BLASTX nr result

ID: Coptis21_contig00003248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003248
         (1251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313325.1| predicted protein [Populus trichocarpa] gi|2...   164   4e-38
ref|XP_003599116.1| hypothetical protein MTR_3g028060 [Medicago ...   132   1e-28
ref|XP_004149739.1| PREDICTED: UPF0496 protein 4-like [Cucumis s...   115   2e-23
ref|XP_004173207.1| PREDICTED: protein BPS1, chloroplastic-like,...   113   1e-22
gb|ACU19154.1| unknown [Glycine max]                                  109   1e-21

>ref|XP_002313325.1| predicted protein [Populus trichocarpa] gi|222849733|gb|EEE87280.1|
            predicted protein [Populus trichocarpa]
          Length = 295

 Score =  164 bits (415), Expect = 4e-38
 Identities = 96/225 (42%), Positives = 146/225 (64%), Gaps = 8/225 (3%)
 Frame = -2

Query: 1013 QSSEALSASLHAFESDILNYLFQISLHSKPGVDTYSFSWIQKCLRVLPNIDKAFAKFIAD 834
            Q  EALSASL AF SD+ N + Q+ L  KPG +T SFSW+ +C +++P+I+KAFAK + D
Sbjct: 8    QQPEALSASLQAFRSDVSNCVHQLCLDLKPGSETLSFSWVLQCFQLIPSINKAFAKLVVD 67

Query: 833  IDYPITEWKSFGVEEYMKDNITLLDHLNGISSSLSHMGQACMKLLHALSHVEASP-IMLK 657
            IDY +++WKS  VEEY+K +++LLD LN ISSSLSH+ +  + L H+LS V++SP   ++
Sbjct: 68   IDYHMSKWKSQSVEEYLKYSLSLLDLLNSISSSLSHLERGRLSLAHSLSLVKSSPSSAIE 127

Query: 656  KLEAILPWCSNKKVE-----DQEEGKVSSGKDLVLHQALLVRKRVKNWICRIIDSSIRGD 492
             ++AI    S K  +     D E+ +  SG++ ++ QAL+  K V  W+C ++ + + GD
Sbjct: 128  HIKAIKFNSSIKNFKGQDNIDDEKDRPCSGEEWIIDQALIELKSVGFWVCYVLLAGLSGD 187

Query: 491  TAQACLVMKSECGGLY-NSSLGSLQSGVCEE-MKRKTVVKEVVEI 363
             A+A L M+    G++ NSS+  L   + E  M R  V+KEV E+
Sbjct: 188  -AKAYLEMRKSTTGIFSNSSVIKLDMSISEAVMDRGVVLKEVKEL 231


>ref|XP_003599116.1| hypothetical protein MTR_3g028060 [Medicago truncatula]
            gi|355488164|gb|AES69367.1| hypothetical protein
            MTR_3g028060 [Medicago truncatula]
          Length = 309

 Score =  132 bits (333), Expect = 1e-28
 Identities = 85/250 (34%), Positives = 137/250 (54%), Gaps = 10/250 (4%)
 Frame = -2

Query: 1061 LLFQRFGHTLKTSSKMQSSEALSASLHAFESDILNYLFQISLHSKPGVDTYSFSWIQKCL 882
            LLF++  H         + E  S+SLH F S +  ++ Q++L  KP  +  S SW Q C 
Sbjct: 9    LLFKKKNH--HKCYPQPNEELPSSSLHDFHSHVSKHIDQLALELKPESEILSLSWFQGCF 66

Query: 881  RVLPNIDKAFAKFIADIDYPITEWKSFGVEEYMKDNITLLDHLNGISSSLSHMGQACMKL 702
             +LP I+K FAK + DIDYP+T+W    +E Y+   ++LL+ LN ISSSLSH+G + + L
Sbjct: 67   GLLPLINKVFAKLVIDIDYPMTKWNVDSIEVYLNYTMSLLELLNSISSSLSHLGHSRLSL 126

Query: 701  LHALSHVE---ASPIMLKKLEAILP---WCSN--KKVEDQEE-GKVSSGKDLVLHQALLV 549
             H L+ VE   +  +    L+AI P   + +N  K    Q++  K+ SGK+L++ + +  
Sbjct: 127  AHGLTLVEKKKSLSLARNHLKAIQPAGCFSTNFGKSFHTQDDKAKIVSGKELIVREIVKE 186

Query: 548  RKRVKNWICRIIDSSIRGDTAQACLVMKSECGGLYNSSLGSLQSGVCEEM-KRKTVVKEV 372
             K    W+C ++ S   GD A+  + ++   GG  NS + +L   + E++ K+     E+
Sbjct: 187  MKSTGFWVCGVLLSYFYGD-AKPYMELRKIVGGFENSIVSTLDLKISEKLVKKMPCFSEI 245

Query: 371  VEINNGVVRL 342
             E+N  V RL
Sbjct: 246  KEMNKFVARL 255


>ref|XP_004149739.1| PREDICTED: UPF0496 protein 4-like [Cucumis sativus]
          Length = 280

