BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003309
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001058845.1| Os07g0134800 [Oryza sativa Japonica Group] g...   321   7e-86
ref|XP_002463806.1| hypothetical protein SORBIDRAFT_01g006490 [S...   319   3e-85
ref|XP_003537583.1| PREDICTED: succinate dehydrogenase [ubiquino...   318   3e-85
ref|XP_003537582.1| PREDICTED: succinate dehydrogenase [ubiquino...   318   3e-85
ref|XP_002530482.1| succinate dehydrogenase, putative [Ricinus c...   318   4e-85

>ref|NP_001058845.1| Os07g0134800 [Oryza sativa Japonica Group]
           gi|75135397|sp|Q6ZDY8.1|DHSA_ORYSJ RecName:
           Full=Succinate dehydrogenase [ubiquinone] flavoprotein
           subunit, mitochondrial; AltName: Full=Flavoprotein
           subunit of complex II; Short=FP; Flags: Precursor
           gi|34394418|dbj|BAC83515.1| putative succinate
           dehydrogenase flavoprotein alpha subunit [Oryza sativa
           Japonica Group] gi|113610381|dbj|BAF20759.1|
           Os07g0134800 [Oryza sativa Japonica Group]
           gi|215686878|dbj|BAG89728.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218199047|gb|EEC81474.1| hypothetical protein
           OsI_24801 [Oryza sativa Indica Group]
          Length = 630

 Score =  321 bits (822), Expect = 7e-86
 Identities = 163/199 (81%), Positives = 167/199 (83%)
 Frame = +3

Query: 3   MDSSGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTXXXXXXXXXXX 182
           MDS GTCQGVIALNMEDGTLHRFRA +TILATGGYGRAYFSATSAHTCT           
Sbjct: 210 MDSEGTCQGVIALNMEDGTLHRFRATNTILATGGYGRAYFSATSAHTCTGDGNAMV---- 265

Query: 183 XXXXXXXXXXXXXXXXXXARAGLPLEDLEFVQFHPTGIYGVGCLITEGSRGEGGILRNSE 362
                             ARAGLPL+DLEFVQFHPTGIYG GCLITEGSRGEGGILRNSE
Sbjct: 266 ------------------ARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSE 307

Query: 363 GERFMERYAPTAKDLASRDIVSRSMTLEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPG 542
           GERFMERYAPTAKDLASRD+VSRSMT+EIREGRGVGPLKDHIYLHLNHLPPEVLKERLPG
Sbjct: 308 GERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPG 367

Query: 543 ISETAAIFAGVDVTKEPIP 599
           ISETAAIFAGVDVTKEPIP
Sbjct: 368 ISETAAIFAGVDVTKEPIP 386


>ref|XP_002463806.1| hypothetical protein SORBIDRAFT_01g006490 [Sorghum bicolor]
           gi|241917660|gb|EER90804.1| hypothetical protein
           SORBIDRAFT_01g006490 [Sorghum bicolor]
          Length = 620

 Score =  319 bits (817), Expect = 3e-85
 Identities = 162/199 (81%), Positives = 167/199 (83%)
 Frame = +3

Query: 3   MDSSGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTXXXXXXXXXXX 182
           MD+ G CQGVIALNMEDGTLHRFRAA+TILATGGYGRAYFSATSAHTCT           
Sbjct: 200 MDNEGICQGVIALNMEDGTLHRFRAANTILATGGYGRAYFSATSAHTCTGDGNAMV---- 255

Query: 183 XXXXXXXXXXXXXXXXXXARAGLPLEDLEFVQFHPTGIYGVGCLITEGSRGEGGILRNSE 362
                             ARAGLPL+DLEFVQFHPTGIYG GCLITEGSRGEGGILRNSE
Sbjct: 256 ------------------ARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSE 297

Query: 363 GERFMERYAPTAKDLASRDIVSRSMTLEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPG 542
           GERFMERYAPTAKDLASRD+VSRSMT+EIREGRGVGPLKDHIYLHLNHLPPEVLKERLPG
Sbjct: 298 GERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPG 357

Query: 543 ISETAAIFAGVDVTKEPIP 599
           ISETAAIFAGVDVTKEPIP
Sbjct: 358 ISETAAIFAGVDVTKEPIP 376


>ref|XP_003537583.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial-like isoform 2 [Glycine max]
          Length = 622

