BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003366
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33742.3| unnamed protein product [Vitis vinifera]              160   8e-38
ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containi...   160   8e-38
emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]   160   8e-38
ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containi...   150   1e-34
ref|XP_002332237.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34

>emb|CBI33742.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  160 bits (406), Expect = 8e-38
 Identities = 76/92 (82%), Positives = 84/92 (91%)
 Frame = +2

Query: 2   WNVMIDGYTQHARPSESLGLFRKMLSAKVKPNEITVLSVLSACGQLGALESGKWMHSYIK 181
           WNVMIDGYTQ+  P+E+L LFR+ML AK KPNE+TVLSVLSACGQLGALESG+W+HSYI+
Sbjct: 158 WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIE 217

Query: 182 NNGIQINVHVGTALVDMYCKSGSLEDARLVFD 277
           NNGIQ NVHVGTALVDMY K GSLEDARLVFD
Sbjct: 218 NNGIQFNVHVGTALVDMYSKCGSLEDARLVFD 249


>ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  160 bits (406), Expect = 8e-38
 Identities = 76/92 (82%), Positives = 84/92 (91%)
 Frame = +2

Query: 2   WNVMIDGYTQHARPSESLGLFRKMLSAKVKPNEITVLSVLSACGQLGALESGKWMHSYIK 181
           WNVMIDGYTQ+  P+E+L LFR+ML AK KPNE+TVLSVLSACGQLGALESG+W+HSYI+
Sbjct: 224 WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIE 283

Query: 182 NNGIQINVHVGTALVDMYCKSGSLEDARLVFD 277
           NNGIQ NVHVGTALVDMY K GSLEDARLVFD
Sbjct: 284 NNGIQFNVHVGTALVDMYSKCGSLEDARLVFD 315



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/92 (30%), Positives = 48/92 (52%)
 Frame = +2

Query: 2   WNVMIDGYTQHARPSESLGLFRKMLSAKVKPNEITVLSVLSACGQLGALESGKWMHSYIK 181
           W  +I G+       ++L  + +ML+  V+PN  T  S+L  C     +E GK +HS   
Sbjct: 96  WTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQAV 151

Query: 182 NNGIQINVHVGTALVDMYCKSGSLEDARLVFD 277
             G   +++V T L+D+Y + G +  A+ +FD
Sbjct: 152 KLGFDSDLYVRTGLLDVYARGGDVVSAQQLFD 183


>emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  160 bits (406), Expect = 8e-38
 Identities = 76/92 (82%), Positives = 84/92 (91%)
 Frame = +2

Query: 2   WNVMIDGYTQHARPSESLGLFRKMLSAKVKPNEITVLSVLSACGQLGALESGKWMHSYIK 181
           WNVMIDGYTQ+  P+E+L LFR+ML AK KPNE+TVLSVLSACGQLGALESG+W+HSYI+
Sbjct: 171 WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIE 230

Query: 182 NNGIQINVHVGTALVDMYCKSGSLEDARLVFD 277
           NNGIQ NVHVGTALVDMY K GSLEDARLVFD
Sbjct: 231 NNGIQFNVHVGTALVDMYSKCGSLEDARLVFD 262



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/92 (30%), Positives = 48/92 (52%)
 Frame = +2

Query: 2   WNVMIDGYTQHARPSESLGLFRKMLSAKVKPNEITVLSVLSACGQLGALESGKWMHSYIK 181
           W  +I G+       ++L  + +ML+  V+PN  T  S+L  C     +E GK +HS   
Sbjct: 43  WTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQAV 98

Query: 182 NNGIQINVHVGTALVDMYCKSGSLEDARLVFD 277
             G   +++V T L+D+Y + G +  A+ +FD
Sbjct: 99  KLGFDSDLYVRTGLLDVYARGGDVVSAQQLFD 130


>ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
           gi|449513125|ref|XP_004164238.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
          Length = 645

 Score =  150 bits (378), Expect = 1e-34
 Identities = 72/92 (78%), Positives = 80/92 (86%)
 Frame = +2

Query: 2   WNVMIDGYTQHARPSESLGLFRKMLSAKVKPNEITVLSVLSACGQLGALESGKWMHSYIK 181
           WNVMI GY Q   P+ESL LFR+ML AK  PNE+TVL+VLSACGQLGALESG+W+HSYI+
Sbjct: 241 WNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIE 300

Query: 182 NNGIQINVHVGTALVDMYCKSGSLEDARLVFD 277
           N GIQINVHVGTAL+DMY K GSLEDARLVFD
Sbjct: 301 NKGIQINVHVGTALIDMYSKCGSLEDARLVFD 332



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   WNVMIDGYTQHARPSESLGLFRKMLSAKVKPNEITVLSVLSACGQLGALESGKWMHSYIK 181
           WN MI GY  H     +L LF +M     KP +IT + +LSACG  G +E G+     ++
Sbjct: 342 WNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMR 401

Query: 182 NN-GIQINVHVGTALVDMYCKSGSLEDA 262
           +  GI+  +     +V++  ++G LE+A
Sbjct: 402 DKYGIEPKIEHYGCMVNLLGRAGHLEEA 429



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/92 (34%), Positives = 51/92 (55%)
 Frame = +2

Query: 2   WNVMIDGYTQHARPSESLGLFRKMLSAKVKPNEITVLSVLSACGQLGALESGKWMHSYIK 181
           ++ +I  + Q      + G + +MLS  V+PN  T  SVL +C    +LESGK +H    
Sbjct: 113 FSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSC----SLESGKVLHCQAI 168

Query: 182 NNGIQINVHVGTALVDMYCKSGSLEDARLVFD 277
             G+  +++V T LVD+Y + G +  AR +FD
Sbjct: 169 KLGLGSDLYVRTGLVDVYARGGDVVCARQLFD 200


>ref|XP_002332237.1| predicted protein [Populus trichocarpa] gi|222831850|gb|EEE70327.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  149 bits (376), Expect = 2e-34
 Identities = 69/92 (75%), Positives = 82/92 (89%)
 Frame = +2

Query: 2   WNVMIDGYTQHARPSESLGLFRKMLSAKVKPNEITVLSVLSACGQLGALESGKWMHSYIK 181
           WNVMIDGY QH  P+E L LFR+ML+AKV+PNE+TVL+VLSACGQ GALE+G+W+HSYI+
Sbjct: 40  WNVMIDGYAQHGLPNEGLLLFRQMLNAKVRPNEVTVLAVLSACGQTGALETGRWVHSYIE 99

Query: 182 NNGIQINVHVGTALVDMYCKSGSLEDARLVFD 277
           NNGI INV VGT+L+DMY K GSLEDARLVF+
Sbjct: 100 NNGIGINVRVGTSLIDMYSKCGSLEDARLVFE 131



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
 Frame = +2

Query: 2   WNVMIDGYTQHARPSESLGLFRKMLSAKVKPNEITVLSVLSACGQLGALESG-KWMHSYI 178
           WN M+ GY  H    ++L LF++M     +P +IT + VL+AC   G +  G K+ +S  
Sbjct: 141 WNSMVVGYAMHGFSQDALRLFKEMCMIGYQPTDITFIGVLNACSHAGLVSEGWKFFYSMK 200

Query: 179 KNNGIQINVHVGTALVDMYCKSGSLEDA 262
              GI+  V     +V++  ++G LE+A
Sbjct: 201 DEYGIEPKVEHYGCMVNLLGRAGYLEEA 228