BLASTX nr result

ID: Coptis21_contig00003247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00003247
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525193.1| DNA binding protein, putative [Ricinus commu...    81   3e-22
ref|XP_004137958.1| PREDICTED: transcription factor ASG4-like [C...    81   1e-21
gb|ACH87169.1| MYB transcription factor [Camellia sinensis]            81   3e-21
gb|ABL63122.1| MYB transcription factor [Catharanthus roseus]          81   5e-21
ref|XP_002326327.1| predicted protein [Populus trichocarpa] gi|2...    79   8e-21

>ref|XP_002525193.1| DNA binding protein, putative [Ricinus communis]
           gi|223535490|gb|EEF37159.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 317

 Score = 81.3 bits (199), Expect(2) = 3e-22
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = +1

Query: 1   KKIEEYVGSKTVIQIRSHAQKYFLKVQRNGAVAHVPPPRPK 123
           KKIE++VGSKTVIQIRSHAQKYFLKVQ+NG VAHVPPPRPK
Sbjct: 99  KKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTVAHVPPPRPK 139



 Score = 48.5 bits (114), Expect(2) = 3e-22
 Identities = 24/63 (38%), Positives = 42/63 (66%), Gaps = 7/63 (11%)
 Frame = +2

Query: 224 HPYSRKSMKDASIR-------PATLSCIASGFSIWDDSAVLVNTASSGSISSQDEYTHLH 382
           HPY +K+ K+  +        P++++ +A G++ WDD+++L+NTA+S  + SQDE+T LH
Sbjct: 144 HPYPQKASKNVLLPLPASLAYPSSMNTLAPGYAPWDDTSMLINTATSKIMPSQDEFT-LH 202

Query: 383 TFE 391
             E
Sbjct: 203 GAE 205


>ref|XP_004137958.1| PREDICTED: transcription factor ASG4-like [Cucumis sativus]
           gi|449519124|ref|XP_004166585.1| PREDICTED:
           transcription factor ASG4-like [Cucumis sativus]
          Length = 288

 Score = 80.9 bits (198), Expect(2) = 1e-21
 Identities = 36/41 (87%), Positives = 40/41 (97%)
 Frame = +1

Query: 1   KKIEEYVGSKTVIQIRSHAQKYFLKVQRNGAVAHVPPPRPK 123
           KKIE++VGSKTVIQIRSHAQKYFLKVQ+NG +AHVPPPRPK
Sbjct: 58  KKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTIAHVPPPRPK 98



 Score = 47.0 bits (110), Expect(2) = 1e-21
 Identities = 20/63 (31%), Positives = 39/63 (61%), Gaps = 7/63 (11%)
 Frame = +2

Query: 224 HPYSRKSMKDASIR-------PATLSCIASGFSIWDDSAVLVNTASSGSISSQDEYTHLH 382
           HPY +K+ K+  +        P++++ +A G+S WDD+++++N + S  +  QDE+T+ H
Sbjct: 103 HPYPQKASKNVLLPLQASMGYPSSVNTLAPGYSPWDDASIMINPSLSKIMQPQDEFTNFH 162

Query: 383 TFE 391
             E
Sbjct: 163 RSE 165


>gb|ACH87169.1| MYB transcription factor [Camellia sinensis]
          Length = 289

 Score = 80.9 bits (198), Expect(2) = 3e-21
 Identities = 36/41 (87%), Positives = 40/41 (97%)
 Frame = +1

Query: 1   KKIEEYVGSKTVIQIRSHAQKYFLKVQRNGAVAHVPPPRPK 123
           KKIE++VGSKTVIQIRSHAQKYFLKVQ+NG +AHVPPPRPK
Sbjct: 57  KKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTIAHVPPPRPK 97



 Score = 45.8 bits (107), Expect(2) = 3e-21
 Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 7/63 (11%)
 Frame = +2

Query: 224 HPYSRKSMKDA-------SIRPATLSCIASGFSIWDDSAVLVNTASSGSISSQDEYTHLH 382
           HPY +K+ K+           P++L+ +A G+S WDD+ +L+++ S G + SQDEY +LH
Sbjct: 102 HPYPQKAPKNVLAPLQAFMAYPSSLNSLAPGYSPWDDTPMLIHSPSGGIMLSQDEY-NLH 160

Query: 383 TFE 391
             E
Sbjct: 161 GVE 163


>gb|ABL63122.1| MYB transcription factor [Catharanthus roseus]
          Length = 287

 Score = 80.9 bits (198), Expect(2) = 5e-21
 Identities = 36/41 (87%), Positives = 40/41 (97%)
 Frame = +1

Query: 1   KKIEEYVGSKTVIQIRSHAQKYFLKVQRNGAVAHVPPPRPK 123
           KKIE++VGSKTVIQIRSHAQKYFLKVQ+NG +AHVPPPRPK
Sbjct: 64  KKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTIAHVPPPRPK 104



 Score = 45.1 bits (105), Expect(2) = 5e-21
 Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
 Frame = +2

Query: 224 HPYSRKSMKDASIR-------PATLSCIASGFSIWDDSAVLVNTASSGSISSQDEYTHLH 382
           HPY +K+ K+  +        P+ ++ +A G+  WDD+++LV+   SG + SQDEY +LH
Sbjct: 109 HPYPQKAPKNVLVPAQASIGYPSAVNSLAPGYPTWDDASLLVSVPPSGILPSQDEY-NLH 167

Query: 383 TFE 391
             E
Sbjct: 168 GAE 170


>ref|XP_002326327.1| predicted protein [Populus trichocarpa] gi|222833520|gb|EEE71997.1|
           predicted protein [Populus trichocarpa]
          Length = 260

 Score = 79.0 bits (193), Expect(2) = 8e-21
 Identities = 36/41 (87%), Positives = 39/41 (95%)
 Frame = +1

Query: 1   KKIEEYVGSKTVIQIRSHAQKYFLKVQRNGAVAHVPPPRPK 123
           KKIE++VGSKTVIQIRSHAQKYFLKVQ+NG  AHVPPPRPK
Sbjct: 56  KKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTSAHVPPPRPK 96



 Score = 46.2 bits (108), Expect(2) = 8e-21
 Identities = 21/63 (33%), Positives = 40/63 (63%), Gaps = 7/63 (11%)
 Frame = +2

Query: 224 HPYSRKSMKDASIR-------PATLSCIASGFSIWDDSAVLVNTASSGSISSQDEYTHLH 382
           HPY +K+ K+  +         ++++  A G+++WD+++VL+N+A+S  + SQDE  +LH
Sbjct: 101 HPYPQKASKNVLVPLPASMAYASSMNTFAPGYALWDETSVLINSATSKIMPSQDELPNLH 160

Query: 383 TFE 391
             E
Sbjct: 161 GAE 163


Top