BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003287
         (1190 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vi...   193   6e-47
ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vi...   191   3e-46
gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]       171   3e-40
gb|ABK93977.1| unknown [Populus trichocarpa]                          167   4e-39
ref|XP_002527449.1| Histone deacetylase 2a, putative [Ricinus co...   167   5e-39

>ref|XP_002270966.2| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
          Length = 300

 Score =  193 bits (491), Expect = 6e-47
 Identities = 128/303 (42%), Positives = 164/303 (54%), Gaps = 2/303 (0%)
 Frame = +2

Query: 2   VPAVEDSMLHISQAALGEVKKERGNESVLLYATVDGKKIVLGTLSTEKCTQITYDLVFDK 181
           V + +D +LH+SQAALGE KKE+GNESV L+  +D +K+VLGTL      Q+++DLVFDK
Sbjct: 16  VKSEDDKILHLSQAALGESKKEKGNESVPLFLKIDQQKLVLGTLLPANIPQLSFDLVFDK 75

Query: 182 DFELSHSWKNGSVYFIGYQVEMAAXXXXXXXXXXXXXXXXXXXAPPLVAAAANGKPEPKV 361
           +FELSH+WKNGSV+F+GY+  +                         V A  NGKPEPKV
Sbjct: 76  EFELSHNWKNGSVFFMGYKSVLPDEEEFSEFDDSDSEEDLP------VNAIENGKPEPKV 129

Query: 362 EKPKASADKAKVVKPETSVAKPNAKIAKPVKDDKPKVXXXXXXXXXXXXXXXXXXXXXXX 541
           E+ KA    A   K +  V +P  K AK  +DD                           
Sbjct: 130 EQAKAVPTNANAGKAKVKVEEP-PKDAKDEEDD--------DDDSDEDMVDEDSDEDSDE 180

Query: 542 XXMLEAEGXXXXXXXXXXXXXXPTPEVKASKKRPAAESAMKTPVLEKKAKLVTPKKSGGE 721
             M +AE               P  +V+  KKRP  ESA KTPV  KKAKLV+P+K+  +
Sbjct: 181 DIMSDAE-DGSDEGSESEDEETPKKKVEPGKKRP-TESATKTPVPAKKAKLVSPQKT--D 236

Query: 722 GKKSNTHPHTATPHPSKQAGKSNA--DXXXXXXXXXXXXHTCKSCTKTFNSDGALQSHTK 895
           GKK     HTATPHP+K+AGK+ A  D             +CKSC+KTFNS+ ALQSH+K
Sbjct: 237 GKKGGA--HTATPHPNKKAGKTPASGDKGKGQSPKSGGQVSCKSCSKTFNSENALQSHSK 294

Query: 896 AKH 904
           AKH
Sbjct: 295 AKH 297


>ref|XP_002277422.1| PREDICTED: histone deacetylase HDT1-like [Vitis vinifera]
          Length = 307

 Score =  191 bits (485), Expect = 3e-46
 Identities = 118/301 (39%), Positives = 155/301 (51%), Gaps = 4/301 (1%)
 Frame = +2

Query: 14  EDSMLHISQAALGEVKKERGNESVLLYATVDGKKIVLGTLSTEKCTQITYDLVFDKDFEL 193
           +D ++HISQA+LGE+KK++GNE V LYA + G+K+VLGTLS EK  QI++DLVF+K FEL
Sbjct: 20  DDMLVHISQASLGEIKKDKGNELVCLYANIGGQKLVLGTLSAEKFPQISFDLVFEKKFEL 79

Query: 194 SHSWKNGSVYFIGYQVEMAAXXXXXXXXXXXXXXXXXXXAPPLVAAAANGKPEP-KVEKP 370
           SH+WKNGSVYF GY+  +                       P      NGKP+  K EKP
Sbjct: 80  SHNWKNGSVYFCGYKAAIPDSDSEFEIDL------------PHNTTVDNGKPQQLKQEKP 127

Query: 371 K-ASADKAKVVKPETSVAKPNAKIAKPVKDDKPKVXXXXXXXXXXXXXXXXXXXXXXXXX 547
           + A+A + K+V+P      P        KD    +                         
Sbjct: 128 ESAAAKQVKIVEPNKDAKSPKENDDDSDKDSDESMDDEDESSEDEDMVNDRSASSEDED- 186

