BLASTX nr result

ID: Coptis21_contig00003380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003380
         (936 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB39248.1| NADP-isocitrate dehydrogenase [Eucalyptus globulus]    575   e-162
gb|ABA18651.1| cytosolic NADP+-isocitrate dehydrogenase [Populus...   573   e-161
dbj|BAI50641.1| NADP-dependent isocitrate dehydrogenase [Eucalyp...   573   e-161
ref|XP_002528517.1| NADP-specific isocitrate dehydrogenase, puta...   573   e-161
ref|XP_002327598.1| predicted protein [Populus trichocarpa] gi|2...   572   e-161

>gb|AAB39248.1| NADP-isocitrate dehydrogenase [Eucalyptus globulus]
          Length = 416

 Score =  575 bits (1482), Expect = e-162
 Identities = 275/297 (92%), Positives = 288/297 (96%)
 Frame = +3

Query: 45  MGSQKIKVTNPIVEMDGDEMTRVFWKSIKDKLIFPFLDLDIKYFDLGLPSRDATDDKVTI 224
           MG +KIKV NPIVEMDGDEMTRVFWKSIKDKLIFPFL+LDIKYFDLGLP RDATDDKVTI
Sbjct: 1   MGFEKIKVENPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPHRDATDDKVTI 60

Query: 225 ESAEATLKYNVAIKCATITPDEDRMKEFTLKSMWRSPNGTIRNILNGTVFREPIICRNVP 404
           ESAEATLKYNVAIKCATITPDE RMKEFTLK MW+SPNGTIRNILNGTVFREPI+C+N+P
Sbjct: 61  ESAEATLKYNVAIKCATITPDEARMKEFTLKQMWKSPNGTIRNILNGTVFREPIMCKNIP 120

Query: 405 RLVPGWTKPICIGRHAFGDQYRATDLVVKGAGKLKMVFVPEGQGEKTELEVYTFTGAGGV 584
           RLVPGW+KPICIGRHAFGDQY+ATD V+KGAGKLK+VFVPEG  EKTELEVY FTGAGGV
Sbjct: 121 RLVPGWSKPICIGRHAFGDQYKATDTVIKGAGKLKLVFVPEGTDEKTELEVYNFTGAGGV 180

Query: 585 ALSMYNTDESIRSFAEASMNTAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSK 764
           ALSMYNTDESIRSFAEASMNTAY+KKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSK
Sbjct: 181 ALSMYNTDESIRSFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSK 240

Query: 765 YEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVL 935
           +EAAGIWYEHRLIDDMVAYALKS+GGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVL
Sbjct: 241 FEAAGIWYEHRLIDDMVAYALKSDGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVL 297


>gb|ABA18651.1| cytosolic NADP+-isocitrate dehydrogenase [Populus tremula x Populus
           alba]
          Length = 420

 Score =  573 bits (1477), Expect = e-161
 Identities = 275/297 (92%), Positives = 287/297 (96%)
 Frame = +3

Query: 45  MGSQKIKVTNPIVEMDGDEMTRVFWKSIKDKLIFPFLDLDIKYFDLGLPSRDATDDKVTI 224
           M  +KIKV NPIVEMDGDEMTRVFW+SIK+KLIFPFL+LDIKYFDLGLP RDATDDKVTI
Sbjct: 1   MAFEKIKVANPIVEMDGDEMTRVFWQSIKEKLIFPFLELDIKYFDLGLPHRDATDDKVTI 60

Query: 225 ESAEATLKYNVAIKCATITPDEDRMKEFTLKSMWRSPNGTIRNILNGTVFREPIICRNVP 404
           ES+EATLKYNVAIKCATITPDEDR+KEF LK MW+SPNGTIRNILNGTVFREPIIC+NVP
Sbjct: 61  ESSEATLKYNVAIKCATITPDEDRVKEFKLKQMWKSPNGTIRNILNGTVFREPIICKNVP 120

Query: 405 RLVPGWTKPICIGRHAFGDQYRATDLVVKGAGKLKMVFVPEGQGEKTELEVYTFTGAGGV 584
           RLVPGWTK ICIGRHAFGDQYRATD V+KGAGKLK+VFVPEGQ EKTELEVY FTGAGGV
Sbjct: 121 RLVPGWTKAICIGRHAFGDQYRATDAVIKGAGKLKLVFVPEGQDEKTELEVYNFTGAGGV 180

Query: 585 ALSMYNTDESIRSFAEASMNTAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSK 764
           AL+MYNTDESIRSFAEASMNTAY+KKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSK
Sbjct: 181 ALAMYNTDESIRSFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSK 240

Query: 765 YEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVL 935
           YEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVL
Sbjct: 241 YEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVL 297


>dbj|BAI50641.1| NADP-dependent isocitrate dehydrogenase [Eucalyptus grandis x
           Eucalyptus urophylla]
          Length = 416

 Score =  573 bits (1476), Expect = e-161
 Identities = 274/297 (92%), Positives = 287/297 (96%)
 Frame = +3

Query: 45  MGSQKIKVTNPIVEMDGDEMTRVFWKSIKDKLIFPFLDLDIKYFDLGLPSRDATDDKVTI 224
           MG +KIKV NPIVEMDGDEMTRVFWKSIKDKLI PFL+LDIKYFDLGLP RDATDDKVTI
Sbjct: 1   MGFEKIKVENPIVEMDGDEMTRVFWKSIKDKLILPFLELDIKYFDLGLPHRDATDDKVTI 60

