BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003404
         (2326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [V...   446   e-122
emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]   431   e-118
ref|XP_002512587.1| conserved hypothetical protein [Ricinus comm...   400   e-109
ref|XP_002330047.1| predicted protein [Populus trichocarpa] gi|2...   370   e-100
gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]   350   1e-93

>ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
          Length = 752

 Score =  446 bits (1147), Expect = e-122
 Identities = 274/578 (47%), Positives = 337/578 (58%), Gaps = 36/578 (6%)
 Frame = -2

Query: 1626 MPYSQLQRMAKDKLESSTHFKMTSSLADLASIPHNDFSELVWENGQILLQGQSNRTRKTT 1447
            MP+S+L RMAK K ES     +     DL+  P NDF ELVWE GQI++QGQS+R RK+ 
Sbjct: 1    MPFSELYRMAKGKPES-----VQQKTNDLSFGPENDFVELVWEGGQIMMQGQSSRARKSP 55

Query: 1446 F-NTNPSIGPKGKDGD------ALPSNLKTTHCCLNDFSSSGLSSRQMGLGQEDELVPWI 1288
              N+ PS  PK +D D      +      +    LNDF  S + S +MGL Q+D++VPW+
Sbjct: 56   LSNSFPSHTPKPRDKDTGHGTNSKMGKFGSMDFILNDFPLS-VPSAEMGLSQDDDMVPWL 114

Query: 1287 NYPLD-----DYCSEFFSELPGVDQNSFSA---------QNSAVPVLKNTNYGHFVRGPH 1150
            NYP+D     DYCS+F  EL GV  N  S          +NS    +K++N        H
Sbjct: 115  NYPIDESLQHDYCSDFLQELSGVTVNELSTHCNFASGEKRNSNNQTIKDSN----TISAH 170

Query: 1149 GGANSEQGNAPKLVRESSE------SRL-----QRCESSFPSHRPSVPHLSVGCNTNNAQ 1003
             G + EQGNA K      E      S+L     Q+C++ FPS R  V    +  NT+NA 
Sbjct: 171  NGVSLEQGNASKASAAGVEPSRPRSSQLYPPSSQQCQTLFPSMRSKVSD-PISNNTSNAM 229

Query: 1002 QANCGNSSQK----AAGLLNTKTQQQEPKPSRPLTQLSNNTGIANFSHFLRPATFVKTNR 835
                  +S +     +G  +TKTQ+Q+P  +R      NN+G+ NFSHF RPA  VK N 
Sbjct: 230  HHTVSGNSIRLPASTSGFSSTKTQKQDPGQTR------NNSGLMNFSHFSRPAALVKANL 283

Query: 834  QDGDAAPVSSSLGNDRLRNNDKGSVVSCSNHIHSTVTDYTNASRSLTDCISEPNSFAEKV 655
            Q+  A    SS   DR+ + DK    S  N   S   D +   +   D  SEP      V
Sbjct: 284  QNIGAIAGPSSSSKDRIGSKDKQPAASSRNPAESRHVDSSCGLQKDVDSHSEPVMVPASV 343

Query: 654  DGKPYMGKPPMEPMCIEHPEADCRENTLGKSRSPDPALGQTSSFAVSTTMGMPDNEKYIE 475
            D KP + K   EP+  E     C+E      +S +  LG        T  G+PD EK IE
Sbjct: 344  DLKPVVAKTMEEPLPAEQSPVICQEGACKNEKSSNQVLG------ARTAKGIPDGEKTIE 397

Query: 474  PVVASSSICSGNNPKGASNDPKQRLKRTSRDNEELDYQSEDIEEESVGVRKPASARGGAS 295
            P VA SS+CSGN+ + ASNDPK  LKR  RD EE +  SED+EEESVGVRK A A+GG  
Sbjct: 398  PAVACSSVCSGNSVERASNDPKHNLKRKCRDTEESECPSEDVEEESVGVRKSAPAKGGTG 457

Query: 294  TKRGRAAEVHNLSERRRRDRINEKMKALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 115
            +KR RAAEVHNLSERRRRDRINEKM+ALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI
Sbjct: 458  SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 517

