BLASTX nr result

ID: Coptis21_contig00003252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003252
         (3327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283115.1| PREDICTED: uncharacterized protein LOC100267...   526   e-171
ref|XP_003534409.1| PREDICTED: uncharacterized protein LOC100818...   488   e-160
ref|XP_002510980.1| zinc finger protein, putative [Ricinus commu...   483   e-158
ref|XP_002326610.1| predicted protein [Populus trichocarpa] gi|2...   442   e-146
ref|XP_002303489.1| predicted protein [Populus trichocarpa] gi|2...   397   e-132

>ref|XP_002283115.1| PREDICTED: uncharacterized protein LOC100267539 [Vitis vinifera]
          Length = 794

 Score =  526 bits (1355), Expect(2) = e-171
 Identities = 281/477 (58%), Positives = 314/477 (65%), Gaps = 13/477 (2%)
 Frame = +2

Query: 233  EDLHVLVEAETQEALDAAAGMVEKLLQPVDEGLNEHKRQQLRELAALNGTIRDDEFCRLC 412
            EDLHVLVEA+TQEALDAAAGMVEKLLQPVDE LNEHKRQQLRELAALNGTIRD+E+CRLC
Sbjct: 324  EDLHVLVEADTQEALDAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTIRDEEYCRLC 383

Query: 413  GEAGHRQYACPSRTNTFKSDVLCKVCGDGGHPTIDCPMKGTVGKKMDDEYQNFLAELGGN 592
            GE GHRQYACPSRT+TFKSDVLCK+CGDGGHPTIDCP+KGT GKKMDDEYQNFLAELGG 
Sbjct: 384  GEPGHRQYACPSRTSTFKSDVLCKICGDGGHPTIDCPVKGTTGKKMDDEYQNFLAELGGT 443

Query: 593  GPESLTKQSSTLPILGANSSGSNPPWXXXXXXXXXXXXXQTGLPGIGVTTGKDYDDTNLY 772
             P+SL K ++ LPI G++ SGSNPPW             Q GL   G    K+YDDTNLY
Sbjct: 444  VPDSLIKPNNALPITGSSGSGSNPPW-----SNNAGGTAQAGLGANGAKPIKEYDDTNLY 498

Query: 773  IGYLPPNLDDDGLIRLFSPFGQIAMAKVIKDRVTGLSKGYGFVKYSDTDQANQAITGMNG 952
            IGYLPP L+DD LIRLFSPFG I MAKVIKDRVTGLSKGYGFVKYSD  QAN AI  MNG
Sbjct: 499  IGYLPPTLEDDALIRLFSPFGDIVMAKVIKDRVTGLSKGYGFVKYSDVQQANSAIASMNG 558

Query: 953  YRLEGRVIAVRVAGKXXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXFTXXXXXXXXXXX 1132
            YRLEGR IAVRVAGK                 Y              FT           
Sbjct: 559  YRLEGRTIAVRVAGKPPQPAVPPGPPPPAMPTYPSSNQAVGAYPSQQFTAGGPLGNTPPP 618

Query: 1133 XXXXXXXXXXXXXXXXXXXXXXXXXGSNIFTPVQGQSVPSYGAPY---PPSFQTHPPGTA 1303
                                     GS+++TPV GQ VP YG  Y   PP  Q+   G  
Sbjct: 619  SYAPGAPVPWGPVPPPYAPYPPPPPGSSLYTPVPGQPVPPYGVQYPPPPPPTQSVSAGAP 678

Query: 1304 SHSAPSSEVPQSFPPAVQSQNCTSVPSGPTNMYG-----VPSNVQPSYPPASFGYPSYYG 1468
            + +  SSE  Q+FPP VQS++ +SV S PT++YG     +P N QP+Y  +S+GY SYYG
Sbjct: 679  AQTVVSSEAQQNFPPGVQSESGSSVQSVPTSVYGSSLSAIPPNPQPAYSTSSYGY-SYYG 737

Query: 1469 VAPSAS-----QSTVDSQNMGAAPWASSQPTPVPVSSAEQKTQGADSEYEKFMAEMK 1624
            VAP             SQNMG APW+S+ P P PV  AE+KT G D+EYEKFMAEMK
Sbjct: 738  VAPPPPLPVPYPMADQSQNMGNAPWSSAPPVPPPVPPAEKKTHGTDAEYEKFMAEMK 794



