BLASTX nr result

ID: Coptis21_contig00003385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003385
         (1867 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633593.1| PREDICTED: SURP and G-patch domain-containin...   501   e-139
ref|XP_003633594.1| PREDICTED: SURP and G-patch domain-containin...   496   e-138
ref|XP_002513189.1| arginine/serine rich splicing factor sf4/14,...   454   e-125
ref|XP_002314024.1| predicted protein [Populus trichocarpa] gi|2...   447   e-123
ref|XP_003546875.1| PREDICTED: SURP and G-patch domain-containin...   441   e-121

>ref|XP_003633593.1| PREDICTED: SURP and G-patch domain-containing protein 1-like
            protein-like isoform 1 [Vitis vinifera]
          Length = 459

 Score =  501 bits (1289), Expect = e-139
 Identities = 280/474 (59%), Positives = 316/474 (66%), Gaps = 19/474 (4%)
 Frame = +3

Query: 324  FTMEKEKASSLFVNDGSFMERFKQLQQQ---QKNKGTAPEEPNP--IITPSSKQTSVITK 488
            FTMEK  A SLFVNDGSFMERFKQLQQ+   +K KG   EEP    ++  +S   S+ +K
Sbjct: 14   FTMEKGAAPSLFVNDGSFMERFKQLQQENEKEKGKGAKLEEPKQRMVVPATSTPNSIPSK 73

Query: 489  VNFESKPIDTRKATPVSSSGKLAFSLKQKSKLVAAPVRLGADEDEDEGDVRDAPCDGPVK 668
             N  SK   TRK    + +GKLAFSLKQKSKLV  PV+LGADEDE+E D  +   D P+K
Sbjct: 74   TNNVSKTNGTRKTPLAAPNGKLAFSLKQKSKLVPPPVKLGADEDEEETDAGNLSSDAPMK 133

Query: 669  RQKLGQQEASTLPSDHGDVAYALSIYXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXA 848
            RQKLGQ+++S  PS   DVA                                       A
Sbjct: 134  RQKLGQKDSSEHPSPQVDVA---------------------------PPSPSDPAVKKVA 166

Query: 849  DKLASFVAKNGRQFEHITRQRNPGDTPFKFLFDTGCADYKYYESRLIEEERLLAPTVDFQ 1028
            DKLASFVAKNGRQFE +TRQRNPGDTPFKFLFD GCADYKYYE RL EEE+ L+ T D Q
Sbjct: 167  DKLASFVAKNGRQFEDVTRQRNPGDTPFKFLFDEGCADYKYYEYRLAEEEKTLSQTRDSQ 226

Query: 1029 T--RSGSSNTSGFKASNGSQKS---QSNYQTPASALYEANEDTPQAGSN---------SY 1166
            T    G ++TS  K+++GSQ+S   +SNYQ P SALYEA EDT  +GS+          Y
Sbjct: 227  TSQSGGGTSTSAPKSTSGSQRSVQQRSNYQIPTSALYEATEDTRASGSSVQAALAGRAGY 286

Query: 1167 GERSAPSASDPIAMMEFYMKKAAHEERRRQPKQSKDEMPPPASLHAASGKKGHHMGDYIP 1346
            GE SAP+ +DPIAMMEFYMKKAA EERRRQPKQSKDEMPPPASL    GKKGHHMGDYIP
Sbjct: 287  GESSAPTGADPIAMMEFYMKKAAQEERRRQPKQSKDEMPPPASLQ-TPGKKGHHMGDYIP 345

Query: 1347 LEELEKFMANCNDVXXXXXXXXXXXRSKIQADNVGHKLLSKMXXXXXXXXXXXXXXRADP 1526
             EELEKF++ CND            R+KIQADNVGHKLLSKM               ADP
Sbjct: 346  QEELEKFLSTCNDAAAQKAAREAAERAKIQADNVGHKLLSKMGWKEGEGLGSSRNGIADP 405

Query: 1527 VMAGNVKTNNLGVGAQAPSEVTPEDDIYEQYKKRMMLGYRYRPNPLGNPRKAYY 1688
            +MAGNVK +NLGVGAQ P EVT +DDIYEQYKKRMMLGYRYRPNPL NPRKAYY
Sbjct: 406  IMAGNVKLDNLGVGAQQPGEVTADDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 459


>ref|XP_003633594.1| PREDICTED: SURP and G-patch domain-containing protein 1-like
            protein-like isoform 2 [Vitis vinifera]
            gi|297736220|emb|CBI24858.3| unnamed protein product
            [Vitis vinifera]
          Length = 444

 Score =  496 bits (1278), Expect = e-138
 Identities = 278/472 (58%), Positives = 314/472 (66%), Gaps = 19/472 (4%)
 Frame = +3

