BLASTX nr result
ID: Coptis21_contig00003346
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003346 (538 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ... 179 3e-43 emb|CBI17233.3| unnamed protein product [Vitis vinifera] 179 3e-43 emb|CAN69949.1| hypothetical protein VITISV_005397 [Vitis vinifera] 179 3e-43 ref|XP_004161775.1| PREDICTED: ribosome biogenesis protein BMS1 ... 176 2e-42 ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 ... 176 2e-42 >ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis vinifera] Length = 1139 Score = 179 bits (453), Expect = 3e-43 Identities = 89/138 (64%), Positives = 105/138 (76%) Frame = +3 Query: 3 TWQGMKTVAELRREHNLPVPVNKDSLYKPIVRKERKFNPLQIPKKVQAELPFASKPKDKP 182 TWQGMKTVAELRRE+ LPVPVNKDSLY+PI RK RKFNPL IPK +QA LPFASKPKD Sbjct: 992 TWQGMKTVAELRRENKLPVPVNKDSLYRPIERKARKFNPLVIPKSLQAALPFASKPKDIL 1051 Query: 183 SRKQQPYDIRRAVIMEPHERRVHTLQQQLQMIRNEKVRKRKLKDQXXXXXXXXXXXXXXQ 362 RK+ + RRAV+MEPHER+VH L Q LQMIRNEK++KRKLK+ Q Sbjct: 1052 KRKKPLLENRRAVVMEPHERKVHALVQHLQMIRNEKMKKRKLKETEKRKRFEAEKAKEEQ 1111 Query: 363 ISKKRQREDRRVKYREED 416 +S+KRQRE+R+ +YR +D Sbjct: 1112 VSRKRQREERKERYRAQD 1129 >emb|CBI17233.3| unnamed protein product [Vitis vinifera] Length = 1305 Score = 179 bits (453), Expect = 3e-43 Identities = 89/138 (64%), Positives = 105/138 (76%) Frame = +3 Query: 3 TWQGMKTVAELRREHNLPVPVNKDSLYKPIVRKERKFNPLQIPKKVQAELPFASKPKDKP 182 TWQGMKTVAELRRE+ LPVPVNKDSLY+PI RK RKFNPL IPK +QA LPFASKPKD Sbjct: 1158 TWQGMKTVAELRRENKLPVPVNKDSLYRPIERKARKFNPLVIPKSLQAALPFASKPKDIL 1217 Query: 183 SRKQQPYDIRRAVIMEPHERRVHTLQQQLQMIRNEKVRKRKLKDQXXXXXXXXXXXXXXQ 362 RK+ + RRAV+MEPHER+VH L Q LQMIRNEK++KRKLK+ Q Sbjct: 1218 KRKKPLLENRRAVVMEPHERKVHALVQHLQMIRNEKMKKRKLKETEKRKRFEAEKAKEEQ 1277 Query: 363 ISKKRQREDRRVKYREED 416 +S+KRQRE+R+ +YR +D Sbjct: 1278 VSRKRQREERKERYRAQD 1295 >emb|CAN69949.1| hypothetical protein VITISV_005397 [Vitis vinifera] Length = 325 Score = 179 bits (453), Expect = 3e-43 Identities = 89/138 (64%), Positives = 105/138 (76%) Frame = +3 Query: 3 TWQGMKTVAELRREHNLPVPVNKDSLYKPIVRKERKFNPLQIPKKVQAELPFASKPKDKP 182 TWQGMKTVAELRRE+ LPVPVNKDSLY+PI RK RKFNPL IPK +QA LPFASKPKD Sbjct: 178 TWQGMKTVAELRRENKLPVPVNKDSLYRPIERKARKFNPLVIPKSLQAALPFASKPKDIL 237 Query: 183 SRKQQPYDIRRAVIMEPHERRVHTLQQQLQMIRNEKVRKRKLKDQXXXXXXXXXXXXXXQ 362 RK+ + RRAV+MEPHER+VH L Q LQMIRNEK++KRKLK+ Q Sbjct: 238 KRKKPLLENRRAVVMEPHERKVHALVQHLQMIRNEKMKKRKLKETEKRKRFEAEKAKEEQ 297 Query: 363 ISKKRQREDRRVKYREED 416 +S+KRQRE+R+ +YR +D Sbjct: 298 VSRKRQREERKERYRAQD 315 >ref|XP_004161775.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cucumis sativus] Length = 553 Score = 176 bits (446), Expect = 2e-42 Identities = 83/137 (60%), Positives = 108/137 (78%) Frame = +3 Query: 6 WQGMKTVAELRREHNLPVPVNKDSLYKPIVRKERKFNPLQIPKKVQAELPFASKPKDKPS 185 WQGMKTVAELR+EHNLP+P+NKDSLYKPI R++RKFNPL IPK +QA LPF SKPK+ P Sbjct: 407 WQGMKTVAELRKEHNLPIPLNKDSLYKPIERQKRKFNPLVIPKSLQAALPFKSKPKNTPG 466 Query: 186 RKQQPYDIRRAVIMEPHERRVHTLQQQLQMIRNEKVRKRKLKDQXXXXXXXXXXXXXXQI 365 +++ + RRAV+MEP +R+VH L QQLQ++R+EK++KRKLK++ Q+ Sbjct: 467 QQRPLLEKRRAVVMEPRDRKVHALVQQLQLMRHEKMKKRKLKEEKKRKELEAEHAKTEQL 526 Query: 366 SKKRQREDRRVKYREED 416 SKKRQRE+RR +YRE+D Sbjct: 527 SKKRQREERRERYREQD 543 >ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cucumis sativus] Length = 1198 Score = 176 bits (446), Expect = 2e-42 Identities = 83/137 (60%), Positives = 108/137 (78%) Frame = +3 Query: 6 WQGMKTVAELRREHNLPVPVNKDSLYKPIVRKERKFNPLQIPKKVQAELPFASKPKDKPS 185 WQGMKTVAELR+EHNLP+P+NKDSLYKPI R++RKFNPL IPK +QA LPF SKPK+ P Sbjct: 1052 WQGMKTVAELRKEHNLPIPLNKDSLYKPIERQKRKFNPLVIPKSLQAALPFKSKPKNTPG 1111 Query: 186 RKQQPYDIRRAVIMEPHERRVHTLQQQLQMIRNEKVRKRKLKDQXXXXXXXXXXXXXXQI 365 +++ + RRAV+MEP +R+VH L QQLQ++R+EK++KRKLK++ Q+ Sbjct: 1112 QQRPLLEKRRAVVMEPRDRKVHALVQQLQLMRHEKMKKRKLKEEKKRKELEAEHAKTEQL 1171 Query: 366 SKKRQREDRRVKYREED 416 SKKRQRE+RR +YRE+D Sbjct: 1172 SKKRQREERRERYREQD 1188