 Score =  105 bits (263), Expect(2) = e-171
 Identities = 49/55 (89%), Positives = 54/55 (98%)
 Frame = +3

Query: 3   FIGLIIGPRGNTQKRMEKDTGAKIVIRGKGSIKEGRMGQKRDLKPDPAENEDLHV 167
           FIGLIIGPRGNTQKRME++TGAKIVIRGKGS+KEGR+ QKRDLKPDP+ENEDLHV
Sbjct: 274 FIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKEGRLQQKRDLKPDPSENEDLHV 328


>ref|XP_003534409.1| PREDICTED: uncharacterized protein LOC100818518 [Glycine max]
          Length = 780

 Score =  488 bits (1255), Expect(2) = e-160
 Identities = 270/493 (54%), Positives = 304/493 (61%), Gaps = 29/493 (5%)
 Frame = +2

Query: 233  EDLHVLVEAETQEALDAAAGMVEKLLQPVDEGLNEHKRQQLRELAALNGTIRDDEFCRLC 412
            EDLHVLVEAET E+L+AAAGMVEKLLQPVDE LNEHKRQQLRELAALNGTIRD+E+CRLC
Sbjct: 294  EDLHVLVEAETPESLEAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTIRDEEYCRLC 353

Query: 413  GEAGHRQYACPSRTNTFKSDVLCKVCGDGGHPTIDCPMKGTVGKKMDDEYQNFLAELGGN 592
            GE GHRQYACP+RT+TFKS+V+CK CGDGGHP+IDCP+KG  GKKMDDEYQNFLAELGG+
Sbjct: 354  GEPGHRQYACPTRTSTFKSEVVCKHCGDGGHPSIDCPVKGATGKKMDDEYQNFLAELGGS 413

Query: 593  GPESLTKQSSTLPILGANSSGSNPPWXXXXXXXXXXXXXQTGLPGIGVTTGKDYDDTNLY 772
             PES TKQ+STL I GA +SGSNPPW             Q GL    V   K+ DDTNLY
Sbjct: 414  VPESATKQTSTLAI-GAGTSGSNPPW--ANNSGTVGGAPQAGLGAAAVK--KEIDDTNLY 468

Query: 773  IGYLPPNLDDDGLIRLFSPFGQIAMAKVIKDRVTGLSKGYGFVKYSDTDQANQAITGMNG 952
            IGYLPPNLDDDGLI+LF  FG+I MAKVIKDR++GLSKGYGFVKY+D   AN AI  MNG
Sbjct: 469  IGYLPPNLDDDGLIQLFQQFGEIVMAKVIKDRMSGLSKGYGFVKYADITMANNAILAMNG 528

Query: 953  YRLEGRVIAVRVAGKXXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXFTXXXXXXXXXXX 1132
            YRLEGR IAVRVAGK                 Y              +T           
Sbjct: 529  YRLEGRTIAVRVAGKPPQPVVPPGPPASAVPTYPVPSQPLGAYPSQQYTAGGPIGTAPPG 588

Query: 1133 XXXXXXXXXXXXXXXXXXXXXXXXXGSNIFTPVQGQSVPSYGAPYPPSFQTHPPGTASHS 1312
                                     GS ++ P+QGQ +P YG  YPP   T PPG  S  
Sbjct: 589  SYGGAPVPWGPPVPPPYASYAPPPPGSTMYPPMQGQHMPPYGVQYPPPVPTGPPGAPSQP 648

Query: 1313 APSSEVPQSFPPAVQSQNCTSVPSGPTNMY---GVPSNVQPSYPPASFGYPSYYGV---- 1471
            A SSEV QS+PP VQS N  S  S P NMY   G P   QP+Y PAS+GYP YY      
Sbjct: 649  ATSSEVQQSYPPGVQSDNNNSTQSVPANMYGNSGPPIPPQPTY-PASYGYPPYYNAVPPP 707

Query: 1472 ----APSASQSTVDSQNMGAAPWASSQPTPVPVSSAEQKT------------------QG 1585
                AP    ++  S N+   PWAS+   P P SSA+ ++                    
Sbjct: 708  PPPSAPMPVSTSDQSHNIANVPWASNSLVPPPASSADNQSHSIGNVPRATNPSVPPPASS 767

Query: 1586 ADSEYEKFMAEMK 1624
            ADSEYEKFMAEMK
Sbjct: 768  ADSEYEKFMAEMK 780



 Score =  107 bits (266), Expect(2) = e-160
 Identities = 50/55 (90%), Positives = 54/55 (98%)
 Frame = +3

