BLASTX nr result

ID: Coptis21_contig00003315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003315
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274005.1| PREDICTED: uncharacterized protein LOC100264...   173   2e-41
ref|XP_004152139.1| PREDICTED: uncharacterized protein LOC101220...   157   2e-36
ref|XP_002880053.1| hypothetical protein ARALYDRAFT_483465 [Arab...   154   1e-35
ref|NP_566001.1| uncharacterized protein [Arabidopsis thaliana] ...   148   7e-34
ref|XP_002310418.1| predicted protein [Populus trichocarpa] gi|2...   145   8e-33

>ref|XP_002274005.1| PREDICTED: uncharacterized protein LOC100264616 [Vitis vinifera]
           gi|147788706|emb|CAN65294.1| hypothetical protein
           VITISV_017781 [Vitis vinifera]
          Length = 167

 Score =  173 bits (439), Expect = 2e-41
 Identities = 82/161 (50%), Positives = 113/161 (70%)
 Frame = -3

Query: 641 KRVSKSLQDSPQFTTTCNSVYENCLNLTQHAFPGIRPYQLVHAXXXXXXXXXXXXXLIKK 462
           KRV  SLQ+SP+F + C+SVY  CL+L++HAF G+RPYQL  A             LIK+
Sbjct: 7   KRVKSSLQNSPKFDSVCDSVYSECLDLSEHAFAGVRPYQLSGASLRLHQSLCDHHPLIKR 66

Query: 461 WVPSPPTQNQVDTALSTITKNSPDQNSETLNQTIFKEFAVEVFKDVIVYNAGKAVVERVP 282
           WVPSPPTQ QVD AL  +T++      +TL +  FK F VE+F D +V  AG+A++ RVP
Sbjct: 67  WVPSPPTQLQVDRALRVVTRSGDSVQDQTLGRVEFKAFEVELFADAVVAGAGQALLRRVP 126

Query: 281 FGIVGIAGIGILTKSGKEVVGSVMGVYALGVATAIYVSLAG 159
            G+ GIAG+G++ +SGKE+V + +GVYALGVAT++Y+ L+G
Sbjct: 127 IGVAGIAGVGLVARSGKELVATAIGVYALGVATSVYLGLSG 167


>ref|XP_004152139.1| PREDICTED: uncharacterized protein LOC101220555 [Cucumis sativus]
           gi|449484752|ref|XP_004156970.1| PREDICTED:
           uncharacterized protein LOC101227331 [Cucumis sativus]
          Length = 169

 Score =  157 bits (396), Expect = 2e-36
 Identities = 78/163 (47%), Positives = 108/163 (66%), Gaps = 2/163 (1%)
 Frame = -3

Query: 641 KRVSKSLQDSPQFTTTCNSVYENCLNLTQHAFPGIRPYQLVHAXXXXXXXXXXXXXL--I 468
           KRV  SL +S +F + CNS + +CL LTQHA+ G+ PYQL  A                I
Sbjct: 7   KRVRNSLTNSHEFDSACNSTFSHCLALTQHAYNGVFPYQLCTAADHLHHLLTVVQPHPLI 66

Query: 467 KKWVPSPPTQNQVDTALSTITKNSPDQNSETLNQTIFKEFAVEVFKDVIVYNAGKAVVER 288
             W+PSPPT+ QVD+AL  + ++  D+  E L   +F  +A+E+F + +V N GK V+ R
Sbjct: 67  TNWLPSPPTRLQVDSALRAVNRDDSDREDEALGLILFNRWAIELFAEAVVKNVGKKVMVR 126

Query: 287 VPFGIVGIAGIGILTKSGKEVVGSVMGVYALGVATAIYVSLAG 159
           VP GI GIAGIG +T+SGK+VVG+V+ VYALGVAT++Y+SL+G
Sbjct: 127 VPVGIAGIAGIGAVTRSGKDVVGTVVAVYALGVATSVYLSLSG 169


>ref|XP_002880053.1| hypothetical protein ARALYDRAFT_483465 [Arabidopsis lyrata subsp.
           lyrata] gi|297325892|gb|EFH56312.1| hypothetical protein
           ARALYDRAFT_483465 [Arabidopsis lyrata subsp. lyrata]
          Length = 169

 Score =  154 bits (390), Expect = 1e-35
 Identities = 77/162 (47%), Positives = 112/162 (69%), Gaps = 2/162 (1%)
 Frame = -3