Query: 225 ESAEATLKYNVAIKCATITPDEDRMKEFTLKSMWRSPNGTIRNILNGTVFREPIICRNVP 404
           ESAEATLKYNVAIKCATITPDE RMKEFTLK MW+SPNGTIRNILNGTVFREPI+C+N+P
Sbjct: 61  ESAEATLKYNVAIKCATITPDEARMKEFTLKQMWKSPNGTIRNILNGTVFREPIMCKNIP 120

Query: 405 RLVPGWTKPICIGRHAFGDQYRATDLVVKGAGKLKMVFVPEGQGEKTELEVYTFTGAGGV 584
           RLVPGW+KPICIGRHAFGDQY+ATD V+KGAGKLK+VFVPEG  EKTELEVY FTGAGGV
Sbjct: 121 RLVPGWSKPICIGRHAFGDQYKATDTVIKGAGKLKLVFVPEGTDEKTELEVYNFTGAGGV 180

Query: 585 ALSMYNTDESIRSFAEASMNTAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSK 764
           ALSMYNTDESIRSFAEASMNTAY+KKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSK
Sbjct: 181 ALSMYNTDESIRSFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSK 240

Query: 765 YEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVL 935
           +EAAGIWYEHRLIDDMVAYALKS+GGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVL
Sbjct: 241 FEAAGIWYEHRLIDDMVAYALKSDGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVL 297


>ref|XP_002528517.1| NADP-specific isocitrate dehydrogenase, putative [Ricinus communis]
           gi|223532077|gb|EEF33886.1| NADP-specific isocitrate
           dehydrogenase, putative [Ricinus communis]
          Length = 413

 Score =  573 bits (1476), Expect = e-161
 Identities = 274/297 (92%), Positives = 287/297 (96%)
 Frame = +3

Query: 45  MGSQKIKVTNPIVEMDGDEMTRVFWKSIKDKLIFPFLDLDIKYFDLGLPSRDATDDKVTI 224
           M  +KIKV NPIVEMDGDEMTR+FWKSIKDKLIFPFL+LDIKYFDLGLP RDATDDKVTI
Sbjct: 1   MAFEKIKVANPIVEMDGDEMTRIFWKSIKDKLIFPFLELDIKYFDLGLPHRDATDDKVTI 60

Query: 225 ESAEATLKYNVAIKCATITPDEDRMKEFTLKSMWRSPNGTIRNILNGTVFREPIICRNVP 404
           ESAEATLKYNVAIKCATITPDE R+KEF LK MW+SPNGTIRNILNGTVFREPIIC+NVP
Sbjct: 61  ESAEATLKYNVAIKCATITPDEARVKEFNLKQMWKSPNGTIRNILNGTVFREPIICKNVP 120

Query: 405 RLVPGWTKPICIGRHAFGDQYRATDLVVKGAGKLKMVFVPEGQGEKTELEVYTFTGAGGV 584
           RLVPGWTKPICIGRHAFGDQYRATD V+KGAGKLK+VFVPEGQ EKTELEVY FTGAGGV
Sbjct: 121 RLVPGWTKPICIGRHAFGDQYRATDAVIKGAGKLKLVFVPEGQDEKTELEVYNFTGAGGV 180

Query: 585 ALSMYNTDESIRSFAEASMNTAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSK 764
           ALSMYNTDESIR+FA+ASMNTAY+KKWPLYLSTKNTILKKYDGRFKDIFQEVYEA+WKSK
Sbjct: 181 ALSMYNTDESIRAFADASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEASWKSK 240

Query: 765 YEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVL 935
           +EAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVL
Sbjct: 241 FEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVL 297


>ref|XP_002327598.1| predicted protein [Populus trichocarpa] gi|222836152|gb|EEE74573.1|
           predicted protein [Populus trichocarpa]
          Length = 414

 Score =  572 bits (1475), Expect = e-161
 Identities = 275/297 (92%), Positives = 286/297 (96%)
 Frame = +3

Query: 45  MGSQKIKVTNPIVEMDGDEMTRVFWKSIKDKLIFPFLDLDIKYFDLGLPSRDATDDKVTI 224
           M   KIKV NPIVEMDGDEMTRVFW+SIK+KLIFPFL+LDIKYFDLGLP RDATDDKVTI
Sbjct: 1   MAFVKIKVANPIVEMDGDEMTRVFWQSIKEKLIFPFLELDIKYFDLGLPHRDATDDKVTI 60

Query: 225 ESAEATLKYNVAIKCATITPDEDRMKEFTLKSMWRSPNGTIRNILNGTVFREPIICRNVP 404
           ESAEATLKYNVAIKCATITPDEDR+KEF LK MW+SPNGTIRNILNGTVFREPIIC+N+P
Sbjct: 61  ESAEATLKYNVAIKCATITPDEDRVKEFKLKQMWKSPNGTIRNILNGTVFREPIICKNIP 120

Query: 405 RLVPGWTKPICIGRHAFGDQYRATDLVVKGAGKLKMVFVPEGQGEKTELEVYTFTGAGGV 584
           RLVPGWTK ICIGRHAFGDQYRATD V+KGAGKLK+VFVPEGQ EKTELEVY FTGAGGV
Sbjct: 121 RLVPGWTKAICIGRHAFGDQYRATDAVIKGAGKLKLVFVPEGQDEKTELEVYNFTGAGGV 180

Query: 585 ALSMYNTDESIRSFAEASMNTAYEKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSK 764
           AL+MYNTDESIRSFAEASMNTAY+KKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSK
Sbjct: 181 ALAMYNTDESIRSFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSK 240

Query: 765 YEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVL 935
           YEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVL
Sbjct: 241 YEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVL 297


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