BLASTX nr result

ID: Coptis21_contig00003420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003420
         (1298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272273.1| PREDICTED: uncharacterized protein LOC100254...   356   8e-96
emb|CBI17691.3| unnamed protein product [Vitis vinifera]              355   1e-95
ref|XP_002533839.1| conserved hypothetical protein [Ricinus comm...   351   3e-94
ref|XP_002309779.1| predicted protein [Populus trichocarpa] gi|2...   347   3e-93
ref|XP_002328016.1| predicted protein [Populus trichocarpa] gi|2...   342   2e-91

>ref|XP_002272273.1| PREDICTED: uncharacterized protein LOC100254306 [Vitis vinifera]
          Length = 647

 Score =  356 bits (913), Expect = 8e-96
 Identities = 178/307 (57%), Positives = 223/307 (72%), Gaps = 1/307 (0%)
 Frame = +3

Query: 372  LDSG-EGRILLESSNNASNPGKDLADTIRIDPLNKFKKYRGGFDITNKHYWSSTAFTGIY 548
            L SG  GR LL++ N  S P +   DT+R+DPL+ F KYRGG+DITNKHYWSST FTG+ 
Sbjct: 142  LSSGLSGRQLLQTEN-VSEPIRHSDDTVRVDPLDHFNKYRGGYDITNKHYWSSTIFTGVP 200

Query: 549  GYVIGVFWILLGILFGGYALGXXXXXXXXXXXXXXXRVPCSRQCYLWSIIVAVSITFLAX 728
            GY IGV W+L G+ +GG+ L                R PC +QCYLW I++A   T LA 
Sbjct: 201  GYAIGVVWLLCGVGYGGFLLVTTIWCKRDKRKLKKKRSPCYKQCYLWHILLASFFTILAI 260

Query: 729  XXXXXXXXXTTRFHSRAKTVMNIIIDTADEASNTIYNVTGAMRDIRDSIATSKRGNKTVN 908
                       +FHSRA+TV++II++TA++AS TIYN TGAMR+IR ++ T+  G +  N
Sbjct: 261  VASGLVLGGNAKFHSRARTVVDIIMETANKASGTIYNTTGAMRNIRQNLETTDVGAEASN 320

Query: 909  FLTSTSQRLDKDAAVLNKEAKKNRRLIDKGLKIVYITTTVAISLNLVAVIALSVCGVLKL 1088
            FLTSTS +LD +AA + ++A+KNRRLIDKGLKIVYI TTV ISLNLVAVIALSV G LK 
Sbjct: 321  FLTSTSDKLDVEAAGIERQARKNRRLIDKGLKIVYIITTVTISLNLVAVIALSVSGFLKF 380

Query: 1089 RKAFYMLIILCWLMAALCWVFFGLYFSLEKFTGDTCTALQDFQQDPSNSSLSSIVPCDEL 1268
            R+A Y LI+ CW +  LCW+FFG+YF LE F+ DTCTAL+DFQQ+P N+SLSSI+PCDEL
Sbjct: 381  RRALYWLIVFCWFLTFLCWLFFGIYFFLENFSSDTCTALEDFQQNPYNNSLSSILPCDEL 440

Query: 1269 ISAKSVL 1289
            +SAKSVL
Sbjct: 441  LSAKSVL 447


>emb|CBI17691.3| unnamed protein product [Vitis vinifera]
          Length = 531

 Score =  355 bits (911), Expect = 1e-95
 Identities = 175/301 (58%), Positives = 220/301 (73%)
 Frame = +3

Query: 387  GRILLESSNNASNPGKDLADTIRIDPLNKFKKYRGGFDITNKHYWSSTAFTGIYGYVIGV 566
            GR LL++ N  S P +   DT+R+DPL+ F KYRGG+DITNKHYWSST FTG+ GY IGV
Sbjct: 32   GRQLLQTEN-VSEPIRHSDDTVRVDPLDHFNKYRGGYDITNKHYWSSTIFTGVPGYAIGV 90

Query: 567  FWILLGILFGGYALGXXXXXXXXXXXXXXXRVPCSRQCYLWSIIVAVSITFLAXXXXXXX 746
             W+L G+ +GG+ L                R PC +QCYLW I++A   T LA       
Sbjct: 91   VWLLCGVGYGGFLLVTTIWCKRDKRKLKKKRSPCYKQCYLWHILLASFFTILAIVASGLV 150

Query: 747  XXXTTRFHSRAKTVMNIIIDTADEASNTIYNVTGAMRDIRDSIATSKRGNKTVNFLTSTS 926
                 +FHSRA+TV++II++TA++AS TIYN TGAMR+IR ++ T+  G +  NFLTSTS
Sbjct: 151  LGGNAKFHSRARTVVDIIMETANKASGTIYNTTGAMRNIRQNLETTDVGAEASNFLTSTS 210