Query: 3   FIGLIIGPRGNTQKRMEKDTGAKIVIRGKGSIKEGRMGQKRDLKPDPAENEDLHV 167
           FIGLIIGPRGNTQKRMEK+TGAKIVIRGKGS+KEGR+ QKRDLKPDP+ENEDLHV
Sbjct: 244 FIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQQKRDLKPDPSENEDLHV 298


>ref|XP_002510980.1| zinc finger protein, putative [Ricinus communis]
            gi|223550095|gb|EEF51582.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 798

 Score =  483 bits (1242), Expect(2) = e-158
 Identities = 275/487 (56%), Positives = 301/487 (61%), Gaps = 23/487 (4%)
 Frame = +2

Query: 233  EDLHVLVEAETQEALDAAAGMVEKLLQPVDEGLNEHKRQQLRELAALNGTIRDDEFCRLC 412
            EDLHVLVEAETQEALDAAAGMVEKLLQPVDE LNEHKRQQLRELAALNGTIRD+E+CRLC
Sbjct: 322  EDLHVLVEAETQEALDAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTIRDEEYCRLC 381

Query: 413  GEAGHRQYACPSRTNTFKSDVLCKVCGDGGHPTIDCPMKGTVGKKMDDEYQNFLAELGGN 592
            GE GHRQYACPSRT TFKSDVLCK+CGDGGHPTIDCP+KGT GKKMDDEYQNFLAELGG 
Sbjct: 382  GEQGHRQYACPSRTTTFKSDVLCKICGDGGHPTIDCPVKGTTGKKMDDEYQNFLAELGGT 441

Query: 593  GPESLTKQSSTLPILGANSSGSNPPWXXXXXXXXXXXXXQTGLPGIGVTTGKDYDDTNLY 772
             PES TKQ++TL  LG  SSGSNPPW               GL   GV   K+YDDTNLY
Sbjct: 442  MPESSTKQTATL-ALGPGSSGSNPPWSSSNTGGLGSANQAGGLGANGVKPIKEYDDTNLY 500

Query: 773  IGYLPPNLDDDGLIRLFSPFGQIAMAKVIKDRVTGLSKGYGFVKYSDTDQANQAITGMNG 952
            IGYLPPNLDDDGLI LFS FG I MAKVIKDRVTG+SKGYGFVKY D   AN AI  MNG
Sbjct: 501  IGYLPPNLDDDGLIGLFSAFGDIVMAKVIKDRVTGVSKGYGFVKYRDIQMANNAIASMNG 560

Query: 953  YRLEGRVIAVRVAGKXXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXFTXXXXXXXXXXX 1132
            YR++GR IAVRVAGK                 Y              FT           
Sbjct: 561  YRIDGRTIAVRVAGKPPQPTVPPGPPASTMPAYPIASQPVGAYPSQQFT---------PG 611

Query: 1133 XXXXXXXXXXXXXXXXXXXXXXXXXGSNIFTPVQGQSVPSYGAP-YPP-SFQTHPP---- 1294
                                     G  +  P    + P  G+  YPP   Q  PP    
Sbjct: 612  GPLPNAPPAGYAGPPASYGGAPVPWGPPVPPPYAPYAPPPPGSTMYPPVPGQPMPPYGYP 671

Query: 1295 --------GTASHSAPSSEVPQSFPPAVQSQNCTSVPSGPTNMY----GVPSNVQPSYPP 1438
                    G  + +  SSE  QS+PP VQS+N TS P   +N+Y     VPS  QP+Y  
Sbjct: 672  PPVQPAPSGAPTPTVTSSEAQQSYPPGVQSENSTSAPPSSSNIYCSSVAVPSGAQPAYVT 731

Query: 1439 ASFGYPSYYGVAPS---ASQSTVD-SQNMGAAPWASSQPTPVPVSSAEQKT-QGADSEYE 1603
            AS GY SYY   P+   A  ST D +Q +   PWA + P P PVSS+ +KT  GADSEYE
Sbjct: 732  ASLGYSSYYNAVPTPPPAPASTGDHTQGISNVPWAPNPPLPPPVSSSSEKTAYGADSEYE 791

Query: 1604 KFMAEMK 1624
            KFMAEMK
Sbjct: 792  KFMAEMK 798



 Score =  105 bits (263), Expect(2) = e-158
 Identities = 49/55 (89%), Positives = 54/55 (98%)
 Frame = +3

