BLASTX nr result

ID: Coptis21_contig00003381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003381
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135715.1| PREDICTED: UPF0197 transmembrane protein C11...    82   8e-14
emb|CAE75665.1| hypothetical protein [Gossypium hirsutum]              80   2e-13
emb|CBI27908.3| unnamed protein product [Vitis vinifera]               80   4e-13
ref|XP_002282032.1| PREDICTED: UPF0197 transmembrane protein C11...    80   4e-13
ref|XP_002331450.1| predicted protein [Populus trichocarpa] gi|1...    76   4e-12

>ref|XP_004135715.1| PREDICTED: UPF0197 transmembrane protein C11orf10-like [Cucumis
           sativus] gi|449489875|ref|XP_004158446.1| PREDICTED:
           UPF0197 transmembrane protein C11orf10-like [Cucumis
           sativus]
          Length = 76

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 38/53 (71%), Positives = 46/53 (86%)
 Frame = -2

Query: 541 KPITSPIAVAYYPSLAVVMIGIGLIVTASFFIYEATSSKKNRSFTKELIAGTV 383
           KP+TSP+  A+YP+LAV+MI +GLIVTASFFIYEATSS+KNRS  KEL  GT+
Sbjct: 4   KPVTSPVPEAWYPTLAVLMISVGLIVTASFFIYEATSSRKNRSLAKELTRGTI 56


>emb|CAE75665.1| hypothetical protein [Gossypium hirsutum]
          Length = 78

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 38/54 (70%), Positives = 47/54 (87%)
 Frame = -2

Query: 544 AKPITSPIAVAYYPSLAVVMIGIGLIVTASFFIYEATSSKKNRSFTKELIAGTV 383
           AKPITSP++ A+YP+LA++M+ IGL+VTASFFIYEATSSK+NR   KELI G V
Sbjct: 5   AKPITSPVSDAWYPTLALLMLSIGLVVTASFFIYEATSSKRNRCLAKELITGGV 58


>emb|CBI27908.3| unnamed protein product [Vitis vinifera]
          Length = 128

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 36/54 (66%), Positives = 47/54 (87%)
 Frame = -2

Query: 544 AKPITSPIAVAYYPSLAVVMIGIGLIVTASFFIYEATSSKKNRSFTKELIAGTV 383
           AKPITSP+  A+YP+LAV+M+ +GL++TASFFIYEATSS+K+RS  KEL  GT+
Sbjct: 55  AKPITSPVPDAWYPTLAVLMLAVGLVITASFFIYEATSSRKSRSLAKELTTGTM 108


>ref|XP_002282032.1| PREDICTED: UPF0197 transmembrane protein C11orf10-like [Vitis
           vinifera]
          Length = 78

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 36/54 (66%), Positives = 47/54 (87%)
 Frame = -2

Query: 544 AKPITSPIAVAYYPSLAVVMIGIGLIVTASFFIYEATSSKKNRSFTKELIAGTV 383
           AKPITSP+  A+YP+LAV+M+ +GL++TASFFIYEATSS+K+RS  KEL  GT+
Sbjct: 5   AKPITSPVPDAWYPTLAVLMLAVGLVITASFFIYEATSSRKSRSLAKELTTGTM 58


>ref|XP_002331450.1| predicted protein [Populus trichocarpa] gi|118485469|gb|ABK94590.1|
           unknown [Populus trichocarpa]
           gi|222873528|gb|EEF10659.1| predicted protein [Populus
           trichocarpa]
          Length = 78

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 37/58 (63%), Positives = 46/58 (79%)
 Frame = -2

Query: 556 MTFEAKPITSPIAVAYYPSLAVVMIGIGLIVTASFFIYEATSSKKNRSFTKELIAGTV 383
           M  +A  I+SP+ VA+YP+LAV M+ IGLIVTASFFIYEATSS++NRS  KEL  G +
Sbjct: 1   MGSKAAAISSPVPVAWYPTLAVFMLAIGLIVTASFFIYEATSSRRNRSLAKELTTGAI 58


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