Query: 927  QRLDKDAAVLNKEAKKNRRLIDKGLKIVYITTTVAISLNLVAVIALSVCGVLKLRKAFYM 1106
             +LD +AA + ++A+KNRRLIDKGLKIVYI TTV ISLNLVAVIALSV G LK R+A Y 
Sbjct: 211  DKLDVEAAGIERQARKNRRLIDKGLKIVYIITTVTISLNLVAVIALSVSGFLKFRRALYW 270

Query: 1107 LIILCWLMAALCWVFFGLYFSLEKFTGDTCTALQDFQQDPSNSSLSSIVPCDELISAKSV 1286
            LI+ CW +  LCW+FFG+YF LE F+ DTCTAL+DFQQ+P N+SLSSI+PCDEL+SAKSV
Sbjct: 271  LIVFCWFLTFLCWLFFGIYFFLENFSSDTCTALEDFQQNPYNNSLSSILPCDELLSAKSV 330

Query: 1287 L 1289
            L
Sbjct: 331  L 331


>ref|XP_002533839.1| conserved hypothetical protein [Ricinus communis]
            gi|223526218|gb|EEF28541.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 523

 Score =  351 bits (900), Expect = 3e-94
 Identities = 171/306 (55%), Positives = 223/306 (72%), Gaps = 10/306 (3%)
 Frame = +3

Query: 408  SNNASNPGKDLAD---------TIRIDPLNKFKKYRGGFDITNKHYWSSTAFTGIYGYVI 560
            S N+S PG DL D         T+R+DPL+ FKKYRGG+DITNKHYWSST FTGIYGY I
Sbjct: 31   STNSSEPGTDLLDRSNVTQSDDTVRVDPLDNFKKYRGGYDITNKHYWSSTVFTGIYGYAI 90

Query: 561  GVFWILLGILFGGYALGXXXXXXXXXXXXXXXRVPCSRQCYLWSIIVAVSITFLAXXXXX 740
            G+ W+L GI++GG  +                R+PC +QCYLW I++A+  T L      
Sbjct: 91   GILWLLAGIVYGGVLIASKYCCKSRKEKLTK-RLPCHKQCYLWPILLAIIFTVLTLTASG 149

Query: 741  XXXXXTTRFHSRAKTVMNIIIDTADEASNTIYNVTGAMRDIRDSI-ATSKRGNKTVNFLT 917
                   +F SRA+TV+NIIIDTAD AS TIYN TGAM++IRD++ A++    +  +FLT
Sbjct: 150  LVLGGNQKFRSRARTVVNIIIDTADGASGTIYNTTGAMKEIRDNLEASNASAGEASSFLT 209

Query: 918  STSQRLDKDAAVLNKEAKKNRRLIDKGLKIVYITTTVAISLNLVAVIALSVCGVLKLRKA 1097
            ST+Q+LD  A  +++EA+K+RRLI+KGLKIVYI TTV ISLNLVA+ ALSVCG L+LR+A
Sbjct: 210  STAQQLDNQADEIHREARKHRRLIEKGLKIVYIITTVTISLNLVAITALSVCGTLRLRRA 269

Query: 1098 FYMLIILCWLMAALCWVFFGLYFSLEKFTGDTCTALQDFQQDPSNSSLSSIVPCDELISA 1277
              +LI+LCW++ ALCW+FFG+YF L KF+GDTCTAL++FQ +P N+SLSSI+PCDE++ A
Sbjct: 270  LNLLIVLCWILTALCWLFFGVYFFLGKFSGDTCTALENFQINPYNNSLSSILPCDEMLRA 329

Query: 1278 KSVLLD 1295
            K +L D
Sbjct: 330  KPILTD 335


>ref|XP_002309779.1| predicted protein [Populus trichocarpa] gi|222852682|gb|EEE90229.1|
            predicted protein [Populus trichocarpa]
          Length = 558

 Score =  347 bits (891), Expect = 3e-93
 Identities = 165/321 (51%), Positives = 225/321 (70%), Gaps = 2/321 (0%)
 Frame = +3

Query: 339  GEVLYKSSTASLDSGEGRILLESSNNASNPGKDLADTIRIDPLNKFKKYRGGFDITNKHY 518
            G  L  + T S +S +    +  +NN S P     DT+R+DPL  FKKY+GG+D+ NKHY
Sbjct: 46   GSNLIAAQTFSSNSSKPGTYVRDANNVSQPMIRSDDTVRLDPLENFKKYKGGYDVKNKHY 105