Query: 330  MEKEKASSLFVNDGSFMERFKQLQQQ---QKNKGTAPEEPNP--IITPSSKQTSVITKVN 494
            MEK  A SLFVNDGSFMERFKQLQQ+   +K KG   EEP    ++  +S   S+ +K N
Sbjct: 1    MEKGAAPSLFVNDGSFMERFKQLQQENEKEKGKGAKLEEPKQRMVVPATSTPNSIPSKTN 60

Query: 495  FESKPIDTRKATPVSSSGKLAFSLKQKSKLVAAPVRLGADEDEDEGDVRDAPCDGPVKRQ 674
              SK   TRK    + +GKLAFSLKQKSKLV  PV+LGADEDE+E D  +   D P+KRQ
Sbjct: 61   NVSKTNGTRKTPLAAPNGKLAFSLKQKSKLVPPPVKLGADEDEEETDAGNLSSDAPMKRQ 120

Query: 675  KLGQQEASTLPSDHGDVAYALSIYXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXADK 854
            KLGQ+++S  PS   DVA                                       ADK
Sbjct: 121  KLGQKDSSEHPSPQVDVA---------------------------PPSPSDPAVKKVADK 153

Query: 855  LASFVAKNGRQFEHITRQRNPGDTPFKFLFDTGCADYKYYESRLIEEERLLAPTVDFQT- 1031
            LASFVAKNGRQFE +TRQRNPGDTPFKFLFD GCADYKYYE RL EEE+ L+ T D QT 
Sbjct: 154  LASFVAKNGRQFEDVTRQRNPGDTPFKFLFDEGCADYKYYEYRLAEEEKTLSQTRDSQTS 213

Query: 1032 -RSGSSNTSGFKASNGSQKS---QSNYQTPASALYEANEDTPQAGSN---------SYGE 1172
               G ++TS  K+++GSQ+S   +SNYQ P SALYEA EDT  +GS+          YGE
Sbjct: 214  QSGGGTSTSAPKSTSGSQRSVQQRSNYQIPTSALYEATEDTRASGSSVQAALAGRAGYGE 273

Query: 1173 RSAPSASDPIAMMEFYMKKAAHEERRRQPKQSKDEMPPPASLHAASGKKGHHMGDYIPLE 1352
             SAP+ +DPIAMMEFYMKKAA EERRRQPKQSKDEMPPPASL    GKKGHHMGDYIP E
Sbjct: 274  SSAPTGADPIAMMEFYMKKAAQEERRRQPKQSKDEMPPPASLQ-TPGKKGHHMGDYIPQE 332

Query: 1353 ELEKFMANCNDVXXXXXXXXXXXRSKIQADNVGHKLLSKMXXXXXXXXXXXXXXRADPVM 1532
            ELEKF++ CND            R+KIQADNVGHKLLSKM               ADP+M
Sbjct: 333  ELEKFLSTCNDAAAQKAAREAAERAKIQADNVGHKLLSKMGWKEGEGLGSSRNGIADPIM 392

Query: 1533 AGNVKTNNLGVGAQAPSEVTPEDDIYEQYKKRMMLGYRYRPNPLGNPRKAYY 1688
            AGNVK +NLGVGAQ P EVT +DDIYEQYKKRMMLGYRYRPNPL NPRKAYY
Sbjct: 393  AGNVKLDNLGVGAQQPGEVTADDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 444


>ref|XP_002513189.1| arginine/serine rich splicing factor sf4/14, putative [Ricinus
            communis] gi|223547687|gb|EEF49180.1| arginine/serine
            rich splicing factor sf4/14, putative [Ricinus communis]
          Length = 441

 Score =  454 bits (1167), Expect = e-125
 Identities = 262/473 (55%), Positives = 297/473 (62%), Gaps = 20/473 (4%)
 Frame = +3

Query: 330  MEKEKASSLFVNDGSFMERFKQLQQQQKNKGTAPEEPNPIITPSSKQTSVIT-------- 485
            M+K+  S+LFVNDGSFMERFKQLQQ+   KG  PE+    +   SK  ++I+        
Sbjct: 1    MDKKAPSTLFVNDGSFMERFKQLQQE---KGMDPEKDKLAVEKESKPKTIISGTLAPKPS 57

Query: 486  --KVNFESKPIDTRKATPVSSSGKLAFSLKQKSKLVAAPVRLGADEDEDEGDVRDAPCDG 659
              K++ + K  +  K     S GKLAFSLKQKSK+V   V+LG  EDED+ DV +   D 
Sbjct: 58   TGKISLQFKANNANKTPQPPSGGKLAFSLKQKSKIVTPVVKLG--EDEDDADVGNVSGDA 115

Query: 660  PVKRQKLGQQEASTLPSDHGDVAYALSIYXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXX 839
              KRQKL Q ++S L S   DVA                                     
Sbjct: 116  SAKRQKLSQSDSSELSSKQVDVA---------------------------PLSPSDPTVK 148