Query: 3   FIGLIIGPRGNTQKRMEKDTGAKIVIRGKGSIKEGRMGQKRDLKPDPAENEDLHV 167
           FIGLIIGPRGNTQKRME++TGAKIVIRGKGS+KEGR+ QKRDLKPDP+ENEDLHV
Sbjct: 272 FIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKEGRLQQKRDLKPDPSENEDLHV 326


>ref|XP_002326610.1| predicted protein [Populus trichocarpa] gi|222833932|gb|EEE72409.1|
            predicted protein [Populus trichocarpa]
          Length = 704

 Score =  442 bits (1136), Expect(2) = e-146
 Identities = 254/468 (54%), Positives = 279/468 (59%), Gaps = 24/468 (5%)
 Frame = +2

Query: 233  EDLHVLVEAETQEALDAAAGMVEKLLQPVDEGLNEHKRQQLRELAALNGTIRDDEFCRLC 412
            EDLHVLVEA+TQEALDAAAGMVEKLLQPVDE LNEHKRQQLRELA LNGTIRD+E+CRLC
Sbjct: 253  EDLHVLVEADTQEALDAAAGMVEKLLQPVDEVLNEHKRQQLRELATLNGTIRDEEYCRLC 312

Query: 413  GEAGHRQYACPSRTNTFKSDVLCKVCGDGGHPTIDCPMKGTVGKKMDDEYQNFLAELGGN 592
            GE GHRQYACPSRT TFKSDVLCK+CGDGGHPTIDCPMKGT GKKMDDEYQNFLAELGG 
Sbjct: 313  GEPGHRQYACPSRTTTFKSDVLCKICGDGGHPTIDCPMKGTTGKKMDDEYQNFLAELGGT 372

Query: 593  GPESLTKQSSTLPILGANSSGSNPPWXXXXXXXXXXXXXQTGLPGIGVTTGKDYDDTNLY 772
             PES TKQ++TL  LG++ SGSNPPW             Q GL   G+   K+YDDTNLY
Sbjct: 373  MPESATKQTATL-ALGSSGSGSNPPW-ASSNTGGLGSANQAGLGANGLKL-KEYDDTNLY 429

Query: 773  IGYLPPNLDDDGLIRLFSPFGQIAMAKVIKDRVTGLSKGYGFVKYSDTDQANQAITGMNG 952
            IGYLPPNLDDDGLI LFS FG+I MAKVIKDR+TGLSKGYGFVKY D   AN AI  MNG
Sbjct: 430  IGYLPPNLDDDGLIGLFSSFGEIVMAKVIKDRITGLSKGYGFVKYRDVQMANNAIASMNG 489

Query: 953  YRLEGRVIAVRVAGKXXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXFTXXXXXXXXXXX 1132
            YR++GR IAVRVAGK                 Y              FT           
Sbjct: 490  YRIDGRTIAVRVAGKPPQPTVPPGPPASTMPAYPVSTQPLGAYQSQQFT---------AG 540

Query: 1133 XXXXXXXXXXXXXXXXXXXXXXXXXGSNIFTPVQGQSVPSYGAPYPPSFQTHPP------ 1294
                                     GS +  P    + P    P PP    +PP      
Sbjct: 541  GPLPNGPPTSYTGAPANYTGTPVPWGSPVPPPYAPYAAPP--PPPPPGSTMYPPIPGQPM 598

Query: 1295 ----------------GTASHSAPSSEVPQSFPPAVQSQNCTSVPSGPTNMYGVPSNVQP 1426
                            G  + +   SE  QS+PP V S+N TS P   +N+YG  S  QP
Sbjct: 599  PPYGVQYPPLVQPVPPGAPTQTVTPSEAQQSYPPGVPSENSTSAPPATSNVYG-QSGAQP 657

Query: 1427 SYPPASFGYPSYY-GVAPSASQSTV-DSQNMGAAPWASSQPTPVPVSS 1564
            +Y   S GY SYY  V P A Q T   SQ MG  PWAS+   P P SS
Sbjct: 658  AY-TTSLGYSSYYSAVPPPAPQPTTGHSQGMGNVPWASNLTVPPPHSS 704



 Score =  105 bits (263), Expect(2) = e-146
 Identities = 49/55 (89%), Positives = 54/55 (98%)
 Frame = +3

