BLASTX nr result

ID: Coptis21_contig00003322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003322
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529414.1| PREDICTED: SEC12-like protein 2-like [Glycin...    60   1e-07
gb|AFK42863.1| unknown [Lotus japonicus]                               60   2e-07
ref|XP_002312443.1| predicted protein [Populus trichocarpa] gi|2...    54   1e-05

>ref|XP_003529414.1| PREDICTED: SEC12-like protein 2-like [Glycine max]
          Length = 400

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/40 (75%), Positives = 33/40 (82%)
 Frame = -3

Query: 284 KKAHLGLVTVLMFSDDSRHVASASLDSSARVTLIESKKNN 165
           KKAHLG+VT L FS DSR VAS S+DSSARVT+IE KK N
Sbjct: 335 KKAHLGIVTALAFSPDSRAVASVSMDSSARVTIIEEKKTN 374


>gb|AFK42863.1| unknown [Lotus japonicus]
          Length = 209

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/42 (69%), Positives = 34/42 (80%)
 Frame = -3

Query: 284 KKAHLGLVTVLMFSDDSRHVASASLDSSARVTLIESKKNNNG 159
           KKAHLG+VT L FS DSR +AS S+DSSARVT+IE KK + G
Sbjct: 142 KKAHLGIVTALAFSPDSRALASVSMDSSARVTIIEGKKTSGG 183


>ref|XP_002312443.1| predicted protein [Populus trichocarpa] gi|222852263|gb|EEE89810.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 26/37 (70%), Positives = 31/37 (83%)
 Frame = -3

Query: 284 KKAHLGLVTVLMFSDDSRHVASASLDSSARVTLIESK 174
           +KAHLG+VT L FS DSR + SAS+DSSARVTL+E K
Sbjct: 320 RKAHLGIVTALTFSHDSRALVSASMDSSARVTLVEDK 356


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