BLASTX nr result
ID: Coptis21_contig00003333
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00003333
(1494 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI18893.3| unnamed protein product [Vitis vinifera] 416 e-114
ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synth... 414 e-113
ref|XP_002510624.1| conserved hypothetical protein [Ricinus comm... 393 e-107
ref|XP_002307763.1| predicted protein [Populus trichocarpa] gi|2... 369 2e-99
ref|XP_002893108.1| hypothetical protein ARALYDRAFT_889490 [Arab... 353 5e-95
>emb|CBI18893.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 416 bits (1070), Expect = e-114
Identities = 229/440 (52%), Positives = 292/440 (66%), Gaps = 12/440 (2%)
Frame = -1
Query: 1287 DEEAQIIEHAVRSLPSHAAIDLLSSGVCARCILRLFGVSGRVXXXXXXXXXXXXSVLEKS 1108
+++ +I+ AV + HA DLLS G+C CI RL GV G + V++
Sbjct: 64 EDDMRILNDAVSKVSPHAVKDLLSLGICIGCIFRLSGVRGHIFSCPSLLLSILHPVIDSG 123
Query: 1107 NSDTWRPSLQAESPYYCSVCLGILQFCHSDGKEMLLTKKDEVSEFTVSIAEMVKKEGHEI 928
+ + + S + E P CS+CLG+LQF + D K+ML+ KKD E VSIA +VKKEGHE
Sbjct: 124 AAHSSQES-ECE-PVICSICLGVLQFTYFDDKKMLV-KKDSADELAVSIANLVKKEGHEF 180
Query: 927 ESFCFEISVPPIISANENAIRLCMKNKYGSELWCQEEKLLAEHVSLKDALKMSVTDSLET 748
++F E+S+PP+I+ NE+ + L MK KYGSELW QE K L+E +S KDALK+S+ + LE
Sbjct: 181 DNFSLEVSIPPVIAENEHVVLLYMKKKYGSELWFQE-KFLSERISAKDALKLSLCNPLEK 239
Query: 747 LLAGKYALGS-FHICLTYTQTKASSWLLGCQDRNQDFKRRKTETVDS--------VQGLE 595
LL K + S F I LTY Q +AS +R+Q KRR+T T + V G+E
Sbjct: 240 LLDVKSSGSSTFRIRLTYAQPRASGKNQNITERSQGCKRRRTGTENIFSTVHGSVVDGIE 299
Query: 594 CSEDASGEVGSAMDTSLNGLQDSES---FNSAPEKVKEPCCLTCHCYRTPIYVGGRYLKY 424
CS+ ++ E + + +GLQD+E+ F EKV +PC L CYRT IY+GGRYLKY
Sbjct: 300 CSDISTSEADAGIRKPSDGLQDNENSDCFKFPLEKVNQPCHLAFLCYRTHIYIGGRYLKY 359
Query: 423 SRNVSQTRWIIDDERMGEASVEEIIGNTIIPICRGDKYKFHAAGREDIDVRMLGSGRPFL 244
SRNVSQTRWIIDDERMGEASVEEIIG I+P+C GD YKFHAAGREDI+VRMLGSGRPFL
Sbjct: 360 SRNVSQTRWIIDDERMGEASVEEIIGGNILPMCLGDNYKFHAAGREDINVRMLGSGRPFL 419
Query: 243 VEVQNARHDPSKVEMTDIEEKINNSEXXXXXXXXXXXVGNQGWTLMREGEAEKQKQYAAL 64
VE+QN+RH PS+ + +IE KINN E V + GW+LM+EGE EKQKQYAAL
Sbjct: 420 VEIQNSRHVPSEALIKEIEVKINNLENKLVRVKNLKLVDSHGWSLMQEGEEEKQKQYAAL 479
Query: 63 VWISRSLGDEDLNTLSSLKD 4
VWI R L DED+ +SSLKD
Sbjct: 480 VWIDRPLKDEDMQAISSLKD 499
>ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Vitis
vinifera]
Length = 578
Score = 414 bits (1063), Expect = e-113
Identities = 233/456 (51%), Positives = 295/456 (64%), Gaps = 28/456 (6%)
Frame = -1
Query: 1287 DEEAQIIEHAVRSLPSHAAIDLLSSGVCARCILRLFGVSGRVXXXXXXXXXXXXSVL-EK 1111
+++ +I+ AV + HA DLLS G+C CI RL GV G + V+ E
