BLASTX nr result

ID: Coptis21_contig00003359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003359
         (1200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283553.1| PREDICTED: uncharacterized protein LOC100244...   211   3e-52
ref|XP_002526984.1| conserved hypothetical protein [Ricinus comm...   169   1e-39
ref|XP_002314857.1| predicted protein [Populus trichocarpa] gi|2...   167   6e-39
ref|XP_002312403.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-34
ref|XP_003614631.1| hypothetical protein MTR_5g056480 [Medicago ...   119   2e-24

>ref|XP_002283553.1| PREDICTED: uncharacterized protein LOC100244058 [Vitis vinifera]
          Length = 317

 Score =  211 bits (537), Expect = 3e-52
 Identities = 133/339 (39%), Positives = 190/339 (56%), Gaps = 9/339 (2%)
 Frame = -3

Query: 1150 MEIPVLSRISGFEAEINRLQNPSLISRYFHLSAIEETIKVQSFWTWGALIIALIATFTSF 971
            MEIP+++R+S F+       +PS++SR F +S I +     S W WGALI+AL+ATFTS 
Sbjct: 1    MEIPIINRMSNFD-------DPSVLSRLFPISQISQPF---SLWKWGALILALLATFTSI 50

Query: 970  ISRLKLVIFRFQRGNSVITQPLLQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRY 791
            I+R K++I R ++ +S+  QPL  +                                S  
Sbjct: 51   INRTKILIIRLRKRSSLAAQPLHSE----PDDGGFSDSEDDTCSSISSDDDDDAEPMSLI 106

Query: 790  DEDFTVAGNYEETQGQNSKFKLTRRNSCSFDNFSWSDFVNGKSVVKSWDGLGLGLNFEKA 611
            ++D  V   Y E + Q+ K KL R  S   D    S+  NGKS+VK WDGL L    + +
Sbjct: 107  EDDKNVRVGYCEDEPQSHKTKLRRCRSIG-DRLFLSELTNGKSIVKLWDGLSL----DNS 161

Query: 610  SGSLISLWDLNKNEITSSFSSGMCQIPALSMPSPAVIVSAGLETSRNVALRVFDTRVGRQ 431
             GSL+S++DLNK+   SSF  G  + P++S+ SPAV+VS     + N ALRV+DTRVGRQ
Sbjct: 162  CGSLVSIYDLNKDLNKSSFFGGTHRFPSVSVTSPAVVVSTMTGNAMNTALRVWDTRVGRQ 221

Query: 430  IPQIFTEWQPRR---------KFEKLYIHNDVSVNNRAVVVRDIRKVDLLLENLTESDVN 278
            IP IF EW+P+            EK+Y+ +DV+     + V D+R     L+N+TE D  
Sbjct: 222  IPAIFAEWRPQMGKRVSISTGGIEKVYVRDDVT---GELTVGDMRNASSPLQNVTECDGG 278

Query: 277  TWWDSDAVIVDGNQEVCYSGNGCGSVVTRCRNAVFSYLF 161
            TWWD+DAV+V  +    ++  GC S+V+RC +AV SYLF
Sbjct: 279  TWWDADAVMVYKDYVDQWAVKGCESIVSRCCDAVKSYLF 317


>ref|XP_002526984.1| conserved hypothetical protein [Ricinus communis]
            gi|223533619|gb|EEF35356.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 337

 Score =  169 bits (428), Expect = 1e-39
 Identities = 131/344 (38%), Positives = 179/344 (52%), Gaps = 28/344 (8%)
 Frame = -3

Query: 1150 MEIPVLSRISGFEAEINRLQNPSLISRYFHLSAIEETIKVQSFWTWGALIIALIATFTSF 971
            MEIPV++RI  FEA    LQNPS +S+   LS +E+  +   FW WGALI+AL+A+F++ 
Sbjct: 1    MEIPVINRIGDFEAS---LQNPSFLSQAITLSGVEKIHQAYGFWKWGALILALVASFSTI 57

Query: 970  ISRLKLVIFRFQRGNSVITQP---LLQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 800
            I+R+K +I R Q      + P     QQ                                
Sbjct: 58   INRIKNLIIRIQNHYLTPSPPPPLTTQQHYDSDTESETSSSSSSDDEQDIEVEDDEEDED 117

Query: 799  SRY-------DEDFTV---AGNYEETQGQNSKFKLTRRNSCSFDNFSWSDFVNGKSVVKS 650
             R        D+ ++V   +G+Y + Q QN   +  RRNS   D FS  +F NGKSVVK 
Sbjct: 118  ERCSWRSNDDDDYYSVVKGSGHYIDDQWQNRNLR-RRRNSSLQDLFS--EFRNGKSVVKL 174

