BLASTX nr result

ID: Coptis21_contig00003383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003383
         (1361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272219.1| PREDICTED: gibberellin 2-beta-dioxygenase 1-...   238   3e-60
ref|XP_003519400.1| PREDICTED: uncharacterized protein LOC100785...   230   7e-58
ref|XP_003616656.1| Gibberellin 2-beta-dioxygenase [Medicago tru...   224   3e-56
ref|XP_002528301.1| conserved hypothetical protein [Ricinus comm...   223   7e-56
ref|XP_002311230.1| 2-oxoglutarate-dependent dioxygenase [Populu...   221   3e-55

>ref|XP_002272219.1| PREDICTED: gibberellin 2-beta-dioxygenase 1-like [Vitis vinifera]
          Length = 382

 Score =  238 bits (607), Expect = 3e-60
 Identities = 151/396 (38%), Positives = 199/396 (50%), Gaps = 17/396 (4%)
 Frame = -2

Query: 1327 MASSAENHQPHSATYGXXXXXXXXXXXXTNCLSTNDAADXXXXXXXXXXXXXXXXXXXXX 1148
            MASSA  H P    YG             + +ST+DAAD                     
Sbjct: 1    MASSA--HTPPPNPYGTTVAPPPTPSTQPSHVSTSDAADAISRLFQRLPPALSLPTRASP 58

Query: 1147 XXXXXXXXXXXPQNTSFLDPYLSSFSQLGFFQLTNHPIPSQXXXXXXXXXXXLFNLSKTQ 968
                        QN + L   LS  SQ GFFQL +HPIPSQ           LF+L + Q
Sbjct: 59   RATSPPSISFSDQNLNLLSDLLSFSSQHGFFQLIDHPIPSQLARSAESESLALFDLPRPQ 118

Query: 967  KHQSFSNTWPLGYDEGDDNNNMEEGGPIESFCFDXXXXXXXXXXXXXXXXXXXXXXXXXX 788
            K  SF   WPLG+D  +D    EE G  E+FC +                          
Sbjct: 119  KQHSFPKNWPLGFDADED----EEDGAGEAFCLESSCSTESTHLSLSSLREFTRAME--- 171

Query: 787  XXEKVGTEVVEALSSAMGFSKRLKEKDIQFSSLMWVSEGVVGNKQMISGRFYPYIIALQY 608
               K+G +V+++L+ A+GF    +    +   LMW+SE V GNK  +SGR YPYII LQY
Sbjct: 172  ---KLGLDVLDSLARAVGFENPFRSGSNRVCPLMWISEDVPGNKPDLSGRVYPYIIGLQY 228

Query: 607  QITCWKYSVLTDSGWSSVSPQVDSVLVTVGDIAQVWSNGKLKKVRGRPVATSGND---NS 437
            QIT  K+S+L DSGW +VSP+VDSV+VTVGDIAQVWSNGKLKKVRGR V   G++   +S
Sbjct: 229  QITSQKHSLLVDSGWITVSPRVDSVMVTVGDIAQVWSNGKLKKVRGRAVVNRGSEAGKSS 288

Query: 436  RFITMSXXXXXXXXXXXTISPFLPVI--------------SSHANDSANDEGQENDKVDK 299
            R ++M+            +SP LP++              +    ++ +  G   ++ ++
Sbjct: 289  RSVSMA-LLLTLPLDTPNVSP-LPLLPHLPPADHETQPHKAEEQTEAGSTSGTSKEEEEE 346

Query: 298  VTQEKMIFDTFSFEDYAWRVYHERFLFKDPLDRYLI 191
               E+ +F +FSFEDYAWR+YHER L KDPLDRY I
Sbjct: 347  EDDERPLFRSFSFEDYAWRIYHERLLLKDPLDRYRI 382


>ref|XP_003519400.1| PREDICTED: uncharacterized protein LOC100785042 [Glycine max]
          Length = 360

 Score =  230 bits (586), Expect = 7e-58
 Identities = 135/306 (44%), Positives = 177/306 (57%), Gaps = 4/306 (1%)
 Frame = -2

Query: 1096 LDPYLSSFSQLGFFQLTNHPIPSQXXXXXXXXXXXLFNLSKTQKHQSFSNTWPLGYDEGD 917
            L+  LS  S+LG+ QLT+H +PS+           LF+LS+ QK   F   WPLGY   +
Sbjct: 68   LNDVLSCVSKLGYAQLTDHSVPSELANSAESEALALFDLSQDQKQSLFPKNWPLGYGNDE 127

Query: 916  DNNNMEEGGPIESFCFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKVGTEVVEALSSAM 737
            D    +E G  +SF FD                             K+G  +V+ L+  +
Sbjct: 128  DE---DEDGVADSFRFDSACSTESSELALFSLRKFARELE------KLGLMIVDELTKDL 178

Query: 736  GFSKRLKEKDIQFSSLMWVSEGVVGNKQMISGRFYPYIIALQYQITCWKYSVLTDSGWSS 557
            G    L +   +  S+MWVSE + GNK   SG FYP++I LQYQI   KYS+L+DSGW S
Sbjct: 179  GCENPLGDDPTRVCSVMWVSESLPGNK---SGGFYPFVIGLQYQIRNQKYSLLSDSGWVS 235

Query: 556  VSPQVDSVLVTVGDIAQVWSNGKLKKVRGRPVATSGNDN-SRFITMSXXXXXXXXXXXTI 380
            V P VDS+LVT GDIAQVWSNGKLKKVRGRP+AT G++N SR ITMS            +
Sbjct: 236  VLPHVDSILVTFGDIAQVWSNGKLKKVRGRPMATVGDENGSRCITMS--LLITLPTDSRV 293

Query: 379  SPFLPVISSHANDSAND-EGQENDKVDKVTQ--EKMIFDTFSFEDYAWRVYHERFLFKDP 209
            +P LP ++ + +    + EG+E +  D   +  EK +F++F FEDYAWRVYHER LFKDP
Sbjct: 294  APLLPKVTCNKDQKEEEIEGEEEENNDGGDEELEKRVFNSFDFEDYAWRVYHERILFKDP 353

Query: 208  LDRYLI 191
            LDRY +
Sbjct: 354  LDRYRV 359


>ref|XP_003616656.1| Gibberellin 2-beta-dioxygenase [Medicago truncatula]
            gi|355517991|gb|AES99614.1| Gibberellin
            2-beta-dioxygenase [Medicago truncatula]
          Length = 379

 Score =  224 bits (572), Expect = 3e-56
 Identities = 133/301 (44%), Positives = 174/301 (57%), Gaps = 3/301 (0%)
 Frame = -2

Query: 1084 LSSFSQLGFFQLTNHPIPSQXXXXXXXXXXXLFNLSKTQKHQSFSNTWPLGYDEGDDNNN 905
            +SS SQLGF QLT+H + S+           LFNLS  QK   F   WP GY EGD++N+
Sbjct: 87   ISSISQLGFIQLTDHSVSSKLANLAESESLKLFNLSHDQKESFFPQNWPFGY-EGDNDND 145

Query: 904  MEEGGPIESFCFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKVGTEVVEALSSAMGFSK 725
             E+   +ESF F                              K+G  +++ L + +G   
Sbjct: 146  EEK--LVESFRFQFDSLCSTESNQIKLESLSEFACALE----KLGLNIIDVLMNGLGVEN 199

Query: 724  RLKEKDIQFSSLMWVSEGVVGNKQMISGRFYPYIIALQYQITCWKYSVLTDS-GWSSVSP 548
             + +   +FSS+MWVSE + GNK    G FYP+I+ LQYQI C KYS+L+DS GW SV P
Sbjct: 200  PVGDDSNRFSSIMWVSECLPGNKPGSMGGFYPFIVGLQYQIRCQKYSLLSDSGGWVSVLP 259

Query: 547  QVDSVLVTVGDIAQVWSNGKLKKVRGRPV-ATSGNDN-SRFITMSXXXXXXXXXXXTISP 374
             VDS+LVTVGD+AQVWSNGKLKKVRGRP+ A  G++N S  ITMS            ++P
Sbjct: 260  HVDSILVTVGDVAQVWSNGKLKKVRGRPIMAALGDENDSSCITMS--LLITLPLESNVAP 317

Query: 373  FLPVISSHANDSANDEGQENDKVDKVTQEKMIFDTFSFEDYAWRVYHERFLFKDPLDRYL 194
             LP+ + +  +   D  +E + +    Q K +F++  FEDYAWRVYHER LFKDPLDRY 
Sbjct: 318  LLPIGNKNKVEDDIDNDEEENNIGGEGQ-KRVFNSIDFEDYAWRVYHERLLFKDPLDRYR 376

Query: 193  I 191
            I
Sbjct: 377  I 377


>ref|XP_002528301.1| conserved hypothetical protein [Ricinus communis]
            gi|223532256|gb|EEF34059.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 435

 Score =  223 bits (569), Expect = 7e-56
 Identities = 138/311 (44%), Positives = 175/311 (56%), Gaps = 10/311 (3%)
 Frame = -2