Sbjct: 33 EDDMRILNDAVSKVSPHAVKDLLSLGICIGCIFRLSGVRGHIFSCPSLLLSILHPVIGEP 92
Query: 1110 SNSDTWR--------------PSLQAE-SPYYCSVCLGILQFCHSDGKEMLLTKKDEVSE 976
++S T R S ++E P CS+CLG+LQF + D K+ML+ KKD E
Sbjct: 93 TDSSTHRYTGIGGNEDSGAAHSSQESECEPVICSICLGVLQFTYFDDKKMLV-KKDSADE 151
Query: 975 FTVSIAEMVKKEGHEIESFCFEISVPPIISANENAIRLCMKNKYGSELWCQEEKLLAEHV 796
VSIA +VKKEGHE ++F E+S+PP+I+ NE+ + L MK KYGSELW QE K L+E +
Sbjct: 152 LAVSIANLVKKEGHEFDNFSLEVSIPPVIAENEHVVLLYMKKKYGSELWFQE-KFLSERI 210
Query: 795 SLKDALKMSVTDSLETLLAGKYALGS-FHICLTYTQTKASSWLLGCQDRNQDFKRRKTET 619
S KDALK+S+ + LE LL K + S F I LTY Q +AS +R+Q KRR+T T
Sbjct: 211 SAKDALKLSLCNPLEKLLDVKSSGSSTFRIRLTYAQPRASGKNQNITERSQGCKRRRTGT 270
Query: 618 VDS--------VQGLECSEDASGEVGSAMDTSLNGLQDSES---FNSAPEKVKEPCCLTC 472
+ V G+ECS+ ++ E + + +GLQD+E+ F EKV +PC L
Sbjct: 271 ENIFSTVHGSVVDGIECSDISTSEADAGIRKPSDGLQDNENSDCFKFPLEKVNQPCHLAF 330
Query: 471 HCYRTPIYVGGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGNTIIPICRGDKYKFHAAG 292
CYRT IY+GGRYLKYSRNVSQTRWIIDDERMGEASVEEIIG I+P+C GD YKFHAAG
Sbjct: 331 LCYRTHIYIGGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGGNILPMCLGDNYKFHAAG 390
Query: 291 REDIDVRMLGSGRPFLVEVQNARHDPSKVEMTDIEEKINNSEXXXXXXXXXXXVGNQGWT 112
REDI+VRMLGSGRPFLVE+QN+RH PS+ + +IE KINN E V + GW+
Sbjct: 391 REDINVRMLGSGRPFLVEIQNSRHVPSEALIKEIEVKINNLENKLVRVKNLKLVDSHGWS 450
Query: 111 LMREGEAEKQKQYAALVWISRSLGDEDLNTLSSLKD 4
LM+EGE EKQKQYAALVWI R L DED+ +SSLKD
Sbjct: 451 LMQEGEEEKQKQYAALVWIDRPLKDEDMQAISSLKD 486
>ref|XP_002510624.1| conserved hypothetical protein [Ricinus communis]
gi|223551325|gb|EEF52811.1| conserved hypothetical
protein [Ricinus communis]
Length = 565
Score = 393 bits (1010), Expect = e-107
Identities = 222/448 (49%), Positives = 280/448 (62%), Gaps = 19/448 (4%)
Frame = -1
Query: 1287 DEEAQIIEHAVRSLPSHAAIDLLSSGVCARCILRLFGVSGRVXXXXXXXXXXXXSVLEKS 1108
DE+ ++ AVRSLPSHA LL +G+C RCI RL GV G + ++L +S
Sbjct: 32 DEDMRLFNEAVRSLPSHAVKGLLRNGICMRCIFRLLGVQGHIFFTYPLSRSLMHNILGES 91
Query: 1107 NSDTWRPSLQAESPY--------YCSVCLGILQFCHSDGKEMLLTKKDEVSEFTVSIAEM 952
D ++ S Y C+VCLGILQF H D K +L+ K + V+ VSIAE+
Sbjct: 92 WKDD--EDMKGCSTYNESGVDQEICNVCLGILQFIHRDDKGVLVKKHNAVN-LCVSIAEL 148
Query: 951 VKKEGHEIESFCFEISVPPIISANENAIRLCMKNKYGSELWCQEEKLLAEHVSLKDALKM 772
+K+EGH+I+SF E+S+ PII NE IRL M+ KY SELW QE +++ + K+ALK
Sbjct: 149 IKQEGHQIDSFSLEVSIAPIIQENERVIRLYMERKYRSELWFQES--VSKCICTKEALKF 206
Query: 771 SVTDSLETLLAGKYALGSFHICLTYTQTKASSWLLGCQDRNQDFKRRKTETVDSVQGLE- 595
++ + LE +L K S I LTYTQ K S + KRRKT D+ + +
Sbjct: 207 AIANPLERMLDVKSGPSSCRIRLTYTQAKPSGIAPNSVPGGEGCKRRKTGITDAPESVNN 266
