BLASTX nr result
ID: Coptis21_contig00003357
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003357 (291 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera] 67 2e-09 ref|XP_003577326.1| PREDICTED: probable ribosome biogenesis prot... 66 3e-09 ref|XP_003568608.1| PREDICTED: probable ribosome biogenesis prot... 66 3e-09 dbj|BAK04088.1| predicted protein [Hordeum vulgare subsp. vulgare] 66 3e-09 ref|NP_001059399.1| Os07g0292800 [Oryza sativa Japonica Group] g... 65 4e-09 >emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera] Length = 1073 Score = 66.6 bits (161), Expect = 2e-09 Identities = 28/30 (93%), Positives = 29/30 (96%) Frame = -2 Query: 98 SAMRLEKCWFCSSTVYPGHGIQFVRNDAKV 9 S MRLEKCWFCSSTVYPGHGIQFVRNDAK+ Sbjct: 55 SIMRLEKCWFCSSTVYPGHGIQFVRNDAKI 84 >ref|XP_003577326.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Brachypodium distachyon] Length = 159 Score = 65.9 bits (159), Expect = 3e-09 Identities = 28/28 (100%), Positives = 28/28 (100%) Frame = -2 Query: 92 MRLEKCWFCSSTVYPGHGIQFVRNDAKV 9 MRLEKCWFCSSTVYPGHGIQFVRNDAKV Sbjct: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKV 28 >ref|XP_003568608.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Brachypodium distachyon] Length = 159 Score = 65.9 bits (159), Expect = 3e-09 Identities = 28/28 (100%), Positives = 28/28 (100%) Frame = -2 Query: 92 MRLEKCWFCSSTVYPGHGIQFVRNDAKV 9 MRLEKCWFCSSTVYPGHGIQFVRNDAKV Sbjct: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKV 28 >dbj|BAK04088.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 162 Score = 65.9 bits (159), Expect = 3e-09 Identities = 28/28 (100%), Positives = 28/28 (100%) Frame = -2 Query: 92 MRLEKCWFCSSTVYPGHGIQFVRNDAKV 9 MRLEKCWFCSSTVYPGHGIQFVRNDAKV Sbjct: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKV 28 >ref|NP_001059399.1| Os07g0292800 [Oryza sativa Japonica Group] gi|27817966|dbj|BAC55730.1| putative 60S ribosomal protein L30 [Oryza sativa Japonica Group] gi|50509542|dbj|BAD31246.1| putative 60S ribosomal protein L30 [Oryza sativa Japonica Group] gi|113610935|dbj|BAF21313.1| Os07g0292800 [Oryza sativa Japonica Group] gi|125599884|gb|EAZ39460.1| hypothetical protein OsJ_23889 [Oryza sativa Japonica Group] gi|215707125|dbj|BAG93585.1| unnamed protein product [Oryza sativa Japonica Group] Length = 163 Score = 65.5 bits (158), Expect = 4e-09 Identities = 27/28 (96%), Positives = 28/28 (100%) Frame = -2 Query: 92 MRLEKCWFCSSTVYPGHGIQFVRNDAKV 9 MRLEKCWFCSSTVYPGHGIQFVRNDAK+ Sbjct: 1 MRLEKCWFCSSTVYPGHGIQFVRNDAKI 28