BLASTX nr result

ID: Coptis21_contig00003399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003399
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264379.2| PREDICTED: UPF0176 protein pc0378-like [Viti...   179   2e-43
emb|CBI35293.3| unnamed protein product [Vitis vinifera]              179   2e-43
ref|XP_002329728.1| predicted protein [Populus trichocarpa] gi|2...   158   4e-37
ref|XP_003525174.1| PREDICTED: UPF0176 protein pc0378-like isofo...   154   6e-36
ref|XP_003525173.1| PREDICTED: UPF0176 protein pc0378-like isofo...   154   6e-36

>ref|XP_002264379.2| PREDICTED: UPF0176 protein pc0378-like [Vitis vinifera]
          Length = 441

 Score =  179 bits (454), Expect = 2e-43
 Identities = 81/107 (75%), Positives = 92/107 (85%)
 Frame = -2

Query: 322 IYSSILRERGFQNLFTLKGGVSHYLEKEGPVKWIGNLFVFDSRLSLPPSTYKPEAVSNRD 143
           +YS+ILR+RGFQNL+TLKGGVSHYLEKEGP++WIGNLFVFDSRLSLPPSTYK EAVS   
Sbjct: 293 VYSAILRQRGFQNLYTLKGGVSHYLEKEGPMEWIGNLFVFDSRLSLPPSTYKTEAVSETS 352

Query: 142 KLHLVCDDSNFARCYICQSRLSELRHRNCANIDCNRLFLCCSTCLME 2
             H V + S FARCYIC S+L ELRHRNCAN+DCN LFLCC+ CL +
Sbjct: 353 GAHQVSEGSTFARCYICNSQLHELRHRNCANLDCNLLFLCCTQCLKD 399


>emb|CBI35293.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score =  179 bits (454), Expect = 2e-43
 Identities = 81/107 (75%), Positives = 92/107 (85%)
 Frame = -2

Query: 322 IYSSILRERGFQNLFTLKGGVSHYLEKEGPVKWIGNLFVFDSRLSLPPSTYKPEAVSNRD 143
           +YS+ILR+RGFQNL+TLKGGVSHYLEKEGP++WIGNLFVFDSRLSLPPSTYK EAVS   
Sbjct: 192 VYSAILRQRGFQNLYTLKGGVSHYLEKEGPMEWIGNLFVFDSRLSLPPSTYKTEAVSETS 251

Query: 142 KLHLVCDDSNFARCYICQSRLSELRHRNCANIDCNRLFLCCSTCLME 2
             H V + S FARCYIC S+L ELRHRNCAN+DCN LFLCC+ CL +
Sbjct: 252 GAHQVSEGSTFARCYICNSQLHELRHRNCANLDCNLLFLCCTQCLKD 298


>ref|XP_002329728.1| predicted protein [Populus trichocarpa] gi|222870636|gb|EEF07767.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score =  158 bits (400), Expect = 4e-37
 Identities = 71/107 (66%), Positives = 84/107 (78%)
 Frame = -2

Query: 322 IYSSILRERGFQNLFTLKGGVSHYLEKEGPVKWIGNLFVFDSRLSLPPSTYKPEAVSNRD 143
           +YS+ILR+RGFQNL+TLKGGVSHYL+ EGPV+W+GNLFVFD RLSLPPS Y PE  +   
Sbjct: 312 VYSTILRQRGFQNLYTLKGGVSHYLQNEGPVEWVGNLFVFDDRLSLPPSAYNPEDTTVPS 371

Query: 142 KLHLVCDDSNFARCYICQSRLSELRHRNCANIDCNRLFLCCSTCLME 2
                C +  FA CYIC S++SELRHRNCANIDCN LFLCC  C+ +
Sbjct: 372 SNPQGCKNILFANCYICGSQVSELRHRNCANIDCNLLFLCCMECVKD 418


>ref|XP_003525174.1| PREDICTED: UPF0176 protein pc0378-like isoform 2 [Glycine max]
          Length = 416

 Score =  154 bits (390), Expect = 6e-36
 Identities = 69/104 (66%), Positives = 82/104 (78%)
 Frame = -2

Query: 322 IYSSILRERGFQNLFTLKGGVSHYLEKEGPVKWIGNLFVFDSRLSLPPSTYKPEAVSNRD 143
           +YSSILR++GFQNL+TLKGGVSHYL+ EGP +W+GNLFVFDSRLSLPPS Y   A +  +
Sbjct: 267 VYSSILRQQGFQNLYTLKGGVSHYLKNEGPAEWVGNLFVFDSRLSLPPSIYYTGATTEAE 326

Query: 142 KLHLVCDDSNFARCYICQSRLSELRHRNCANIDCNRLFLCCSTC 11
               V  D NFA+CY+C   +SELRHRNCAN+DCN LFLCC  C
Sbjct: 327 STP-VSGDDNFAKCYVCSLEVSELRHRNCANLDCNLLFLCCGQC 369


>ref|XP_003525173.1| PREDICTED: UPF0176 protein pc0378-like isoform 1 [Glycine max]
          Length = 437

 Score =  154 bits (390), Expect = 6e-36
 Identities = 69/104 (66%), Positives = 82/104 (78%)
 Frame = -2

Query: 322 IYSSILRERGFQNLFTLKGGVSHYLEKEGPVKWIGNLFVFDSRLSLPPSTYKPEAVSNRD 143
           +YSSILR++GFQNL+TLKGGVSHYL+ EGP +W+GNLFVFDSRLSLPPS Y   A +  +
Sbjct: 288 VYSSILRQQGFQNLYTLKGGVSHYLKNEGPAEWVGNLFVFDSRLSLPPSIYYTGATTEAE 347

Query: 142 KLHLVCDDSNFARCYICQSRLSELRHRNCANIDCNRLFLCCSTC 11
               V  D NFA+CY+C   +SELRHRNCAN+DCN LFLCC  C
Sbjct: 348 STP-VSGDDNFAKCYVCSLEVSELRHRNCANLDCNLLFLCCGQC 390


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