Query: 548 MLEAEGXXXXXXXXXXXXXXPTPEVKASKKRPAAESAMKTPVLEKKAKLVTPKKSGGEGK 727
             + E                TP+     K+   ES  KTPV +KKAK VTP+K+G + K
Sbjct: 187 --DDENEDNEDDKNEISKKKETPKKAGPSKKRPTESVSKTPVPDKKAKFVTPQKTGDDDK 244

Query: 728 KSNTHPHTATPHPSKQAGK--SNADXXXXXXXXXXXXHTCKSCTKTFNSDGALQSHTKAK 901
           KS    H ATP+PSKQAGK  +N +             +CKSC ++FNS+ ALQSHTKAK
Sbjct: 245 KSG--GHVATPYPSKQAGKTPANTEKPKQQVQKSGGSFSCKSCNRSFNSENALQSHTKAK 302

Query: 902 H 904
           H
Sbjct: 303 H 303


>gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]
          Length = 295

 Score =  171 bits (434), Expect = 3e-40
 Identities = 118/294 (40%), Positives = 154/294 (52%)
 Frame = +2

Query: 23  MLHISQAALGEVKKERGNESVLLYATVDGKKIVLGTLSTEKCTQITYDLVFDKDFELSHS 202
           +LH+SQA+LGE+KK++  +SV L   +DGKK+VLGTLS++K  Q  +DLVFD+DFELSH+
Sbjct: 23  VLHLSQASLGELKKDKA-QSVCLSVNIDGKKLVLGTLSSDKVPQQQFDLVFDRDFELSHN 81

Query: 203 WKNGSVYFIGYQVEMAAXXXXXXXXXXXXXXXXXXXAPPLVAAAANGKPEPKVEKPKASA 382
           WK+GSVYF GY+   A                     P  +  A NGKPE KV++    A
Sbjct: 82  WKSGSVYFFGYK---ATNPFEEEEDDEDDEEESDEDIP--LTIANNGKPEAKVKE----A 132

Query: 383 DKAKVVKPETSVAKPNAKIAKPVKDDKPKVXXXXXXXXXXXXXXXXXXXXXXXXXMLEAE 562
           +K+ V K   S  K   KI +P KD K                            M E E
Sbjct: 133 EKSNVAKDSAS-GKQKVKIVEPSKDAK--------ADDEDESTDEDEMSEDEDSDMGEGE 183

Query: 563 GXXXXXXXXXXXXXXPTPEVKASKKRPAAESAMKTPVLEKKAKLVTPKKSGGEGKKSNTH 742
                             + +  KKR  A+SA KTPV +KKAK VTP+K+  +GKK +  
Sbjct: 184 DESDGDDESDEGEEETPKKAEPGKKR-KADSATKTPVPDKKAKFVTPQKT--DGKKGS-- 238

Query: 743 PHTATPHPSKQAGKSNADXXXXXXXXXXXXHTCKSCTKTFNSDGALQSHTKAKH 904
            H ATPHPSKQAGKS A+            H CK+C + F S+ AL+ H+KAKH
Sbjct: 239 GHVATPHPSKQAGKSPAN-KNQQTPKSGGAHLCKTCNRGFGSENALEFHSKAKH 291


>gb|ABK93977.1| unknown [Populus trichocarpa]
          Length = 305

 Score =  167 bits (424), Expect = 4e-39
 Identities = 114/302 (37%), Positives = 148/302 (49%), Gaps = 8/302 (2%)
 Frame = +2

Query: 23  MLHISQAALGEVKKERGNESVLLYATVDGKKIVLGTLSTEKCTQITYDLVFDKDFELSHS 202
           +LH+SQA LGE KK++GNESV L+   D +K+VLGTLS EK  QI +DLVF+KDFELSH+
Sbjct: 23  ILHLSQACLGEAKKDKGNESVCLFVNFDDQKLVLGTLSHEKIPQIPFDLVFEKDFELSHN 82

