BLASTX nr result

ID: Coptis21_contig00003360 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003360
         (924 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76860.1| unknown [Picea sitchensis]                             125   1e-26
ref|XP_002269040.1| PREDICTED: uncharacterized protein LOC100246...   113   7e-23
ref|XP_002316436.1| predicted protein [Populus trichocarpa] gi|2...   111   3e-22
ref|XP_002887759.1| hypothetical protein ARALYDRAFT_477053 [Arab...   108   2e-21
gb|AAC83022.1| EST gb|R65024 comes from this gene [Arabidopsis t...   105   1e-20

>gb|ADE76860.1| unknown [Picea sitchensis]
          Length = 166

 Score =  125 bits (315), Expect = 1e-26
 Identities = 67/137 (48%), Positives = 95/137 (69%), Gaps = 2/137 (1%)
 Frame = -2

Query: 920 STQSENKGG-QLIEVDLEPTATANPETNELLGGMRRLEDAIHGIIVRRSAPDWLPFIPGS 744
           S++ +++GG QLIEVDL  +A  N E +  + G++RLEDAIHGI+VRR+APDWLPF+PG+
Sbjct: 38  SSRKDSEGGSQLIEVDLGDSAAENGENSSEVFGIQRLEDAIHGILVRRAAPDWLPFLPGA 97

Query: 743 SYWVPPRKRPYGLVELVGKLANPXXXXXXXXXXSV-RGWPSSSFFVDDGFVTAGASPYPV 567
           SYWVPPRK    LVEL+G+L+N           +  RGWPSS++F++      G SP+ V
Sbjct: 98  SYWVPPRKNNGSLVELLGRLSNNSMTQEESLSFTTSRGWPSSAYFIE------GGSPHQV 151

Query: 566 EMETNSINATQSEDEEG 516
           E+   ++   +SE+EEG
Sbjct: 152 EVV--AVQNNKSEEEEG 166


>ref|XP_002269040.1| PREDICTED: uncharacterized protein LOC100246130 [Vitis vinifera]
          Length = 161

 Score =  113 bits (282), Expect = 7e-23
 Identities = 69/140 (49%), Positives = 89/140 (63%), Gaps = 4/140 (2%)
 Frame = -2

Query: 923 RSTQSENK----GGQLIEVDLEPTATANPETNELLGGMRRLEDAIHGIIVRRSAPDWLPF 756
           RS   EN+     G L E+DLE    ++P+   L   + +L+DAI  I V+++ PDWLPF
Sbjct: 34  RSNSPENRFLTENGFLTELDLE---ASDPDLEILR--ILKLDDAIDQIHVKKATPDWLPF 88

Query: 755 IPGSSYWVPPRKRPYGLVELVGKLANPXXXXXXXXXXSVRGWPSSSFFVDDGFVTAGASP 576
           +PGSS+WVPPR R  GL +LVGKLA            +VRGWPSSS+FV+      GASP
Sbjct: 89  VPGSSFWVPPRGRFSGLADLVGKLAYVLSEDEAMSLTTVRGWPSSSYFVN------GASP 142

Query: 575 YPVEMETNSINATQSEDEEG 516
           +  E+ET S NA+QSEDEEG
Sbjct: 143 HS-EVETTSNNASQSEDEEG 161


>ref|XP_002316436.1| predicted protein [Populus trichocarpa] gi|222865476|gb|EEF02607.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score =  111 bits (277), Expect = 3e-22
 Identities = 58/109 (53%), Positives = 70/109 (64%), Gaps = 6/109 (5%)
 Frame = -2

Query: 824 MRRLEDAIHGIIVRRSAPDWLPFIPGSSYWVPPRKR---PYGLVELVGKLANPXXXXXXX 654
           +R+LEDAIHGIIVRR+APDWLPF+PGSSYWVPP +      G+  LV KLANP       
Sbjct: 59  LRKLEDAIHGIIVRRAAPDWLPFLPGSSYWVPPPRSASGSLGIAHLVEKLANPLSDEESL 118

Query: 653 XXXSVRGWPSSSFFV---DDGFVTAGASPYPVEMETNSINATQSEDEEG 516
              +VRGWPSS +FV       V    +   VE +T + N +QSEDEEG
Sbjct: 119 STSTVRGWPSSDYFVKGASSQLVEVKLNSKKVEADTTTSNTSQSEDEEG 167


>ref|XP_002887759.1| hypothetical protein ARALYDRAFT_477053 [Arabidopsis lyrata subsp.
           lyrata] gi|297333600|gb|EFH64018.1| hypothetical protein
           ARALYDRAFT_477053 [Arabidopsis lyrata subsp. lyrata]
          Length = 152

 Score =  108 bits (270), Expect = 2e-21
 Identities = 60/135 (44%), Positives = 81/135 (60%), Gaps = 1/135 (0%)
 Frame = -2

Query: 920 STQSENKGGQLIEVDLEPTATANPETNELLGGMRRLEDAIHGIIVRRSAPDWLPFIPGSS 741
           S +  N+ G++ E+D+     A+P        + +LEDA+H I+VRRSAPDWLPF+PG+S
Sbjct: 35  SNRRFNRFGEIYEIDI----AADPL-------LHKLEDAVHRIMVRRSAPDWLPFVPGAS 83

Query: 740 YWV-PPRKRPYGLVELVGKLANPXXXXXXXXXXSVRGWPSSSFFVDDGFVTAGASPYPVE 564
           YWV PPR + +G+ +LV KLANP          SVRGWP S +F+       G  P  VE
Sbjct: 84  YWVPPPRSQTHGIAKLVEKLANPISDEESISISSVRGWPCSDYFI------KGVKPQSVE 137

Query: 563 METNSINATQSEDEE 519
            E  S  A+ S+DEE
Sbjct: 138 TEMTSNTASDSDDEE 152


>gb|AAC83022.1| EST gb|R65024 comes from this gene [Arabidopsis thaliana]
          Length = 156

 Score =  105 bits (263), Expect = 1e-20
 Identities = 61/132 (46%), Positives = 77/132 (58%), Gaps = 1/132 (0%)
 Frame = -2

Query: 911 SENKGGQLIEVDLEPTATANPETNELLGGMRRLEDAIHGIIVRRSAPDWLPFIPGSSYWV 732
           + N  G + E+D+     A+P  N       +LEDA+H I+VRRSAPDWLPF+PG+S+WV
Sbjct: 41  NSNHLGVIYEIDI----AADPLVN-------KLEDAVHRIMVRRSAPDWLPFVPGASFWV 89

Query: 731 -PPRKRPYGLVELVGKLANPXXXXXXXXXXSVRGWPSSSFFVDDGFVTAGASPYPVEMET 555
            PPR + +G+ +LV KLANP          SVRGWP S     D F+  G  P  VE E 
Sbjct: 90  PPPRSQSHGIAKLVEKLANPISDEESISISSVRGWPCS-----DYFIKGGVKPQSVETEM 144

Query: 554 NSINATQSEDEE 519
            S  A  SEDEE
Sbjct: 145 TSNTAYHSEDEE 156


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