSKHPLSNVEEAWLKGIAGHATGKLIVE 153
            DSKHPLS  E+AW K I GHATGK+IVE
Sbjct: 301  DSKHPLSRAEDAWAKIIDGHATGKIIVE 328


Top