BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003346
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   179   3e-43
emb|CBI17233.3| unnamed protein product [Vitis vinifera]              179   3e-43
emb|CAN69949.1| hypothetical protein VITISV_005397 [Vitis vinifera]   179   3e-43
ref|XP_004161775.1| PREDICTED: ribosome biogenesis protein BMS1 ...   176   2e-42
ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 ...   176   2e-42

>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis vinifera]
          Length = 1139

 Score =  179 bits (453), Expect = 3e-43
 Identities = 89/138 (64%), Positives = 105/138 (76%)
 Frame = +3

Query: 3    TWQGMKTVAELRREHNLPVPVNKDSLYKPIVRKERKFNPLQIPKKVQAELPFASKPKDKP 182
            TWQGMKTVAELRRE+ LPVPVNKDSLY+PI RK RKFNPL IPK +QA LPFASKPKD  
Sbjct: 992  TWQGMKTVAELRRENKLPVPVNKDSLYRPIERKARKFNPLVIPKSLQAALPFASKPKDIL 1051

Query: 183  SRKQQPYDIRRAVIMEPHERRVHTLQQQLQMIRNEKVRKRKLKDQXXXXXXXXXXXXXXQ 362
             RK+   + RRAV+MEPHER+VH L Q LQMIRNEK++KRKLK+               Q
Sbjct: 1052 KRKKPLLENRRAVVMEPHERKVHALVQHLQMIRNEKMKKRKLKETEKRKRFEAEKAKEEQ 1111

Query: 363  ISKKRQREDRRVKYREED 416
            +S+KRQRE+R+ +YR +D
Sbjct: 1112 VSRKRQREERKERYRAQD 1129


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score =  179 bits (453), Expect = 3e-43
 Identities = 89/138 (64%), Positives = 105/138 (76%)
 Frame = +3

Query: 3    TWQGMKTVAELRREHNLPVPVNKDSLYKPIVRKERKFNPLQIPKKVQAELPFASKPKDKP 182
            TWQGMKTVAELRRE+ LPVPVNKDSLY+PI RK RKFNPL IPK +QA LPFASKPKD  
Sbjct: 1158 TWQGMKTVAELRRENKLPVPVNKDSLYRPIERKARKFNPLVIPKSLQAALPFASKPKDIL 1217

Query: 183  SRKQQPYDIRRAVIMEPHERRVHTLQQQLQMIRNEKVRKRKLKDQXXXXXXXXXXXXXXQ 362
             RK+   + RRAV+MEPHER+VH L Q LQMIRNEK++KRKLK+               Q
Sbjct: 1218 KRKKPLLENRRAVVMEPHERKVHALVQHLQMIRNEKMKKRKLKETEKRKRFEAEKAKEEQ 1277

Query: 363  ISKKRQREDRRVKYREED 416
            +S+KRQRE+R+ +YR +D
Sbjct: 1278 VSRKRQREERKERYRAQD 1295


>emb|CAN69949.1| hypothetical protein VITISV_005397 [Vitis vinifera]
          Length = 325

 Score =  179 bits (453), Expect = 3e-43
 Identities = 89/138 (64%), Positives = 105/138 (76%)
 Frame = +3

Query: 3   TWQGMKTVAELRREHNLPVPVNKDSLYKPIVRKERKFNPLQIPKKVQAELPFASKPKDKP 182
           TWQGMKTVAELRRE+ LPVPVNKDSLY+PI RK RKFNPL IPK +QA LPFASKPKD  
Sbjct: 178 TWQGMKTVAELRRENKLPVPVNKDSLYRPIERKARKFNPLVIPKSLQAALPFASKPKDIL 237

Query: 183 SRKQQPYDIRRAVIMEPHERRVHTLQQQLQMIRNEKVRKRKLKDQXXXXXXXXXXXXXXQ 362
            RK+   + RRAV+MEPHER+VH L Q LQMIRNEK++KRKLK+               Q
Sbjct: 238 KRKKPLLENRRAVVMEPHERKVHALVQHLQMIRNEKMKKRKLKETEKRKRFEAEKAKEEQ 297

Query: 363 ISKKRQREDRRVKYREED 416
           +S+KRQRE+R+ +YR +D
Sbjct: 298 VSRKRQREERKERYRAQD 315


>ref|XP_004161775.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cucumis
           sativus]
          Length = 553

 Score =  176 bits (446), Expect = 2e-42
 Identities = 83/137 (60%), Positives = 108/137 (78%)
 Frame = +3

Query: 6   WQGMKTVAELRREHNLPVPVNKDSLYKPIVRKERKFNPLQIPKKVQAELPFASKPKDKPS 185
           WQGMKTVAELR+EHNLP+P+NKDSLYKPI R++RKFNPL IPK +QA LPF SKPK+ P 
Sbjct: 407 WQGMKTVAELRKEHNLPIPLNKDSLYKPIERQKRKFNPLVIPKSLQAALPFKSKPKNTPG 466

Query: 186 RKQQPYDIRRAVIMEPHERRVHTLQQQLQMIRNEKVRKRKLKDQXXXXXXXXXXXXXXQI 365
           +++   + RRAV+MEP +R+VH L QQLQ++R+EK++KRKLK++              Q+
Sbjct: 467 QQRPLLEKRRAVVMEPRDRKVHALVQQLQLMRHEKMKKRKLKEEKKRKELEAEHAKTEQL 526

Query: 366 SKKRQREDRRVKYREED 416
           SKKRQRE+RR +YRE+D
Sbjct: 527 SKKRQREERRERYREQD 543


>ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cucumis sativus]
          Length = 1198

 Score =  176 bits (446), Expect = 2e-42
 Identities = 83/137 (60%), Positives = 108/137 (78%)
 Frame = +3

Query: 6    WQGMKTVAELRREHNLPVPVNKDSLYKPIVRKERKFNPLQIPKKVQAELPFASKPKDKPS 185
            WQGMKTVAELR+EHNLP+P+NKDSLYKPI R++RKFNPL IPK +QA LPF SKPK+ P 
Sbjct: 1052 WQGMKTVAELRKEHNLPIPLNKDSLYKPIERQKRKFNPLVIPKSLQAALPFKSKPKNTPG 1111

Query: 186  RKQQPYDIRRAVIMEPHERRVHTLQQQLQMIRNEKVRKRKLKDQXXXXXXXXXXXXXXQI 365
            +++   + RRAV+MEP +R+VH L QQLQ++R+EK++KRKLK++              Q+
Sbjct: 1112 QQRPLLEKRRAVVMEPRDRKVHALVQQLQLMRHEKMKKRKLKEEKKRKELEAEHAKTEQL 1171

Query: 366  SKKRQREDRRVKYREED 416
            SKKRQRE+RR +YRE+D
Sbjct: 1172 SKKRQREERRERYREQD 1188