Query: 114  MSMGTGLFMPPMMLPNGIPHINAQHLSPFAPMNAGMGI 1
            MSMGTGL MPPMMLP G+ HI+A H+  F PM  GMG+
Sbjct: 518  MSMGTGLCMPPMMLPTGMQHIHAAHMGHFPPMGVGMGM 555


>emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
          Length = 627

 Score =  431 bits (1107), Expect = e-118
 Identities = 270/578 (46%), Positives = 330/578 (57%), Gaps = 36/578 (6%)
 Frame = -2

Query: 1626 MPYSQLQRMAKDKLESSTHFKMTSSLADLASIPHNDFSELVWENGQILLQGQSNRTRKTT 1447
            MP+S+L RMAK K ES     +     DL+  P NDF ELVWE GQI++QGQS+R RK+ 
Sbjct: 1    MPFSELYRMAKGKPES-----VQQKTNDLSFGPENDFVELVWEGGQIMMQGQSSRARKSP 55

Query: 1446 F-NTNPSIGPKGKDGD------ALPSNLKTTHCCLNDFSSSGLSSRQMGLGQEDELVPWI 1288
              N+ PS  PK +D D      +      +    LNDF  S + S +MGL Q+D++VPW+
Sbjct: 56   LSNSFPSHTPKPRDKDTGHGTNSKMGKFGSMDFILNDFPLS-VPSAEMGLSQDDDMVPWL 114

Query: 1287 NYPLD-----DYCSEFFSELPGVDQNSFSA---------QNSAVPVLKNTNYGHFVRGPH 1150
            NYP+D     DYCS+F  EL GV  N  S          +NS    +K++N        H
Sbjct: 115  NYPIDESLQHDYCSDFLQELSGVTVNELSTHCNFASGEKRNSNNQTIKDSN----TISAH 170

Query: 1149 GGANSEQGNAPKLVRESSE------SRL-----QRCESSFPSHRPSVPHLSVGCNTNNAQ 1003
             G + EQGNA K      E      S+L     Q+C++ FPS R  V    +  NT+NA 
Sbjct: 171  NGVSLEQGNASKASAAGVEPSRPRSSQLYPPSSQQCQTLFPSMRSKVSD-PISNNTSNAM 229

Query: 1002 QANCGNSSQK----AAGLLNTKTQQQEPKPSRPLTQLSNNTGIANFSHFLRPATFVKTNR 835
                  +S +     +G  +TKTQ+Q+P  +R      NN+G+ NFSHF RPA  VK N 
Sbjct: 230  HHTVSGNSIRLPASTSGFSSTKTQKQDPGQTR------NNSGLMNFSHFSRPAALVKANL 283

Query: 834  QDGDAAPVSSSLGNDRLRNNDKGSVVSCSNHIHSTVTDYTNASRSLTDCISEPNSFAEKV 655
            Q+  A    SS   DR+ + DK    S  N   S   D +   +   D  SEP      V
Sbjct: 284  QNIGAIAGPSSSSKDRIGSKDKQPAASSRNPAESRHVDSSCGLQKDVDSHSEPVMVPASV 343

Query: 654  DGKPYMGKPPMEPMCIEHPEADCRENTLGKSRSPDPALGQTSSFAVSTTMGMPDNEKYIE 475
            D KP + K   EP+                     PA          T  G+PD EK IE
Sbjct: 344  DLKPVVAKTMEEPL---------------------PAEQSPVHLPRRTAKGIPDGEKSIE 382

Query: 474  PVVASSSICSGNNPKGASNDPKQRLKRTSRDNEELDYQSEDIEEESVGVRKPASARGGAS 295
            P VA SS+CSGN+ + ASNDPK  LKR  RD EE +  SED+EEESVGVRK A A+GG  
Sbjct: 383  PAVACSSVCSGNSVERASNDPKHNLKRKCRDTEESECPSEDVEEESVGVRKSAPAKGGTG 442

Query: 294  TKRGRAAEVHNLSERRRRDRINEKMKALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 115
            +KR RAAEVHNLSERRRRDRINEKM+ALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI
Sbjct: 443  SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQI 502

Query: 114  MSMGTGLFMPPMMLPNGIPHINAQHLSPFAPMNAGMGI 1
            MSMGTGL MPPMMLP G+ HI+A H+  F PM  GMG+
Sbjct: 503  MSMGTGLCMPPMMLPTGMQHIHAAHMGHFPPMGVGMGM 540


>ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
            gi|223548548|gb|EEF50039.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 758

 Score =  400 bits (1029), Expect = e-109
 Identities = 251/581 (43%), Positives = 324/581 (55%), Gaps = 40/581 (6%)
 Frame = -2

Query: 1626 MPYSQLQ-RMAKDKLESSTHFKMTSSLADLASIPHNDFSELVWENGQILLQGQSNRTRKT 1450
            MP S+L  R++K K +SS+  K T+   DL++ P NDF ELVWENGQI    QS+R RK 
Sbjct: 1    MPLSELICRLSKGKFDSSSQEKNTTCSTDLSAGPENDFLELVWENGQI----QSSRARKI 56

Query: 1449 TFNTNPSIGPKGKDGDAL-----PSNLKTTHCCLNDFSSS----GLSSRQMGLGQEDELV 1297
            + N   S   K +D D        +N K       DF        + S +MGL QED++V
Sbjct: 57   S-NGVQSQTSKFRDKDISIGIGNGNNTKMGRFGAMDFGLDEVPMSVPSVEMGLNQEDDMV 115

Query: 1296 PWINYPLDD-----YCSEFFSELPGVDQNSFSAQNSAVPVLKNTNYGHFVRGPH-----G 1147
            PW+N P+DD     YC EF +EL GV  N   AQNS     K  N    VR  H      
Sbjct: 116  PWLNDPIDDSLQQDYCHEFLAELSGVTVNEH-AQNSFASSDKKCNGNQSVRDSHTASVHN 174

Query: 1146 GANSEQGNAPKL--------------VRESSESRLQRCESSFPSHRPSVPHLSVGCNTNN 1009
            G + EQG+ P++                +   S +Q+C++SFP  R  +   +     N+
Sbjct: 175  GLSLEQGHMPRVSSGRDGDATRSRTTASQLYSSSVQQCQASFPHFRSRISANNAESTNNS 234

Query: 1008 AQQANCGN---SSQKAAGLLNTKTQQQEPKPSRPLTQLSNNTGIANFSHFLRPATFVKTN 838
               A+ G+    S    G  + K Q+Q P         + N+ + NFSHF RP    K N
Sbjct: 235  THVASSGDPIRGSPSGGGFPSIKAQKQVP------VLATTNSSLMNFSHFSRPVALAKAN 288

Query: 837  RQDGDAAPVSSSLGNDRLRNNDKGSVVSCSNHIHSTVTDYTNASRSLTDCISEPNSFAEK 658
             ++      S     +R+ + DKGS+ S SN   S + +  +  +  T     P   + K
Sbjct: 289  FENIGTRAGSGISSIERIGSQDKGSIASSSNPAESMLNETFSGLKKETSSRCRPVMVSSK 348

Query: 657  VDGKPYMGKPPMEPMCIEHPEA---DCRENTLGKSRSPDPALGQTSSFAVSTTMGMPDNE 487
            VD KP   +P  EP+  + PEA   DC+ +                 FA S T G+ D E
Sbjct: 349  VDDKPLDHRPAEEPLLAKQPEAMENDCKNDK------------NHCQFAASATKGLADGE 396

Query: 486  KYIEPVVASSSICSGNNPKGASNDPKQRLKRTSRDNEELDYQSEDIEEESVGVRKPASAR 307
            K  EP+VASSS+CSGN+ +  S++P Q LKR  R+ EE +  SED+EEESVG +K A AR
Sbjct: 397  KTAEPIVASSSVCSGNSMERVSDEPMQNLKRKHRETEESEGPSEDVEEESVGGKKAAPAR 456

Query: 306  GGASTKRGRAAEVHNLSERRRRDRINEKMKALQELIPNCNKVDKASMLDEAIEYLKTLQL 127
            GG  +KR RAAEVHNLSERRRRDRINEKM+ALQELIPNCNKVDKASMLDEAIEYLKTLQL
Sbjct: 457  GGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQL 516

Query: 126  QVQIMSMGTGLFMPPMMLPNGIPHINAQHLSPFAPMNAGMG 4
            QVQIMSMG GL+MP MMLP G+PH++  H+S F+PM  GMG
Sbjct: 517  QVQIMSMGAGLYMPSMMLPPGVPHMHVAHMSQFSPMGVGMG 557