Query: 840  XXADKLASFVAKNGRQFEHITRQRNPGDTPFKFLFDTGCADYKYYESRLIEEERLLAPTV 1019
              ADKLASFVAKNGRQFEHITRQ+NPGDTPFKFLFD  C+DYKYYE RL EEER L+ T 
Sbjct: 149  KVADKLASFVAKNGRQFEHITRQKNPGDTPFKFLFDKTCSDYKYYEFRLAEEERALSQTG 208

Query: 1020 DFQTR-SGSSNTSGFKASNGSQKS---QSNYQTPASALYEANEDT----PQAGSNSYGER 1175
            D +   SG+++ S  K S+GSQ+S   Q NYQ PASALY+A ++       A   S G  
Sbjct: 209  DSENSPSGATSPSASKFSSGSQRSHQQQPNYQIPASALYDATDEPGGSLTSAQIASVGRA 268

Query: 1176 SAPSASDPIAMMEFYMKKAAHEERRRQPKQSKDEMPPPASLHA--ASGKKGHHMGDYIPL 1349
               S +DPIAMMEFYMKKAA EERRRQPKQSKDEMPPP SL    AS K+GHHMGDYIP 
Sbjct: 269  GDSSGTDPIAMMEFYMKKAAQEERRRQPKQSKDEMPPPPSLQGPGASSKRGHHMGDYIPQ 328

Query: 1350 EELEKFMANCNDVXXXXXXXXXXXRSKIQADNVGHKLLSKMXXXXXXXXXXXXXXRADPV 1529
            EELEKF+A CND            RSKIQADNVGHKLLSKM               ADP+
Sbjct: 329  EELEKFLATCNDAAAQRAAKESAERSKIQADNVGHKLLSKMGWKEGEGLGSARSGIADPI 388

Query: 1530 MAGNVKTNNLGVGAQAPSEVTPEDDIYEQYKKRMMLGYRYRPNPLGNPRKAYY 1688
             AGNVKTNNLGVGA  P EVTPEDDIYEQYKKRMMLGYRYRPNPL NPRKAYY
Sbjct: 389  KAGNVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 441


>ref|XP_002314024.1| predicted protein [Populus trichocarpa] gi|222850432|gb|EEE87979.1|
            predicted protein [Populus trichocarpa]
          Length = 441

 Score =  447 bits (1149), Expect = e-123
 Identities = 257/468 (54%), Positives = 302/468 (64%), Gaps = 15/468 (3%)
 Frame = +3

Query: 330  MEKEKASSLFVNDGSFMERFKQLQQ-----QQKNKGTAPEEPNP--IITPSSKQTSVITK 488
            M+K   SSLFVNDGSFME+FKQLQQ     Q+K+KG A ++  P  I++ +        K
Sbjct: 1    MDKGAPSSLFVNDGSFMEKFKQLQQGNGKEQEKDKGAAEKDSKPKTIVSGTVTPKPSFGK 60

Query: 489  VNFESKPIDTRKATPVSSSGKLAFSLKQKSKLVAAPVRLGAD-EDEDEGDVRDAPCDGPV 665
            V  + K  D  K +  +SSGKLAFSLKQKSKLVA  V+LG D EDEDE D  +       
Sbjct: 61   VTMQFKTNDASKTSQTASSGKLAFSLKQKSKLVAPAVKLGEDDEDEDEADAVNTSGGVSA 120

Query: 666  KRQKLGQQEASTLPSDHGDVAYALSIYXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXX 845
            KRQKLGQ +AS       DVA                                       
Sbjct: 121  KRQKLGQLDASEQSLKRLDVA---------------------------PPPPSDPTVKNV 153

Query: 846  ADKLASFVAKNGRQFEHITRQRNPGDTPFKFLFDTGCADYKYYESRLIEEERLLAPTVDF 1025
            ADKLASFVAK+GRQFE++TRQ+NPGDTPFKFLFD  CAD+KYY+ RL EEE+ L+   D 
Sbjct: 154  ADKLASFVAKHGRQFENVTRQKNPGDTPFKFLFDENCADFKYYQYRLAEEEKALSQNRDS 213

Query: 1026 Q-TRSGSSNTSGFKASNGSQKSQ---SNYQTPASALYEANEDTPQAGSNSYG---ERSAP 1184
              + SG ++TS  K++  S++SQ   SNYQ PASALYEA E+   + S S G   E SAP
Sbjct: 214  HISSSGGTSTSASKSTGSSRRSQQQQSNYQIPASALYEAAEEPKGSLSTSSGRAGESSAP 273

