BLASTX nr result
ID: Coptis21_contig00003330
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00003330 (325 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002303058.1| predicted protein [Populus trichocarpa] gi|2... 129 2e-28 ref|XP_004149781.1| PREDICTED: uncharacterized protein LOC101211... 126 2e-27 ref|XP_002265905.2| PREDICTED: uncharacterized protein LOC100245... 125 3e-27 ref|XP_002532737.1| protein translocase, putative [Ricinus commu... 123 2e-26 ref|NP_001236000.1| uncharacterized protein LOC100526920 [Glycin... 118 4e-25 >ref|XP_002303058.1| predicted protein [Populus trichocarpa] gi|222844784|gb|EEE82331.1| predicted protein [Populus trichocarpa] Length = 201 Score = 129 bits (324), Expect = 2e-28 Identities = 60/87 (68%), Positives = 70/87 (80%) Frame = -2 Query: 261 SWKERVFVPTLLAXXXXXXXGLISKHRKTHGVAHMSATYATNLSIVTGCYCGAREFIRAT 82 +WKER+ +PTLLA GL+SKHRK HG+A++S TYATN SIVTGCYCGAREF+R Sbjct: 27 NWKERILIPTLLAGITGGGVGLVSKHRKVHGLANISTTYATNFSIVTGCYCGAREFVRVV 86 Query: 81 RASGPDDLLNSAIGGFASGALLGRLQG 1 R S PDDL+NSA+ GF SGALLGRLQG Sbjct: 87 RKSEPDDLVNSAVAGFGSGALLGRLQG 113 >ref|XP_004149781.1| PREDICTED: uncharacterized protein LOC101211202 [Cucumis sativus] gi|449529275|ref|XP_004171626.1| PREDICTED: uncharacterized protein LOC101232073 [Cucumis sativus] Length = 197 Score = 126 bits (317), Expect = 2e-27 Identities = 62/93 (66%), Positives = 72/93 (77%) Frame = -2 Query: 279 TSLKRWSWKERVFVPTLLAXXXXXXXGLISKHRKTHGVAHMSATYATNLSIVTGCYCGAR 100 TS WKER+F PTLLA GL+SK+RK HG+A++SATYATNLSIV CYCGAR Sbjct: 20 TSSDYGGWKERIFYPTLLAGIVGGGAGLLSKYRKVHGLANISATYATNLSIVAACYCGAR 79 Query: 99 EFIRATRASGPDDLLNSAIGGFASGALLGRLQG 1 EF+R +R S PDDL+NSAI GF +GALLGRLQG Sbjct: 80 EFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQG 112 >ref|XP_002265905.2| PREDICTED: uncharacterized protein LOC100245423 [Vitis vinifera] gi|296085621|emb|CBI29410.3| unnamed protein product [Vitis vinifera] Length = 193 Score = 125 bits (315), Expect = 3e-27 Identities = 59/94 (62%), Positives = 73/94 (77%) Frame = -2 Query: 282 DTSLKRWSWKERVFVPTLLAXXXXXXXGLISKHRKTHGVAHMSATYATNLSIVTGCYCGA 103 D+S WKER F+PTLLA GL+SK+RK HG+A++SATYA N +IVTGCYCGA Sbjct: 15 DSSSSSEFWKERFFIPTLLAGIVGGGTGLVSKYRKVHGLANISATYAANFAIVTGCYCGA 74 Query: 102 REFIRATRASGPDDLLNSAIGGFASGALLGRLQG 1 REF+R R +GPDDL++SA+GGF SGA+LG LQG Sbjct: 75 REFVRRNRGTGPDDLISSAVGGFGSGAILGCLQG 108 >ref|XP_002532737.1| protein translocase, putative [Ricinus communis] gi|223527514|gb|EEF29639.1| protein translocase, putative [Ricinus communis] Length = 203 Score = 123 bits (308), Expect = 2e-26 Identities = 56/87 (64%), Positives = 69/87 (79%) Frame = -2 Query: 261 SWKERVFVPTLLAXXXXXXXGLISKHRKTHGVAHMSATYATNLSIVTGCYCGAREFIRAT 82 +WKER+ +PT+LA GL+SKHR+THG+A +S YATN +IVTGCYCGAREF+R + Sbjct: 26 NWKERILIPTILAGIGGGGVGLVSKHRQTHGLASISTAYATNFAIVTGCYCGAREFVRVS 85 Query: 81 RASGPDDLLNSAIGGFASGALLGRLQG 1 R S PDDL+NSA GF +GALLGRLQG Sbjct: 86 RKSEPDDLVNSAFAGFGTGALLGRLQG 112 >ref|NP_001236000.1| uncharacterized protein LOC100526920 [Glycine max] gi|255631151|gb|ACU15941.1| unknown [Glycine max] Length = 203 Score = 118 bits (296), Expect = 4e-25 Identities = 55/87 (63%), Positives = 68/87 (78%) Frame = -2 Query: 261 SWKERVFVPTLLAXXXXXXXGLISKHRKTHGVAHMSATYATNLSIVTGCYCGAREFIRAT 82 +WK R+ +PTLLA GLISKHR+T G+A + + YA N +IVTGCYCGAREF+ AT Sbjct: 25 AWKSRIVIPTLLAGVAGAGAGLISKHRRTLGLATVCSNYAVNFTIVTGCYCGAREFVAAT 84 Query: 81 RASGPDDLLNSAIGGFASGALLGRLQG 1 R +GPDD+LNSA+ GF +GALLGRLQG Sbjct: 85 RKTGPDDILNSAVAGFGTGALLGRLQG 111