BLASTX nr result

ID: Coptis21_contig00003304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003304
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632516.1| PREDICTED: uncharacterized protein LOC100854...    74   2e-11
ref|XP_002307117.1| predicted protein [Populus trichocarpa] gi|2...    66   4e-09
ref|XP_002335471.1| predicted protein [Populus trichocarpa] gi|2...    66   4e-09
ref|XP_002533928.1| conserved hypothetical protein [Ricinus comm...    65   6e-09
gb|ADB93061.1| hypothetical protein [Jatropha curcas]                  64   2e-08

>ref|XP_003632516.1| PREDICTED: uncharacterized protein LOC100854604 [Vitis vinifera]
           gi|147845604|emb|CAN78486.1| hypothetical protein
           VITISV_024015 [Vitis vinifera]
          Length = 89

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 15/89 (16%)
 Frame = +2

Query: 158 MADIAILIAEEYERRVKEYQKG------------EDITLVSCVSVMGQRLNELSWAKV-- 295
           M+DIA+L+AEEYERRVK  +K             E+I  VS VS +  RL   SW K   
Sbjct: 1   MSDIAMLVAEEYERRVKNSKKSGGGGEGGGGAAAEEIGFVSSVSAIAMRLEGFSWVKKAV 60

Query: 296 -QEKTELAKRILDPKSSFGLAACNGLFSA 379
            +E TE+ K +L+PKS  GLAA NG FSA
Sbjct: 61  GEENTEIVKWVLEPKSQIGLAAINGFFSA 89


>ref|XP_002307117.1| predicted protein [Populus trichocarpa] gi|222856566|gb|EEE94113.1|
           predicted protein [Populus trichocarpa]
          Length = 77

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 7/81 (8%)
 Frame = +2

Query: 158 MADIAILIAEEYERRVKEYQK---GE---DITLVSCVSVMGQRLNELSWAKV-QEKTELA 316
           M+DIA+L+AEEYERRVK  +K   GE   +I  VSC SV  +R+     +K+ +EK EL 
Sbjct: 1   MSDIAMLVAEEYERRVKHSRKAAGGEGDMEINRVSCASVRFRRIK----SKIGKEKMELL 56

Query: 317 KRILDPKSSFGLAACNGLFSA 379
           K  L+PKSS GLAA +G FSA
Sbjct: 57  KMALEPKSSMGLAASDGFFSA 77


>ref|XP_002335471.1| predicted protein [Populus trichocarpa]
           gi|224096243|ref|XP_002310589.1| predicted protein
           [Populus trichocarpa] gi|222834230|gb|EEE72707.1|
           predicted protein [Populus trichocarpa]
           gi|222853492|gb|EEE91039.1| predicted protein [Populus
           trichocarpa]
          Length = 77

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 42/81 (51%), Positives = 53/81 (65%), Gaps = 7/81 (8%)
 Frame = +2

Query: 158 MADIAILIAEEYERRVKEYQK---GE---DITLVSCVSVMGQRL-NELSWAKVQEKTELA 316
           M+DIAIL+AEEYERRVK  +K   GE   +I  VSC SV+ Q + N +     +EK EL 
Sbjct: 1   MSDIAILVAEEYERRVKNSRKAAGGEGDMEINWVSCASVLAQSIKNNIG----KEKMELL 56

Query: 317 KRILDPKSSFGLAACNGLFSA 379
           K +L+P+S   LAA NG FSA
Sbjct: 57  KLVLEPRSQVSLAASNGFFSA 77


>ref|XP_002533928.1| conserved hypothetical protein [Ricinus communis]
           gi|223526108|gb|EEF28457.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 78

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 42/81 (51%), Positives = 51/81 (62%), Gaps = 7/81 (8%)
 Frame = +2

Query: 158 MADIAILIAEEYERRVKEYQKGE------DITLVSCVSVMGQRLNELSWAKVQEKTEL-A 316
           MADIA+L+AEEYERRVK  +K        +I  VSCVS+  Q L       +QE  EL A
Sbjct: 1   MADIAMLVAEEYERRVKNSRKASADNGEVEINWVSCVSLATQSLKN---KFMQENIELIA 57

Query: 317 KRILDPKSSFGLAACNGLFSA 379
           K +L+PK+  GLAA NG FSA
Sbjct: 58  KWVLEPKTQIGLAASNGFFSA 78


>gb|ADB93061.1| hypothetical protein [Jatropha curcas]
          Length = 75

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
 Frame = +2

Query: 158 MADIAILIAEEYERRVKEYQKGEDITL---VSCVSVMGQRLNELSWAKVQEKTELAKRIL 328
           MADIAIL+AEEYERRVK  +KG        V+ VS + +R+   ++   QE  E+ K  L
Sbjct: 1   MADIAILVAEEYERRVKNSRKGSGADTKIEVNWVSSISERVK--NFKVEQENLEIVKWFL 58

Query: 329 DPKSSFGLAACNGLFSA 379
           DPK+  G+AA NG FSA
Sbjct: 59  DPKTQIGVAASNGFFSA 75


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