 Score =  115 bits (288), Expect = 2e-23
 Identities = 80/235 (34%), Positives = 129/235 (54%), Gaps = 19/235 (8%)
 Frame = -2

Query: 956 YLFQISLH--------SKPGVDTYSFSWIQKCLRVLPNIDKAFAKFIADIDYPITEWKSF 801
           +L QIS+         SKP  + +SFS+I +C  +L    +AFAK + +IDYP+ + +  
Sbjct: 6   FLSQISIRLNDVGFDLSKPTSEIFSFSFINRCFELLRVQHRAFAKLLLEIDYPVRKHEGP 65

Query: 800 GVEEYMKDNITLLDHLNGISSSLSHMGQACMKLLHALSHVEASP-IMLKKLEAI-LPWCS 627
             +E++K  + LLD LN I+S ++H+GQA +KL HALS VE SP   + +L+ I     S
Sbjct: 66  SGDEFLKYTLKLLDLLNSITSCIAHLGQARLKLSHALSLVEDSPSSAIDRLKPIGTSSFS 125

Query: 626 NKKVEDQEEGKV-----SSGKDLVLHQALLVRKRVKNWICRIIDSSIRGDTAQACLVMKS 462
            + +++ E  ++      S K LV+H+AL++ K++  W+C I+ S + GD A+A L M+ 
Sbjct: 126 KEPIKEGENVEICVEVEKSEKKLVVHRALMIMKQIGLWVCGIVISGLSGD-AEAFLEMRK 184

Query: 461 ECGGLYNSSLGSL----QSGVCEEMKRKTVVKEVVEINNGVVRLQEAAKEGRHGD 309
                  S L  L       +CE   R   +KE+ E+N+ V  L  +   G+  D
Sbjct: 185 SYDEFGVSGLDRLDFIVHKAICESGVR---LKEIKEVNDAVELLVASVAAGKSSD 236


>ref|XP_004173207.1| PREDICTED: protein BPS1, chloroplastic-like, partial [Cucumis
            sativus]
          Length = 214

 Score =  113 bits (282), Expect = 1e-22
 Identities = 73/202 (36%), Positives = 117/202 (57%), Gaps = 8/202 (3%)
 Frame = -2

Query: 1046 FGHTLKTSSKMQSSEALSASLHAFESDILNYLFQISLH-SKPGVDTYSFSWIQKCLRVLP 870
            F   L+       SE  SA+   F S I   L  +    SKP  + +SFS+I +C  +L 
Sbjct: 7    FFSNLENHRHHHESEVGSAAFQGFLSQISIRLNDVGFDLSKPTSEIFSFSFINRCFELLR 66

Query: 869  NIDKAFAKFIADIDYPITEWKSFGVEEYMKDNITLLDHLNGISSSLSHMGQACMKLLHAL 690
               +AFAK + +IDYP+ + +    +E++K  + LLD LN I+S ++H+GQA +KL HAL
Sbjct: 67   VQHRAFAKLLLEIDYPVRKHEGPSGDEFLKYTLKLLDLLNSITSCIAHLGQARLKLSHAL 126

Query: 689  SHVEASPI-MLKKLEAI-LPWCSNKKVEDQEEGKV-----SSGKDLVLHQALLVRKRVKN 531
            S VEASP   + +L+ I     S + +++ E  ++      S K+LV+H+AL++ K++  
Sbjct: 127  SLVEASPSPAIDRLKPIGTSSFSKEPIKEGENVEICVEVEKSAKELVVHRALMIMKQIGL 186

Query: 530  WICRIIDSSIRGDTAQACLVMK 465
            W+C I+ S + GD A+A L M+
Sbjct: 187  WVCGIVISGLSGD-AEAFLEMR 207


>gb|ACU19154.1| unknown [Glycine max]
          Length = 186

 Score =  109 bits (273), Expect = 1e-21
 Identities = 55/118 (46%), Positives = 81/118 (68%), Gaps = 1/118 (0%)
 Frame = -2

Query: 1004 EALSASLHAFESDILNYLFQISLHSKPGVDTYSFSWIQKCLRVLPNIDKAFAKFIADIDY 825
            E LS+SL AF+S +   + Q++L  KPG +T S +W  +C  +LP I+KAFAK +ADIDY
Sbjct: 30   EELSSSLLAFKSYVSKSIDQLALDLKPGSETLSLTWFGRCFDLLPLINKAFAKLVADIDY 89

Query: 824  PITEWKSFGVE-EYMKDNITLLDHLNGISSSLSHMGQACMKLLHALSHVEASPIMLKK 654
            P+++W+ F +E  Y+   ++LL+ LN ISS  SH+GQA + L+H L+ VE SP +  K
Sbjct: 90   PMSKWEIFSIEGYYLSYTLSLLELLNSISSCFSHLGQASLSLVHGLTLVENSPSLATK 147


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