Query: 649  WD--GLGLGLNFEKASGSLISLWDLNKNEITSSFSSGMCQIPALSMPS--PAVIVSAGLE 482
            WD  G G GLN +  S + +SL D+NK     S       IPA+S  S  PAVIVS+   
Sbjct: 175  WDNLGFGFGLNLDNNSRNCVSLHDINKELSLFSILGERSDIPAVSTSSSSPAVIVSSEAN 234

Query: 481  TSRNVALRVFDTRVGRQIPQIFTEWQPRR-KFE----------KLYIHNDVSVNNRAVVV 335
             + N+ L+V+DTRVG +IP+I  EW+PR  KF           K+Y+ +DV+     + V
Sbjct: 235  VAGNL-LKVWDTRVGCRIPEILAEWRPRLGKFVGISSGGGGVGKVYVRDDVTGR---LTV 290

Query: 334  RDIRKVDLLLENLTESDVNTWWDSDAVIVDGNQEVCYSGNGCGS 203
             D+RKV   L N TE+DV+TWWD+D V V G ++     NG GS
Sbjct: 291  GDMRKVKSPLVNATETDVDTWWDADGVSV-GEED-----NGVGS 328


>ref|XP_002314857.1| predicted protein [Populus trichocarpa] gi|222863897|gb|EEF01028.1|
            predicted protein [Populus trichocarpa]
          Length = 311

 Score =  167 bits (422), Expect = 6e-39
 Identities = 115/334 (34%), Positives = 166/334 (49%), Gaps = 28/334 (8%)
 Frame = -3

Query: 1150 MEIPVLSRISGFEAEINRLQNPSLISRYFHLSAIEETIKVQSFWTWGALIIALIATFTSF 971
            MEIPV++RIS FE  I+ LQNPS +S+   LS  E+  +  SFW WGAL++AL+A+FT+ 
Sbjct: 1    MEIPVINRISDFETGISSLQNPSFLSQILALSGAEKIHQAYSFWKWGALLLALVASFTTI 60

Query: 970  ISRLKLVIFRFQRGNSVITQPLLQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSR- 794
            I+R+K+++ RF+    + +  L+                                  SR 
Sbjct: 61   INRIKILVIRFKNHPFISSPSLITNQEDGDYESETDLSCSSSISLSDEEQEEEPPSTSRS 120

Query: 793  ------YDEDFTVAGN---YEETQGQNSKFKLTRRNSCSF-DNFSWSDFVNGKSVVKSWD 644
                  +DEDF V G+   Y + Q QN  F+L RR + S  D FS SDF N ++VVK WD
Sbjct: 121  WWSINDHDEDFCVRGSGNRYIDDQWQNGNFRLRRRRNSSIGDFFSLSDFTNERNVVKLWD 180

Query: 643  GLGLGLNFEKASG-----SLISLWDLNKNEITSSFSSGMCQIPALSMPSPAVIVSAGLET 479
             LGLGL F   +G     +++S +D+N      S     C   + +  SP          
Sbjct: 181  NLGLGLGFNLNNGGDSRSAVVSFYDINNERNICSIFGSKCD--SFTAVSP---------- 228

Query: 478  SRNVALRVFDTRVGRQIPQIFTEWQPRRK------------FEKLYIHNDVSVNNRAVVV 335
                       RVG ++P++F E +P                +K+Y+ +DV+     + V
Sbjct: 229  -----------RVGFRMPEVFAELRPMLGKIVGVSGGGGGGAKKVYVRDDVTGE---LTV 274

Query: 334  RDIRKVDLLLENLTESDVNTWWDSDAVIVDGNQE 233
             DIRKV   L N+TESDV+TWWD+DAVIV+   E
Sbjct: 275  GDIRKVSSPLVNVTESDVDTWWDADAVIVEDECE 308


>ref|XP_002312403.1| predicted protein [Populus trichocarpa] gi|222852223|gb|EEE89770.1|
            predicted protein [Populus trichocarpa]
          Length = 279

 Score =  152 bits (383), Expect = 2e-34
 Identities = 109/326 (33%), Positives = 154/326 (47%), Gaps = 20/326 (6%)
 Frame = -3

Query: 1150 MEIPVLSRISGFEAEINRLQNPSLISRYFHLSAIEETIKVQSFWTWGALIIALIATFTSF 971
            MEIPV++RIS FE  +  LQNP+ +S+   LS +E+  +  SFW WGALI+AL A+FT+ 
Sbjct: 1    MEIPVINRISDFETGLASLQNPTFLSQILALSGVEKIHQAYSFWKWGALILALAASFTAI 60