Query: 594 --------CSEDASGEVGSAMDTSLNGLQDSESFNSA--PEKVKEPCCLTCHCYRTPIYV 445
C + + + + ++S GL++ ES EKVKEPC L CYRTPIY
Sbjct: 267 ELINARNGCFDSSMYKGIDSSESSFCGLENHESSECIFPKEKVKEPCNLLFLCYRTPIYF 326
Query: 444 GGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGNTIIPICRGDKYKFHAAGREDIDVRML 265
GGRYLK+SRNVSQTRWIIDDERMGEAS+EEIIG +I P+C+GD YKFHAAGREDIDVRML
Sbjct: 327 GGRYLKFSRNVSQTRWIIDDERMGEASIEEIIGGSIFPMCQGDSYKFHAAGREDIDVRML 386
Query: 264 GSGRPFLVEVQNARHDPSKVEMTDIEEKINNSEXXXXXXXXXXXVGNQGWTLMREGEAEK 85
GSGRPFLVE+QN R PS+ + +IE KINN V N WTLM EGEAEK
Sbjct: 387 GSGRPFLVEIQNPRQLPSETLVEEIETKINNMHDKLVGVRHLKMVSNHSWTLMHEGEAEK 446
Query: 84 QKQYAALVWISRSLGDEDLNTLSSLKDM 1
QKQY ALVWISR L D+DL +++SLKDM
Sbjct: 447 QKQYCALVWISRPLEDQDLQSIASLKDM 474
>ref|XP_002307763.1| predicted protein [Populus trichocarpa] gi|222857212|gb|EEE94759.1|
predicted protein [Populus trichocarpa]
Length = 520
Score = 369 bits (946), Expect = 2e-99
Identities = 217/434 (50%), Positives = 267/434 (61%), Gaps = 5/434 (1%)
Frame = -1
Query: 1287 DEEAQIIEHAVRSLPSHAAIDLLSSGVCARCILRLFGVSGRVXXXXXXXXXXXXSVLEKS 1108
D+E + + AVRSLPSHA DLLS+G + S
Sbjct: 32 DDERRHLNDAVRSLPSHAVKDLLSAGG------------------------------DSS 61
Query: 1107 NSDTWRPSLQAESPYYCSVCLGILQFCHSDGKEMLLTKKDEVSEFTVSIAEMVKKEGHEI 928
+S++ L+ P C +CLGILQF + D KEML+ +K+ E SIAE+ ++EGH+I
Sbjct: 62 SSESMESELK---PEVCRICLGILQFIYRDEKEMLVKRKNG-DELAASIAELTRQEGHQI 117
Query: 927 ESFCFEISVPPIISANENAIRLCMKNKYGSELWCQEEKLLAEHVSLKDALKMSVTDSLET 748
+ F E+S+PPII NE A+RL MK KYGSELW QE L+E +S KDALK ++ + LE
Sbjct: 118 DGFSLEVSIPPIIFENEQAVRLYMKKKYGSELWFQER--LSECISTKDALKFAIVNPLEI 175
Query: 747 LLAGKYALGSFHICLTYTQTKASSWLLGCQDRNQDFKRR-KTETVDSV-QGLECSEDASG 574
+L K I LTYT+TK S DRN T V+ V G C + + G
Sbjct: 176 ILDVKSGPSYVRIRLTYTETKPSIIPSKSVDRNGGTNNGLDTVHVELVGNGTGCCDLSLG 235
Query: 573 EVGSAMDTSLNGL---QDSESFNSAPEKVKEPCCLTCHCYRTPIYVGGRYLKYSRNVSQT 403
+ A S GL + SE N E+V EPC L CYRTPIY GGRYLK+SRNVSQT
Sbjct: 236 QGSPASGRSSTGLAEHESSECSNFPLERVNEPCHLVFLCYRTPIYFGGRYLKFSRNVSQT 295
Query: 402 RWIIDDERMGEASVEEIIGNTIIPICRGDKYKFHAAGREDIDVRMLGSGRPFLVEVQNAR 223
RWIIDDERMGEAS+EEIIG I+P+C+GD YKFHAAGREDIDVRMLGSGRPFLVEVQNAR
Sbjct: 296 RWIIDDERMGEASIEEIIGGNILPMCQGDSYKFHAAGREDIDVRMLGSGRPFLVEVQNAR 355
Query: 222 HDPSKVEMTDIEEKINNSEXXXXXXXXXXXVGNQGWTLMREGEAEKQKQYAALVWISRSL 43
PS+ + +IE ++NN V + W LMREGEAEKQKQY+ALVWISR L
Sbjct: 356 EVPSEALVKEIETRMNNLGNKLVGVKNLSLVTSHSWDLMREGEAEKQKQYSALVWISRPL 415
Query: 42 GDEDLNTLSSLKDM 1
DEDL ++S KD+
Sbjct: 416 EDEDLQCIASHKDL 429
>ref|XP_002893108.1| hypothetical protein ARALYDRAFT_889490 [Arabidopsis lyrata subsp.