Query: 641 KRVSKSLQDSPQFTTTCNSVYENCLNLTQHAFPGIRPYQLVHAXXXXXXXXXXXXXL-IK 465
           KRV+  L +SP+F + C+S YE  L+L QHAF G+RPYQLV A               I 
Sbjct: 7   KRVTTILSNSPEFNSACDSAYEESLSLAQHAFAGVRPYQLVSAAAHIHRNLSSLGFSLIT 66

Query: 464 KWVPSPPTQNQVDTALS-TITKNSPDQNSETLNQTIFKEFAVEVFKDVIVYNAGKAVVER 288
           +WVPSPP+Q+QVD+AL  T+++ +  +  E L    FKE+AVEVF + +V NA K +  +
Sbjct: 67  RWVPSPPSQSQVDSALRVTVSRVAAAEEEEILGPEEFKEWAVEVFAEAVVGNARKTIASQ 126

Query: 287 VPFGIVGIAGIGILTKSGKEVVGSVMGVYALGVATAIYVSLA 162
           +P GIVGIAGIG +T+SG+ ++G+ +GVYA+GVAT++++SL+
Sbjct: 127 IPLGIVGIAGIGAVTRSGQNLIGAAIGVYAIGVATSVFLSLS 168


>ref|NP_566001.1| uncharacterized protein [Arabidopsis thaliana]
           gi|2288994|gb|AAB64323.1| expressed protein [Arabidopsis
           thaliana] gi|21555198|gb|AAM63802.1| unknown
           [Arabidopsis thaliana] gi|194708808|gb|ACF88488.1|
           At2g43540 [Arabidopsis thaliana]
           gi|330255194|gb|AEC10288.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 169

 Score =  148 bits (374), Expect = 7e-34
 Identities = 74/161 (45%), Positives = 109/161 (67%), Gaps = 2/161 (1%)
 Frame = -3

Query: 641 KRVSKSLQDSPQFTTTCNSVYENCLNLTQHAFPGIRPYQLVHAXXXXXXXXXXXXXL-IK 465
           KRV+  L +SP+F + C+S Y+  L+L QHAF G+RPYQLV A               I 
Sbjct: 7   KRVTTILSNSPEFDSACDSAYDESLSLAQHAFAGVRPYQLVSAAAHIHRNLSALRFPLIT 66

Query: 464 KWVPSPPTQNQVDTALS-TITKNSPDQNSETLNQTIFKEFAVEVFKDVIVYNAGKAVVER 288
           +W+ SPP+Q+QVD+AL  T+++ +     E L Q  FK++AVEVF + +V NA K +  R
Sbjct: 67  RWLSSPPSQSQVDSALRVTVSRVTAADEEEILGQEEFKKWAVEVFAEAVVGNARKTIASR 126

Query: 287 VPFGIVGIAGIGILTKSGKEVVGSVMGVYALGVATAIYVSL 165
           +P GIVGI GIG +T+SG+ ++G+ +GVYA+GVAT++++SL
Sbjct: 127 IPLGIVGIGGIGAVTRSGQNLIGAAIGVYAIGVATSVFLSL 167


>ref|XP_002310418.1| predicted protein [Populus trichocarpa] gi|222853321|gb|EEE90868.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score =  145 bits (365), Expect = 8e-33
 Identities = 75/169 (44%), Positives = 103/169 (60%), Gaps = 8/169 (4%)
 Frame = -3

Query: 641 KRVSKSLQDSPQFTTTCNSVYENCLNLTQHAFPGIRPYQLVHAXXXXXXXXXXXXXL--- 471
           KRV  +L +S +F   C+S + +CL+LTQHAF GI PYQL  A                 
Sbjct: 7   KRVKTTLSNSQEFNLACDSTFTHCLSLTQHAFQGILPYQLPTATTYLHTTLTTTAAAAPL 66

Query: 470 IKKWVPSPPTQNQVDTALSTITKNSPDQNSETLNQTI-----FKEFAVEVFKDVIVYNAG 306
           I KWVPSPPT+ Q+D AL  +    P    E   + I     F+E+A+ +F +  V NAG
Sbjct: 67  ILKWVPSPPTRGQIDWALRMVANRKPGAAQEEKGELILEHAKFREWALVLFTEAAVGNAG 126

Query: 305 KAVVERVPFGIVGIAGIGILTKSGKEVVGSVMGVYALGVATAIYVSLAG 159
           KA++ R+P G+ GI G+G + K GKEVVG+ +GVYALGV T++Y+SL+G
Sbjct: 127 KAILGRLPLGVAGIVGVGAVVKGGKEVVGAAIGVYALGVVTSVYLSLSG 175


Top