Query: 203 WKNGSVYFIGYQVEMAAXXXXXXXXXXXXXXXXXXXAPPLVAAAANGKPEPKVEKPKASA 382
            KNGSV+F GY+V                          L     NGK E K  KP    
Sbjct: 83  LKNGSVFFSGYKVAQ---------PESDSDEFISDGEEDLPVPVDNGKEEAKQPKP---- 129

Query: 383 DKAKVVKPETSVAKPNAKIAKPVKDDKPKVXXXXXXXXXXXXXXXXXXXXXXXXXML--- 553
           +     KP+   +K   KI +P KD KPK                          M    
Sbjct: 130 ENENAAKPD---SKQKVKIVEPNKDGKPKPENDDSSDEEDDSSDDGESSDDQAMMMANDE 186

Query: 554 -----EAEGXXXXXXXXXXXXXXPTPEVKASKKRPAAESAMKTPVLEKKAKLVTPKKSGG 718
                + +                TP+     K+ +AESA K PV +KKAK VTP+K+  
Sbjct: 187 DESSEDEDDESDEDDDDSDDGDVKTPKKAEVGKKRSAESASKNPVPDKKAKFVTPQKT-- 244

Query: 719 EGKKSNTHPHTATPHPSKQAGKSNADXXXXXXXXXXXXHTCKSCTKTFNSDGALQSHTKA 898
           + KK+    H ATPHPSKQA K++A+             +C SC ++F S+ ALQSH+KA
Sbjct: 245 DLKKAGV--HIATPHPSKQAAKTSAN--SQRKEQAQKSFSCNSCNRSFGSENALQSHSKA 300

Query: 899 KH 904
           KH
Sbjct: 301 KH 302


>ref|XP_002527449.1| Histone deacetylase 2a, putative [Ricinus communis]
           gi|223533184|gb|EEF34941.1| Histone deacetylase 2a,
           putative [Ricinus communis]
          Length = 310

 Score =  167 bits (423), Expect = 5e-39
 Identities = 115/303 (37%), Positives = 148/303 (48%), Gaps = 7/303 (2%)
 Frame = +2

Query: 17  DSMLHISQAALGEVKKERGNESVLLYATVDGKKIVLGTLSTEKCTQITYDLVFDKDFELS 196
           +S++H+SQAALGE KKE+GNESV LY  VD KKI+LGTLS E   QI +D+VF+K+ ELS
Sbjct: 21  ESLIHLSQAALGESKKEKGNESVPLYVKVDNKKIILGTLSQENFPQIAFDIVFEKEVELS 80

Query: 197 HSWKNGSVYFIGYQVEMAAXXXXXXXXXXXXXXXXXXXAPPLVAAAANGKPEPKVEKPKA 376
           H+WKNGSVY  GYQ  +                       PLV A   G      +K   
Sbjct: 81  HNWKNGSVYLSGYQTPLPEEDDMFSEEESDDEEPL-----PLVNADNGGIQLAGTQK--- 132

Query: 377 SADKAKVVKPETSVAKPNAKIAKPVKDDKPKVXXXXXXXXXXXXXXXXXXXXXXXXXMLE 556
           +A K+ + KPE+S  +     AKPV+  K +                             
Sbjct: 133 AAAKSNIAKPESSTKQK----AKPVQPSKAEEASDDDDESDDDDDDEDDDEDESDDEDES 188

Query: 557 AEG----XXXXXXXXXXXXXXPTPEVKASKKRPAAESAMKTPVLEKKAKLVTPKKSGGEG 724
            EG                   TP+     K+   +SA+KTPV  KKAKL+TP+K+  +G
Sbjct: 189 EEGMSVDEDSDDEGDSESEDEETPKKADKGKKRQNDSAVKTPVSSKKAKLITPQKT-ADG 247

Query: 725 KKSNTHPHTATPHPSKQAGKS---NADXXXXXXXXXXXXHTCKSCTKTFNSDGALQSHTK 895
           KK     HTATPHP+K A  S   N               +C SC ++F SD ALQSH+K
Sbjct: 248 KKGG---HTATPHPAKGAKASANGNTPKPQTQTPKSGGKFSCNSCERSFGSDAALQSHSK 304

Query: 896 AKH 904
           AKH
Sbjct: 305 AKH 307