Query: 1093 DPYLSSFSQLGFFQLTNHPIPSQXXXXXXXXXXXLFNLSKTQKHQSFSNTWPLGYDEGDD 914
            D  LS+ SQ GFFQL  H IPS            LF L+K +K   F   WPLG+++ D+
Sbjct: 134  DHLLSACSQHGFFQLHKHNIPSHLANSAEVESLSLFKLAKDKKESYFPKNWPLGFNDDDE 193

Query: 913  NNNMEEGGPIESFCFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKVGTEVVEALSSAMG 734
              N E      SF  D                             K+G E +E LS A+G
Sbjct: 194  EGNGE------SFWLDGDCSASTELPTELSLSSLRELTRGLE---KLGLEAMEMLSKAVG 244

Query: 733  FSKRLKEKDIQFSSLMWVSEGVVGNK-QMISGRFYPYIIALQYQITCWKYSVLTDSGWSS 557
            F    K    + SS+M V EG  G+K   ISG FYPY++ LQY+I   KY +L DSGW +
Sbjct: 245  FENPFKAYPTRLSSMMSVHEGSYGDKPDHISGGFYPYVVGLQYEIRSRKYWLLADSGWVA 304

Query: 556  VSPQVDSVLVTVGDIAQVWSNGKLKKVRGRPVATSGN-DNSRFITMSXXXXXXXXXXXTI 380
            V PQVDSVLVTVGDIAQVWSNGKLK+VRGRP+   G+  +S  ITM+           TI
Sbjct: 305  VVPQVDSVLVTVGDIAQVWSNGKLKRVRGRPLPCMGDGKDSSCITMT--LLLTLPTETTI 362

Query: 379  SPFLPVISSH--ANDSANDEGQENDKVDK------VTQEKMIFDTFSFEDYAWRVYHERF 224
            SP LP + +H  A+D   +E +E ++ D+      V +EK +F++FSFEDYAWRVYHE F
Sbjct: 363  SPLLPELDTHNSADDEVREEEEEEEEEDEKDGKNVVKKEKRMFNSFSFEDYAWRVYHEPF 422

Query: 223  LFKDPLDRYLI 191
            +FKDPLD+Y I
Sbjct: 423  IFKDPLDKYRI 433


>ref|XP_002311230.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa]
            gi|222851050|gb|EEE88597.1| 2-oxoglutarate-dependent
            dioxygenase [Populus trichocarpa]
          Length = 357

 Score =  221 bits (563), Expect = 3e-55
 Identities = 135/307 (43%), Positives = 172/307 (56%), Gaps = 6/307 (1%)
 Frame = -2

Query: 1093 DPYLSSFSQLGFFQLTNHPIPSQXXXXXXXXXXXLFNLSKTQKHQSFSNTWPLGYDEGDD 914
            D   S+ SQ G+FQLTNH IPS+           LF+L+K +K   F   WPLG++  +D
Sbjct: 66   DLLFSASSQRGYFQLTNHNIPSKIATSAELESVSLFDLAKDKKESYFPKNWPLGFEGDED 125

Query: 913  NNNMEEGGPIESFCFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKVGTEVVEALSSAMG 734
             N        ESF  D                             K+G EV++ LS+  G
Sbjct: 126  GNG-------ESFWLDAECSTVSTELVLASLRELTRALE------KLGLEVIQMLSNGAG 172

Query: 733  FSKRLKEKDIQFSSLMWVSEGVVGN--KQMISGRFYPYIIALQYQITCWKYSVLTDSGWS 560
            F   LKE   +  SL+ +  G+ GN  K  +SG  YPYI+ LQYQI C KYS+LTDSGW 
Sbjct: 173  FENPLKEHPTRNYSLLCLHGGLDGNDDKPGLSGGSYPYIVGLQYQIRCQKYSLLTDSGWV 232

Query: 559  SVSPQVDSVLVTVGDIAQVWSNGKLKKVRGRPVATSGN-DNSRFITMSXXXXXXXXXXXT 383
            +V PQVDS++VTVGDIAQVWSNGKLKKVRGRP A  G+ +NSR I+MS           T
Sbjct: 233  TVLPQVDSIMVTVGDIAQVWSNGKLKKVRGRPKACLGDCENSRCISMS--LLVTLPSEST 290

Query: 382  ISPFLPVISS---HANDSANDEGQENDKVDKVTQEKMIFDTFSFEDYAWRVYHERFLFKD 212
            +SP LP + +   +AN+    E +E D +  V +    F +F F+DYAWRVYH   LFKD
Sbjct: 291  VSPLLPKVITDGINANEDEIREDEEQDNIHSVCKTGRRFGSFPFDDYAWRVYHGPLLFKD 350

Query: 211  PLDRYLI 191
            PLD+Y I
Sbjct: 351  PLDKYRI 357


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