Query: 3   FIGLIIGPRGNTQKRMEKDTGAKIVIRGKGSIKEGRMGQKRDLKPDPAENEDLHV 167
           FIGLIIGPRGNTQKRME++TGAKIVIRGKGS+KEGR+ QKRDLKPDP+ENEDLHV
Sbjct: 203 FIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKEGRLQQKRDLKPDPSENEDLHV 257


>ref|XP_002303489.1| predicted protein [Populus trichocarpa] gi|222840921|gb|EEE78468.1|
            predicted protein [Populus trichocarpa]
          Length = 794

 Score =  397 bits (1020), Expect(2) = e-132
 Identities = 199/255 (78%), Positives = 214/255 (83%)
 Frame = +2

Query: 233  EDLHVLVEAETQEALDAAAGMVEKLLQPVDEGLNEHKRQQLRELAALNGTIRDDEFCRLC 412
            EDLHVLVEAETQEALDAAAGMVEKLLQPVDE LNEHKRQQLRELAALNGTIRD+E+CRLC
Sbjct: 330  EDLHVLVEAETQEALDAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTIRDEEYCRLC 389

Query: 413  GEAGHRQYACPSRTNTFKSDVLCKVCGDGGHPTIDCPMKGTVGKKMDDEYQNFLAELGGN 592
            GE GHRQYACPSRT+TFKSDVLCK+CGDGGHPTIDCPMKGT GKKMDDEYQNFLAELGG 
Sbjct: 390  GEPGHRQYACPSRTSTFKSDVLCKICGDGGHPTIDCPMKGTAGKKMDDEYQNFLAELGGT 449

Query: 593  GPESLTKQSSTLPILGANSSGSNPPWXXXXXXXXXXXXXQTGLPGIGVTTGKDYDDTNLY 772
             PES TKQ++TL  L ++ SG+NPPW             Q GL   G+   K+YDDTNLY
Sbjct: 450  MPESATKQTATL-ALESSGSGNNPPW-AGSNTGGLGSANQAGLGANGLKP-KEYDDTNLY 506

Query: 773  IGYLPPNLDDDGLIRLFSPFGQIAMAKVIKDRVTGLSKGYGFVKYSDTDQANQAITGMNG 952
            IGYLPPNLDDDGLI LFS FG+I MAKVIKDR+TGLSKGYGFVKY D   AN AI  MNG
Sbjct: 507  IGYLPPNLDDDGLIGLFSSFGEIVMAKVIKDRITGLSKGYGFVKYCDVQMANNAIASMNG 566

Query: 953  YRLEGRVIAVRVAGK 997
            YR++GR IAVRVAGK
Sbjct: 567  YRIDGRTIAVRVAGK 581



 Score =  104 bits (259), Expect(2) = e-132
 Identities = 48/55 (87%), Positives = 53/55 (96%)
 Frame = +3

Query: 3   FIGLIIGPRGNTQKRMEKDTGAKIVIRGKGSIKEGRMGQKRDLKPDPAENEDLHV 167
           FIGLIIGPRGNTQKRME++TG KIVIRGKGS+KEGR+ QKRDLKPDP+ENEDLHV
Sbjct: 280 FIGLIIGPRGNTQKRMERETGGKIVIRGKGSVKEGRLQQKRDLKPDPSENEDLHV 334



 Score =  116 bits (291), Expect = 4e-23
 Identities = 64/142 (45%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
 Frame = +2

Query: 1208 GSNIFTPVQGQSVPSYGAPYPPSFQTHPPGTASHSAPSSEVPQSFPPAVQSQNCTSVPSG 1387
            GS ++ P+ GQ +P YG  YPP  Q  P GT + +  SSE  QS+PP V S+N  S P  
Sbjct: 664  GSTMYPPIPGQPIPPYGVQYPPPVQPVPSGTLTQTVASSEAQQSYPPGVPSENSLSAPLA 723

Query: 1388 PTNMYGVPSNVQPSYPPASFGYPSYYGVA--PSASQSTVDSQNMGAAPWASSQPTPVP-V 1558
             +N+YG            S GY SYY     P    +T  SQ MG  PWAS+   P P  
Sbjct: 724  ASNVYG-----------HSIGYSSYYSAVPPPPPPPATDHSQGMGNVPWASNSTMPPPHS 772

Query: 1559 SSAEQKTQGADSEYEKFMAEMK 1624
            SSAE+   GAD+EY KFMAEMK
Sbjct: 773  SSAEKARYGADAEYAKFMAEMK 794


Top