Query: 519  WSSTAFTGIYGYVIGVFWILLGILFGGYALGXXXXXXXXXXXXXXXRVPCSRQCYLWSII 698
            WSST FTG++GYV+GV W+L GI +GG+ L                R+PC +QCYLW I+
Sbjct: 106  WSSTIFTGVHGYVVGVIWLLGGIAYGGFLLATAFCCKTRRYGQLKKRLPCHKQCYLWPIL 165

Query: 699  VAVSITFLAXXXXXXXXXXTTRFHSRAKTVMNIIIDTADEASNTIYNVTGAMRDIRDSIA 878
            +A+  T LA            +FHSRAK V++IIIDTA++A  T+YN TG M+D+++++ 
Sbjct: 166  LAIFFTILAITASGLVLGGNAKFHSRAKNVVDIIIDTANDAWKTMYNTTGVMKDMKENLG 225

Query: 879  TSKR--GNKTVNFLTSTSQRLDKDAAVLNKEAKKNRRLIDKGLKIVYITTTVAISLNLVA 1052
             SK+    +   FLT+TS +LD +AA + + A+KNR LIDKGLKIVYI TTV ISLNL A
Sbjct: 226  VSKQRAAAQASTFLTTTSAKLDAEAADIQRRARKNRHLIDKGLKIVYIVTTVTISLNLAA 285

Query: 1053 VIALSVCGVLKLRKAFYMLIILCWLMAALCWVFFGLYFSLEKFTGDTCTALQDFQQDPSN 1232
            +IALSVCG L+LR+  Y+LI++CW++  LCW+FFGLYF LE F+ D+C AL++FQQ+P N
Sbjct: 286  LIALSVCGTLRLRRPLYILIVVCWILTVLCWLFFGLYFFLENFSRDSCAALKNFQQNPYN 345

Query: 1233 SSLSSIVPCDELISAKSVLLD 1295
            +SLSSI+PCD+L+SAK+VL D
Sbjct: 346  NSLSSILPCDQLLSAKAVLFD 366


>ref|XP_002328016.1| predicted protein [Populus trichocarpa] gi|222837425|gb|EEE75804.1|
            predicted protein [Populus trichocarpa]
          Length = 552

 Score =  342 bits (876), Expect = 2e-91
 Identities = 161/286 (56%), Positives = 212/286 (74%), Gaps = 2/286 (0%)
 Frame = +3

Query: 444  DTIRIDPLNKFKKYRGGFDITNKHYWSSTAFTGIYGYVIGVFWILLGILFGGYALGXXXX 623
            DT+R+DPL   KKYRGG+DI NKHYWSST FTG++GYVIGV W+L GI +GG+ L     
Sbjct: 76   DTVRVDPLKDLKKYRGGYDIKNKHYWSSTMFTGVHGYVIGVIWLLGGIAYGGFLLATVFC 135

Query: 624  XXXXXXXXXXXRVPCSRQCYLWSIIVAVSITFLAXXXXXXXXXXTTRFHSRAKTVMNIII 803
                       R+PC +QCYLW I++A+  T LA            +FHSRAKTV++III
Sbjct: 136  CKNRRNEKLKKRLPCHKQCYLWPILLAIFFTILAITASGLVLGGNAKFHSRAKTVVDIII 195

Query: 804  DTADEASNTIYNVTGAMRDIRDSIATSKRGN--KTVNFLTSTSQRLDKDAAVLNKEAKKN 977
            DTA+ A+ T+YN TGAM+D+++S+  S +    +  +FLTSTS++LD +AA + ++A+KN
Sbjct: 196  DTANNATKTMYNTTGAMKDMKESLGASNQSAAVQASSFLTSTSEQLDVEAADIQRQARKN 255

Query: 978  RRLIDKGLKIVYITTTVAISLNLVAVIALSVCGVLKLRKAFYMLIILCWLMAALCWVFFG 1157
            RRLIDKGLKIVYI TTV ISLNL A+IALSVCG L+LR+   +LI +CW++  LCW+FFG
Sbjct: 256  RRLIDKGLKIVYIVTTVTISLNLAALIALSVCGTLRLRRPLNILIAVCWILTVLCWIFFG 315

Query: 1158 LYFSLEKFTGDTCTALQDFQQDPSNSSLSSIVPCDELISAKSVLLD 1295
            LYF L+ F+ D+CTAL+ FQQ+P N+SLSSI+PCD+L+SAK VL D
Sbjct: 316  LYFFLQNFSRDSCTALESFQQNPYNNSLSSILPCDQLLSAKPVLFD 361


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