>ref|XP_002330047.1| predicted protein [Populus trichocarpa] gi|222871472|gb|EEF08603.1|
            predicted protein [Populus trichocarpa]
          Length = 733

 Score =  370 bits (951), Expect = e-100
 Identities = 250/570 (43%), Positives = 314/570 (55%), Gaps = 36/570 (6%)
 Frame = -2

Query: 1602 MAKDKLESSTHFKMTSSLADLASI-PHNDFSELVWENGQILLQGQSNRTRKTT-FNTNPS 1429
            MAK K++ S   K  S   DL+ + P NDF EL+WENGQI    QS+R RK    +T P 
Sbjct: 1    MAKGKIDFSQE-KDPSCSTDLSFVRPENDFGELIWENGQI----QSSRARKIQPCSTLPC 55

Query: 1428 IGPK------GKDGDALPSNLKTTHCCLNDFSSSGLSSRQMGLGQEDELVPWINYPLD-- 1273
              PK      G   D            LN+   S + + +MG+ Q+D++VPW+NYPLD  
Sbjct: 56   QNPKIRYKDIGNGTDIRTGKFGMMESTLNELPMS-VPAVEMGVNQDDDMVPWLNYPLDES 114

Query: 1272 ---DYCSEFFSELPGVDQNSFSAQNSAVPVLKNTNYGHFVRGP-----HGGANSEQGNAP 1117
               DYCSEF  EL GV  N  S+Q++  P     ++   VR       H G + EQG+  
Sbjct: 115  PQHDYCSEFLPELSGVTVNGHSSQSN-FPSFGKKSFSQSVRDSRTVSVHNGLSLEQGDVA 173

Query: 1116 KLVR---------ESSESRL-----QRCESSFPSHRPSVPHLSVGCNTNNAQQANCGNSS 979
            K             +S S+L     + C++SFP  R  V   + G +T+NA        S
Sbjct: 174  KNSSAGDTEANRPRTSASQLYLSSSEHCQTSFPYFRSRVSAKN-GDSTSNAAHHVVSVDS 232

Query: 978  QKA----AGLLNTKTQQQEPKPSRPLTQLSNNTGIANFSHFLRPATFVKTNRQDGDAAPV 811
             +A     G  + K Q+Q P       Q + N+ + NFSHF RPA   K N Q+      
Sbjct: 233  IRAPTSGGGFPSIKMQKQVP------AQSTTNSSLMNFSHFARPAALAKANLQNIGMRAG 286

Query: 810  SSSLGNDRLRNNDKGSVVSCSNHIHSTVTDYTNASRSLTDCISEPNSFAEKVDGKPYMGK 631
            +     +R +N DKGS+ S SN    T  +  +     T     P     KVD KP   K
Sbjct: 287  TGISNMERTQNKDKGSIASSSNPAECTPINSCSGLLKETSSHCLPVLMPPKVDAKPSEAK 346

Query: 630  PPMEPMCIEHPEADCRENTLGKSRSPDPALGQTSSFAVSTTMGMPDNEKYIEPVVASSSI 451
            P    +  E PEA   E   G S+S         +F  S   G+ D EK  EPVVASSS+
Sbjct: 347  PAEGFVPAELPEATIPE---GDSKSDRNC---RQNFCESAIKGVADVEKTKEPVVASSSV 400

Query: 450  CSGNNPKGASNDPKQRLKRTSRDNEELDYQSEDIEEESVGVRKPASARGGASTKRGRAAE 271
             S N+ + AS+DP + LKR  RD EE +  SED+EEESVG +K A AR G  +KR RAAE
Sbjct: 401  GSDNSVERASDDPTENLKRKHRDTEESEGPSEDVEEESVGAKKQAPARAGNGSKRNRAAE 460

Query: 270  VHNLSERRRRDRINEKMKALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGTGLF 91
            VHNLSERRRRDRINEKM+ALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMG GL+
Sbjct: 461  VHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIMSMGAGLY 520

Query: 90   MPPMMLPNGIPHINAQHLSPFAPMNAGMGI 1
            MP MMLP G+PH++A H+  F PM  GMG+
Sbjct: 521  MPSMMLPPGMPHMHAAHMGQFLPMGVGMGM 550


>gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
          Length = 713

 Score =  350 bits (897), Expect = 1e-93
 Identities = 236/577 (40%), Positives = 322/577 (55%), Gaps = 35/577 (6%)
 Frame = -2

Query: 1626 MPYSQLQRMAKDKLESSTHFKMTSSLADLASIPHNDFSELVWENGQILLQGQSNRTRKT- 1450
            MP+S+L RMA  +++SS  F+             NDF ELVWENGQ+++QGQS+RTRK  
Sbjct: 1    MPFSELYRMA-GRVDSSQDFE-------------NDFLELVWENGQVVMQGQSSRTRKNP 46

Query: 1449 TFNTNPSIG-PKGKDGDALPSNLKTT-------HCCLNDFSSSGLSSRQMGLGQEDELVP 1294
            + NT PS   PK +D D   SN+  T          L++   S + S +MGL ++D+ +P
Sbjct: 47   SCNTLPSYNTPKNRDRDVGNSNIGKTGKFGFVVDSELDEIPLS-VPSSEMGLSEDDDTLP 105

Query: 1293 WINYPLDD-----YCSEFFSELPGVDQNSFSAQNSAVPVLKNTNYGHFVR-----GPHGG 1144
            W+NY +D+     YC +F  E      N  S+ ++   + K ++    +R       H  
Sbjct: 106  WLNYSIDEPLHHEYCHDFLPEFSSATANEASSNHNLASIDKRSSSSQVLRDSNPNSAHED 165

Query: 1143 ANSEQGNAPK--LVRESSESR------------LQRCESSFPSHRPSVPHLSVGCNTNNA 1006
            A  +Q N  K  L+  +  SR             Q+ ++S+PS R  V   + G NT+  
Sbjct: 166  ACLQQRNVGKVALIGRADVSRPRTGTSQLHSLSSQQSQASYPSFRSRVSD-TAGDNTSAT 224

Query: 1005 QQANCGNSSQ--KAAGLLNTKTQQQEPKPSRPLTQLSNNTGIANFSHFLRPATFVKTNRQ 832
             +    NS+Q   A G    K  + +P     +T  +NN  I NFSHF RPA  VK N Q
Sbjct: 225  HRDVGKNSTQISSAGGSPGMKILRPDP-----VTPSNNNPSIVNFSHFSRPAALVKANVQ 279

Query: 831  DGDAAPVSSSLGNDRLRNNDKGSVVSCSNHIHSTVTDYTNASRSLTDCISEPNSFAEKVD 652
                   S S    R+ N DK S  + +N   S   D ++++   ++   +       V+
Sbjct: 280  TNGVMAGSGSSSMIRIANKDKFSAATSNNLPESMPIDSSSSAPKESNSQCQQILVRSSVE 339

Query: 651  GKPYMGKPPMEPMCIEHPEADCRENTLGKSRSPDPALGQTSSFAVSTTMGMPDNEKYIEP 472
             KP   KP  EP   +  E  C+E T  K       +   S+  VS     P+ EK +EP
Sbjct: 340  LKPTEAKPLEEPCTAKQSEGTCQEET-SKDDINSNHIPCESAVRVS-----PNGEKTVEP 393

Query: 471  VVASSSICSGNNPKGASNDPKQRLKRTSRDNEELDYQSEDIEEESVGVRKPASARGGAST 292
            VVASS +CSGN+ +  S+DP Q LKR  R+ +E +  S+D+EEE +GV+K   ARG  S 
Sbjct: 394  VVASS-VCSGNSVERGSDDPTQALKRKFRETDESECHSDDVEEEYMGVKKGDHARGMGS- 451

Query: 291  KRGRAAEVHNLSERRRRDRINEKMKALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQIM 112
            KR RAAEVHNLSERRRRDRINEKM+ALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQ+M
Sbjct: 452  KRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKTLQLQVQMM 511

Query: 111  SMGTGLFMPPMMLPNGIPHINAQHLSPFAPMNAGMGI 1
            SMG G++MPPMMLP G+ H++   ++ F+PM  GMG+
Sbjct: 512  SMGAGMYMPPMMLPPGMQHMHGPCMAHFSPMGVGMGM 548