 Score =  318 bits (816), Expect = 3e-85
 Identities = 161/199 (80%), Positives = 168/199 (84%)
 Frame = +3

Query: 3   MDSSGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTXXXXXXXXXXX 182
           M+S GTCQGVIALNMEDGTLHRF+AASTILATGGYGRAYFSATSAHTCT           
Sbjct: 202 MNSDGTCQGVIALNMEDGTLHRFKAASTILATGGYGRAYFSATSAHTCTGDGNAMV---- 257

Query: 183 XXXXXXXXXXXXXXXXXXARAGLPLEDLEFVQFHPTGIYGVGCLITEGSRGEGGILRNSE 362
                             ARAG+PLEDLEFVQFHPTGIYG GCLITEGSRGEGGILRNSE
Sbjct: 258 ------------------ARAGIPLEDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSE 299

Query: 363 GERFMERYAPTAKDLASRDIVSRSMTLEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPG 542
           GERFMERYAPTAKDLASRD+VSR+MT+EIREGRGVGPLKDHIYLHLNHLPP+VLKERLPG
Sbjct: 300 GERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPG 359

Query: 543 ISETAAIFAGVDVTKEPIP 599
           ISETAAIFAGVDVTKEPIP
Sbjct: 360 ISETAAIFAGVDVTKEPIP 378


>ref|XP_003537582.1| PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein
           subunit 1, mitochondrial-like isoform 1 [Glycine max]
          Length = 630

 Score =  318 bits (816), Expect = 3e-85
 Identities = 161/199 (80%), Positives = 168/199 (84%)
 Frame = +3

Query: 3   MDSSGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTXXXXXXXXXXX 182
           M+S GTCQGVIALNMEDGTLHRF+AASTILATGGYGRAYFSATSAHTCT           
Sbjct: 210 MNSDGTCQGVIALNMEDGTLHRFKAASTILATGGYGRAYFSATSAHTCTGDGNAMV---- 265

Query: 183 XXXXXXXXXXXXXXXXXXARAGLPLEDLEFVQFHPTGIYGVGCLITEGSRGEGGILRNSE 362
                             ARAG+PLEDLEFVQFHPTGIYG GCLITEGSRGEGGILRNSE
Sbjct: 266 ------------------ARAGIPLEDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSE 307

Query: 363 GERFMERYAPTAKDLASRDIVSRSMTLEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPG 542
           GERFMERYAPTAKDLASRD+VSR+MT+EIREGRGVGPLKDHIYLHLNHLPP+VLKERLPG
Sbjct: 308 GERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPG 367

Query: 543 ISETAAIFAGVDVTKEPIP 599
           ISETAAIFAGVDVTKEPIP
Sbjct: 368 ISETAAIFAGVDVTKEPIP 386


>ref|XP_002530482.1| succinate dehydrogenase, putative [Ricinus communis]
           gi|223529979|gb|EEF31905.1| succinate dehydrogenase,
           putative [Ricinus communis]
          Length = 622

 Score =  318 bits (815), Expect = 4e-85
 Identities = 161/199 (80%), Positives = 168/199 (84%)
 Frame = +3

Query: 3   MDSSGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTXXXXXXXXXXX 182
           M+S G+CQGVIA+NMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCT           
Sbjct: 202 MNSDGSCQGVIAMNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMV---- 257

Query: 183 XXXXXXXXXXXXXXXXXXARAGLPLEDLEFVQFHPTGIYGVGCLITEGSRGEGGILRNSE 362
                             ARAGLPL+DLEFVQFHPTGIYG GCLITEGSRGEGGILRNSE
Sbjct: 258 ------------------ARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSE 299

Query: 363 GERFMERYAPTAKDLASRDIVSRSMTLEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPG 542
           GERFMERYAPTAKDLASRD+VSRSMT+EIREGRGVGPLKDHIYLHLNHLPP+VLKERLPG
Sbjct: 300 GERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPG 359

Query: 543 ISETAAIFAGVDVTKEPIP 599
           ISETAAIFAGVDVTKEPIP
Sbjct: 360 ISETAAIFAGVDVTKEPIP 378