lyrata] gi|297338950|gb|EFH69367.1| hypothetical protein
ARALYDRAFT_889490 [Arabidopsis lyrata subsp. lyrata]
Length = 504
Score = 353 bits (907), Expect = 5e-95
Identities = 203/429 (47%), Positives = 255/429 (59%)
Frame = -1
Query: 1287 DEEAQIIEHAVRSLPSHAAIDLLSSGVCARCILRLFGVSGRVXXXXXXXXXXXXSVLEKS 1108
D + + + RSL S A DLLS GVC RCI RL V S L+
Sbjct: 24 DSKTRRVYETARSLHSGAVKDLLSLGVCERCIFRLVAVEAFDSDISSVSTSTLHSWLKSG 83
Query: 1107 NSDTWRPSLQAESPYYCSVCLGILQFCHSDGKEMLLTKKDEVSEFTVSIAEMVKKEGHEI 928
+ +T S ++ C VCLGILQF SD K+ L+ K D S++ I ++VK++ HE
Sbjct: 84 DGETG--SSESSCSRICIVCLGILQFVFSDAKKELV-KSDSSSDYVSRITDLVKQDRHEF 140
Query: 927 ESFCFEISVPPIISANENAIRLCMKNKYGSELWCQEEKLLAEHVSLKDALKMSVTDSLET 748
+SF E+SVP I NE A+ +K KY +E+W Q +K S+KDALK+ + D L+
Sbjct: 141 DSFGLEVSVPSTIMENERALLSYLKGKYSTEVWLQRDKF-----SVKDALKVLLLDQLKA 195
Query: 747 LLAGKYALGSFHICLTYTQTKASSWLLGCQDRNQDFKRRKTETVDSVQGLECSEDASGEV 568
L + SFHI LTYT KAS G + + KRRKT D+ G C + S E
Sbjct: 196 SLGAESDSSSFHIRLTYT--KASDEAQGASETTHESKRRKT---DAENGSNCISENSFE- 249
Query: 567 GSAMDTSLNGLQDSESFNSAPEKVKEPCCLTCHCYRTPIYVGGRYLKYSRNVSQTRWIID 388
KV EPC + HC R PI+ GRY KYSRNVSQ+RWIID
Sbjct: 250 ----------------------KVYEPCIFSVHCNRMPIFFSGRYFKYSRNVSQSRWIID 287
Query: 387 DERMGEASVEEIIGNTIIPICRGDKYKFHAAGREDIDVRMLGSGRPFLVEVQNARHDPSK 208
DERMGEASVEEI+G I+P C GD YKFHAAGREDIDVRMLGSGRPFL+EVQN+R PS+
Sbjct: 288 DERMGEASVEEILGGNILPACLGDSYKFHAAGREDIDVRMLGSGRPFLIEVQNSRQCPSE 347
Query: 207 VEMTDIEEKINNSEXXXXXXXXXXXVGNQGWTLMREGEAEKQKQYAALVWISRSLGDEDL 28
+ ++EEKINNSE +G+Q W +MREGEAEKQKQY ALVWISR L ++D
Sbjct: 348 QSLKEVEEKINNSEKKLVGVKDLKCIGSQCWAMMREGEAEKQKQYVALVWISRPLEEKDF 407
Query: 27 NTLSSLKDM 1
N++SSLK++
Sbjct: 408 NSVSSLKEL 416