Query: 1185 SASDPIAMMEFYMKKAAHEERRRQPKQSKDEMPPPASLHAASGKKGHHMGDYIPLEELEK 1364
            + +DPI MMEFYMKKAA EERRRQPK SKDEMPPPASL AAS  KGHHMGDYIP EELEK
Sbjct: 274  AGTDPIEMMEFYMKKAAQEERRRQPKLSKDEMPPPASLQAASSLKGHHMGDYIPPEELEK 333

Query: 1365 FMANCNDVXXXXXXXXXXXRSKIQADNVGHKLLSKMXXXXXXXXXXXXXXRADPVMAGNV 1544
            F+A CNDV           R++IQADNVGHKLLSKM               ++P+MAGNV
Sbjct: 334  FLATCNDVAATKAAKEAAERARIQADNVGHKLLSKMGWKEGEGLGSSRSGISNPIMAGNV 393

Query: 1545 KTNNLGVGAQAPSEVTPEDDIYEQYKKRMMLGYRYRPNPLGNPRKAYY 1688
            K ++LGVGA  P EV+P+DDIYEQYKKRMMLGYR+RPNPL NPRKAYY
Sbjct: 394  KKDHLGVGAHNPGEVSPDDDIYEQYKKRMMLGYRHRPNPLNNPRKAYY 441


>ref|XP_003546875.1| PREDICTED: SURP and G-patch domain-containing protein 1-like
            protein-like [Glycine max]
          Length = 436

 Score =  441 bits (1135), Expect = e-121
 Identities = 256/466 (54%), Positives = 294/466 (63%), Gaps = 13/466 (2%)
 Frame = +3

Query: 330  MEKEKASSLFVNDGSFMERFKQLQQQQ-KNKGTAPEEPNPI--ITPSSKQTSVITKVNFE 500
            M+K    SLFVNDGSFMERFKQLQQ+Q K K    E+  PI  I+ S       TK   +
Sbjct: 1    MDKGVPPSLFVNDGSFMERFKQLQQEQDKGKNVKLEDSKPIKVISGSLSPNPSFTKTPVD 60

Query: 501  SKPIDTRKATPVSSSGKLAFSLKQKSKLVAAPVRLGADEDEDEGDVRDAPCDGPVKRQKL 680
             K  DTRK +   SSGKLAFSLKQKSKLV  PV+L ADEDE+E +      D P+KRQKL
Sbjct: 61   LKVNDTRKISQGGSSGKLAFSLKQKSKLVPPPVKLSADEDEEETEAGYVSNDAPLKRQKL 120

Query: 681  GQQEASTLPSDHGDVAYALSIYXXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXADKLA 860
            GQ+E     S   DVA                                       ADKLA
Sbjct: 121  GQEEGIDQSSRQLDVA---------------------------PHSPSDPTVKKVADKLA 153

Query: 861  SFVAKNGRQFEHITRQRNPGDTPFKFLFDTGCADYKYYESRLIEEERLLAPTVDFQT-RS 1037
            SFVAKNGRQFE +TRQ+NPGDTPFKFLFD  CA+YKYYE RL +EE  L  + + Q  R+
Sbjct: 154  SFVAKNGRQFEDVTRQKNPGDTPFKFLFDERCAEYKYYEYRLAQEENALVQSRESQVPRN 213

Query: 1038 GSSNTSGFKASNGSQKS--QSNYQTPASALYEANEDTPQAG----SNSYGERSAPSAS-- 1193
            G ++TS  K +NG Q+S  Q  YQ PASALYE+ ++   +G    ++S G    PS S  
Sbjct: 214  GGTSTSSSKQTNGHQRSSQQHTYQIPASALYESADNPRASGFSIQTSSVGSSEEPSGSSN 273

Query: 1194 -DPIAMMEFYMKKAAHEERRRQPKQSKDEMPPPASLHAASGKKGHHMGDYIPLEELEKFM 1370
             D +A+MEFYMKKAA EE+ +QPK SKDEMPPPASL    GKKGHHMGD+IP EELEKF+
Sbjct: 274  ADSLALMEFYMKKAAREEKYKQPKHSKDEMPPPASL---LGKKGHHMGDFIPPEELEKFL 330

Query: 1371 ANCNDVXXXXXXXXXXXRSKIQADNVGHKLLSKMXXXXXXXXXXXXXXRADPVMAGNVKT 1550
            A CND            R+KIQADNVGH+LLSKM               ADP+MAGNVK 
Sbjct: 331  ATCNDAAAQKAAMEAAERAKIQADNVGHRLLSKMGWKEGEGLGGSRKGIADPIMAGNVKK 390

Query: 1551 NNLGVGAQAPSEVTPEDDIYEQYKKRMMLGYRYRPNPLGNPRKAYY 1688
            NNLGVGAQ P EV+ EDDIYEQYKKRMMLGYRYRPNPL NPRKAYY
Sbjct: 391  NNLGVGAQEPGEVSAEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 436


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