BLASTX nr result

ID: Coptis21_contig00003330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003330
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303058.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
ref|XP_004149781.1| PREDICTED: uncharacterized protein LOC101211...   126   2e-27
ref|XP_002265905.2| PREDICTED: uncharacterized protein LOC100245...   125   3e-27
ref|XP_002532737.1| protein translocase, putative [Ricinus commu...   123   2e-26
ref|NP_001236000.1| uncharacterized protein LOC100526920 [Glycin...   118   4e-25

>ref|XP_002303058.1| predicted protein [Populus trichocarpa] gi|222844784|gb|EEE82331.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  129 bits (324), Expect = 2e-28
 Identities = 60/87 (68%), Positives = 70/87 (80%)
 Frame = -2

Query: 261 SWKERVFVPTLLAXXXXXXXGLISKHRKTHGVAHMSATYATNLSIVTGCYCGAREFIRAT 82
           +WKER+ +PTLLA       GL+SKHRK HG+A++S TYATN SIVTGCYCGAREF+R  
Sbjct: 27  NWKERILIPTLLAGITGGGVGLVSKHRKVHGLANISTTYATNFSIVTGCYCGAREFVRVV 86

Query: 81  RASGPDDLLNSAIGGFASGALLGRLQG 1
           R S PDDL+NSA+ GF SGALLGRLQG
Sbjct: 87  RKSEPDDLVNSAVAGFGSGALLGRLQG 113


>ref|XP_004149781.1| PREDICTED: uncharacterized protein LOC101211202 [Cucumis sativus]
           gi|449529275|ref|XP_004171626.1| PREDICTED:
           uncharacterized protein LOC101232073 [Cucumis sativus]
          Length = 197

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/93 (66%), Positives = 72/93 (77%)
 Frame = -2

Query: 279 TSLKRWSWKERVFVPTLLAXXXXXXXGLISKHRKTHGVAHMSATYATNLSIVTGCYCGAR 100
           TS     WKER+F PTLLA       GL+SK+RK HG+A++SATYATNLSIV  CYCGAR
Sbjct: 20  TSSDYGGWKERIFYPTLLAGIVGGGAGLLSKYRKVHGLANISATYATNLSIVAACYCGAR 79

Query: 99  EFIRATRASGPDDLLNSAIGGFASGALLGRLQG 1
           EF+R +R S PDDL+NSAI GF +GALLGRLQG
Sbjct: 80  EFVRVSRRSEPDDLMNSAIAGFGTGALLGRLQG 112


>ref|XP_002265905.2| PREDICTED: uncharacterized protein LOC100245423 [Vitis vinifera]
           gi|296085621|emb|CBI29410.3| unnamed protein product
           [Vitis vinifera]
          Length = 193

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/94 (62%), Positives = 73/94 (77%)
 Frame = -2

Query: 282 DTSLKRWSWKERVFVPTLLAXXXXXXXGLISKHRKTHGVAHMSATYATNLSIVTGCYCGA 103
           D+S     WKER F+PTLLA       GL+SK+RK HG+A++SATYA N +IVTGCYCGA
Sbjct: 15  DSSSSSEFWKERFFIPTLLAGIVGGGTGLVSKYRKVHGLANISATYAANFAIVTGCYCGA 74

Query: 102 REFIRATRASGPDDLLNSAIGGFASGALLGRLQG 1
           REF+R  R +GPDDL++SA+GGF SGA+LG LQG
Sbjct: 75  REFVRRNRGTGPDDLISSAVGGFGSGAILGCLQG 108


>ref|XP_002532737.1| protein translocase, putative [Ricinus communis]
           gi|223527514|gb|EEF29639.1| protein translocase,
           putative [Ricinus communis]
          Length = 203

 Score =  123 bits (308), Expect = 2e-26
 Identities = 56/87 (64%), Positives = 69/87 (79%)
 Frame = -2

Query: 261 SWKERVFVPTLLAXXXXXXXGLISKHRKTHGVAHMSATYATNLSIVTGCYCGAREFIRAT 82
           +WKER+ +PT+LA       GL+SKHR+THG+A +S  YATN +IVTGCYCGAREF+R +
Sbjct: 26  NWKERILIPTILAGIGGGGVGLVSKHRQTHGLASISTAYATNFAIVTGCYCGAREFVRVS 85

Query: 81  RASGPDDLLNSAIGGFASGALLGRLQG 1
           R S PDDL+NSA  GF +GALLGRLQG
Sbjct: 86  RKSEPDDLVNSAFAGFGTGALLGRLQG 112


>ref|NP_001236000.1| uncharacterized protein LOC100526920 [Glycine max]
           gi|255631151|gb|ACU15941.1| unknown [Glycine max]
          Length = 203

 Score =  118 bits (296), Expect = 4e-25
 Identities = 55/87 (63%), Positives = 68/87 (78%)
 Frame = -2

Query: 261 SWKERVFVPTLLAXXXXXXXGLISKHRKTHGVAHMSATYATNLSIVTGCYCGAREFIRAT 82
           +WK R+ +PTLLA       GLISKHR+T G+A + + YA N +IVTGCYCGAREF+ AT
Sbjct: 25  AWKSRIVIPTLLAGVAGAGAGLISKHRRTLGLATVCSNYAVNFTIVTGCYCGAREFVAAT 84

Query: 81  RASGPDDLLNSAIGGFASGALLGRLQG 1
           R +GPDD+LNSA+ GF +GALLGRLQG
Sbjct: 85  RKTGPDDILNSAVAGFGTGALLGRLQG 111


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