Query: 970  ISRLKLVIFRFQRGNSVITQPLLQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSR- 794
            I+R+K++I RF+    + +  L+                                  SR 
Sbjct: 61   INRIKILIIRFKNHPFISSPSLISNQEDCDYESETDLSCSSSISLSDDEQEEESTSSSRS 120

Query: 793  ------YDEDFTVAGN---YEETQGQNSKFKL-TRRNSCSFDNFSWSDFVNGKSVVKSWD 644
                  +D+DF V G+   Y + Q Q   F+L  RRNS   D FS +DF NGK+VVK WD
Sbjct: 121  WWSINDHDQDFRVRGSGNRYIDDQCQGGNFRLRRRRNSSIGDFFSLTDFTNGKNVVKLWD 180

Query: 643  GLGLGLNFEKASGSLISLWDLNKNEITSSFSSGMCQIPALSMPSPAVIVSAGLETSRNVA 464
             LGL  N   +  S +SLW                                         
Sbjct: 181  NLGLKTNL--SGHSSLSLW----------------------------------------- 197

Query: 463  LRVFDTRVGRQIPQIFTEWQPR---------RKFEKLYIHNDVSVNNRAVVVRDIRKVDL 311
                DTRVG ++P++F E +P             EK+Y+ +DV+     + V D+RK   
Sbjct: 198  ----DTRVGFRVPEVFAELRPTLGKIVGVVVGGVEKVYVRDDVT---GELTVGDMRKPSS 250

Query: 310  LLENLTESDVNTWWDSDAVIVDGNQE 233
             L N+TESDV+TWW++DAVIV+   E
Sbjct: 251  PLVNVTESDVDTWWETDAVIVENECE 276


>ref|XP_003614631.1| hypothetical protein MTR_5g056480 [Medicago truncatula]
            gi|355515966|gb|AES97589.1| hypothetical protein
            MTR_5g056480 [Medicago truncatula]
          Length = 314

 Score =  119 bits (297), Expect = 2e-24
 Identities = 102/325 (31%), Positives = 152/325 (46%), Gaps = 24/325 (7%)
 Frame = -3

Query: 1150 MEIPVLSRISGFEAEINRLQ-NPSLISRYFHLS--AIEETIKVQSFWTWGALIIALIATF 980
            M++P++ R++ F+A  N LQ NPS  S+    S   I+      +F  WGA+I+AL+ATF
Sbjct: 1    MQVPLIDRLNDFQAGFNSLQQNPSFPSQITATSFNGIQSVSIAFNFCKWGAVILALVATF 60

Query: 979  TSFISRLKLVIFRFQRGNSV---ITQPLLQQLXXXXXXXXXXXXXXXXXXXXXXXXXXXX 809
            TS I+++ + I   ++  S    IT                                   
Sbjct: 61   TSLINKVTIFIIHLRKKASSLPSITFDNDDDFSSDDEDNENDDIVSLSSSSEFEDDEPSM 120

Query: 808  XXXSRYDEDFTVAGNYEET------QGQNSKFKLTRRNSCSFDNFSWSDFVNGKSVVKSW 647
               S + + F + GN  +       Q QNS     RR     D FS  +  NG +VVK W
Sbjct: 121  SSSSSFKDFFRLTGNSNDYDVNNVFQTQNSGH---RRQHSIGDFFSLLELANGDNVVKLW 177

Query: 646  D--GLGLGLNFEKASGSLISLWDLNKNEITSSFSSGMCQIPALSMPSPAVIVSAGLETSR 473
            D  G GLGL+F++    +IS    N +   +S ++           SP VIVSAG     
Sbjct: 178  DSIGFGLGLDFDEYEDGVIS--STNPHAPLTSAAA-----------SPDVIVSAGEGAHG 224

Query: 472  NVALRVFDTRVGRQIPQIFTEWQP---------RRKFEKLYIHNDVSVNNRAVVVRDIRK 320
            N+A+ ++DTR+ R+ P +  EW P             +K+Y+ ++     + + V D+RK
Sbjct: 225  NLAVEIWDTRLRRRKPSVVAEWGPTVGNTLRVESGGVQKVYVRDN---GRQRLTVGDMRK 281

Query: 319  VDLLLENLTESDV-NTWWDSDAVIV 248
            V   L N+TESD  NTWWD+DAVIV
Sbjct: 282  VSFPLGNVTESDADNTWWDADAVIV 306


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