BLASTX nr result

ID: Coptis21_contig00003408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003408
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q42699.1|METE_CATRO RecName: Full=5-methyltetrahydropteroyltr...   109   2e-22
ref|XP_003554033.1| PREDICTED: 5-methyltetrahydropteroyltrigluta...   109   2e-22
gb|AEO86798.1| methionine synthase [Camellia sinensis]                108   5e-22
ref|XP_002328083.1| vitamin-b12 independent methionine synthase,...   106   2e-21
ref|XP_002276438.1| PREDICTED: 5-methyltetrahydropteroyltrigluta...   106   2e-21

>sp|Q42699.1|METE_CATRO RecName: Full=5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase; AltName: Full=Cobalamin-independent
           methionine synthase isozyme; AltName:
           Full=Vitamin-B12-independent methionine synthase isozyme
           gi|886471|emb|CAA58474.1| methionine synthase
           [Catharanthus roseus]
          Length = 765

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/57 (92%), Positives = 55/57 (96%)
 Frame = +3

Query: 60  MASHIVGYPRMGPKRELKFALESFWDKKSSAEDLQMVAANLRSSIWKQMSGAGIKYI 230
           MASHIVGYPRMGPKRELKFALESFWDKKSSAEDLQ VAA+LRSSIWKQM+ AGIKYI
Sbjct: 1   MASHIVGYPRMGPKRELKFALESFWDKKSSAEDLQKVAADLRSSIWKQMADAGIKYI 57


>ref|XP_003554033.1| PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase-like isoform 1 [Glycine max]
           gi|356571746|ref|XP_003554034.1| PREDICTED:
           5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase-like isoform 2 [Glycine max]
          Length = 763

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/57 (92%), Positives = 55/57 (96%)
 Frame = +3

Query: 60  MASHIVGYPRMGPKRELKFALESFWDKKSSAEDLQMVAANLRSSIWKQMSGAGIKYI 230
           MASHIVGYPRMGPKRELKFALESFWD KSSAEDLQ VAA+LRSSIWKQM+GAGIKYI
Sbjct: 1   MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVAADLRSSIWKQMAGAGIKYI 57


>gb|AEO86798.1| methionine synthase [Camellia sinensis]
          Length = 765

 Score =  108 bits (270), Expect = 5e-22
 Identities = 52/57 (91%), Positives = 55/57 (96%)
 Frame = +3

Query: 60  MASHIVGYPRMGPKRELKFALESFWDKKSSAEDLQMVAANLRSSIWKQMSGAGIKYI 230
           MASHIVGYPRMGPKRELKFALESFWDKKSSAEDL+ VAA+LRSSIWKQM+ AGIKYI
Sbjct: 1   MASHIVGYPRMGPKRELKFALESFWDKKSSAEDLKKVAADLRSSIWKQMASAGIKYI 57


>ref|XP_002328083.1| vitamin-b12 independent methionine synthase,
           5-methyltetrahydropteroyltriglutamate-homocysteine
           [Populus trichocarpa] gi|222837598|gb|EEE75963.1|
           vitamin-b12 independent methionine synthase,
           5-methyltetrahydropteroyltriglutamate-homocysteine
           [Populus trichocarpa]
          Length = 765

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/57 (91%), Positives = 54/57 (94%)
 Frame = +3

Query: 60  MASHIVGYPRMGPKRELKFALESFWDKKSSAEDLQMVAANLRSSIWKQMSGAGIKYI 230
           MASHIVGYPRMGPKRELKFALESFWD KSSAEDLQ VAA+LRSSIWKQMS AGIK+I
Sbjct: 1   MASHIVGYPRMGPKRELKFALESFWDGKSSAEDLQKVAADLRSSIWKQMSDAGIKFI 57


>ref|XP_002276438.1| PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine
           methyltransferase [Vitis vinifera]
          Length = 765

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/57 (89%), Positives = 54/57 (94%)
 Frame = +3

Query: 60  MASHIVGYPRMGPKRELKFALESFWDKKSSAEDLQMVAANLRSSIWKQMSGAGIKYI 230
           MASHIVGYPRMGPKRELKFALESFWDKKSSAEDLQ VAA+LR+SIWKQM+ AG KYI
Sbjct: 1   MASHIVGYPRMGPKRELKFALESFWDKKSSAEDLQKVAADLRASIWKQMADAGTKYI 57


Top